RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 TMEM170BQ5T4T1 132 aa7.05□□□□□ -1.28
NEK9-205ENST00000555405 BAALCQ8WXS3 180 aa7.05□□□□□ -1.28
NEK9-205ENST00000555405 hDV102S1A0JD36 115 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
NEK9-205ENST00000555405 TEX43Q6ZNM6 134 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 STPG4Q8N801 248 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 PRO1933Q9H354 126 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 CHTOPQ9Y3Y2 248 aaKnown RBP7.04□□□□□ -1.28
NEK9-205ENST00000555405 A0A0J9YXV3 536 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 CCL18P55774 89 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 Q9HAA7 133 aa7.04□□□□□ -1.28
NEK9-205ENST00000555405 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 RBX1P62877 108 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 UBE2WQ96B02 151 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 TMEM141Q96I45 108 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 UBE2D4Q9Y2X8 147 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 LINC00269Q8N2A0 174 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 IGIPA6NJ69 53 aa7.03□□□□□ -1.28
NEK9-205ENST00000555405 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
NEK9-205ENST00000555405 K7EMI3 77 aa7.02□□□□□ -1.29
NEK9-205ENST00000555405 S100A12P80511 92 aa7.02□□□□□ -1.29
NEK9-205ENST00000555405 PMVKQ15126 192 aa7.02□□□□□ -1.29
NEK9-205ENST00000555405 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
NEK9-205ENST00000555405 XCL1P47992 114 aa7.02□□□□□ -1.29
NEK9-205ENST00000555405 LELP1Q5T871 98 aa7.02□□□□□ -1.29
NEK9-205ENST00000555405 HSBP1L1C9JCN9 74 aa7.01□□□□□ -1.29
NEK9-205ENST00000555405 PET117Q6UWS5 81 aa7.01□□□□□ -1.29
NEK9-205ENST00000555405 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
NEK9-205ENST00000555405 KLK5Q9Y337 293 aaPredicted RBP7.01□□□□□ -1.29
NEK9-205ENST00000555405 C2orf88Q9BSF0 95 aa7.01□□□□□ -1.29
NEK9-205ENST00000555405 VAMP8Q9BV40 100 aa7.01□□□□□ -1.29
NEK9-205ENST00000555405 NMUP48645 174 aa7□□□□□ -1.29
NEK9-205ENST00000555405 TMEM97Q5BJF2 176 aa7□□□□□ -1.29
NEK9-205ENST00000555405 SH2D6Q7Z4S9 175 aa7□□□□□ -1.29
NEK9-205ENST00000555405 ZNF664Q8N3J9 261 aa7□□□□□ -1.29
NEK9-205ENST00000555405 LINC00469Q8N7U9 141 aa7□□□□□ -1.29
NEK9-205ENST00000555405 M0R2N4 97 aa7□□□□□ -1.29
NEK9-205ENST00000555405 ODF1Q14990 250 aa7□□□□□ -1.29
NEK9-205ENST00000555405 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
NEK9-205ENST00000555405 C5orf38Q86SI9 138 aa7□□□□□ -1.29
NEK9-205ENST00000555405 C14orf144Q96I85 54 aa7□□□□□ -1.29
NEK9-205ENST00000555405 TIMM17AQ99595 171 aa7□□□□□ -1.29
NEK9-205ENST00000555405 SPANXA1Q9NS26 97 aa7□□□□□ -1.29
NEK9-205ENST00000555405 DPM2O94777 84 aa7□□□□□ -1.29
NEK9-205ENST00000555405 IGKCP01834 107 aa7□□□□□ -1.29
NEK9-205ENST00000555405 C15orf53Q8NAA6 179 aa7□□□□□ -1.29
NEK9-205ENST00000555405 CHAC1Q9BUX1 264 aa7□□□□□ -1.29
NEK9-205ENST00000555405 LINC00588Q9Y4M8 146 aa7□□□□□ -1.29
NEK9-205ENST00000555405 CDC42SE2Q9NRR3 84 aa6.99□□□□□ -1.29
NEK9-205ENST00000555405 TOMM7Q9P0U1 55 aa6.99□□□□□ -1.29
NEK9-205ENST00000555405 LINC01546A6NGU7 62 aa6.99□□□□□ -1.29
NEK9-205ENST00000555405 C11orf86A6NJI1 115 aa6.99□□□□□ -1.29
NEK9-205ENST00000555405 CRPP02741 224 aa6.99□□□□□ -1.29
NEK9-205ENST00000555405 TTTY13Q9BZ97 58 aa6.99□□□□□ -1.29
NEK9-205ENST00000555405 F8VRH5 84 aa6.98□□□□□ -1.29
NEK9-205ENST00000555405 SMAGPQ0VAQ4 97 aa6.98□□□□□ -1.29
NEK9-205ENST00000555405 SPATA45Q537H7 98 aa6.98□□□□□ -1.29
NEK9-205ENST00000555405 TP73-AS1Q9UF72 201 aa6.98□□□□□ -1.29
NEK9-205ENST00000555405 MUC7Q8TAX7 377 aa6.98□□□□□ -1.29
NEK9-205ENST00000555405 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 LINC01545Q5VT33 79 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 SIVA1O15304 175 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 CCL25O15444 150 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 REG3AQ06141 175 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 LGALS9CQ6DKI2 356 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 LINC00518Q8N0U6 118 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 COX6A2Q02221 97 aa6.97□□□□□ -1.29
NEK9-205ENST00000555405 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.29
NEK9-205ENST00000555405 LY6G6CO95867 125 aa6.96□□□□□ -1.29
NEK9-205ENST00000555405 SMIM6P0DI80 62 aa6.96□□□□□ -1.29
NEK9-205ENST00000555405 PYGO1Q9Y3Y4 419 aa6.96□□□□□ -1.29
NEK9-205ENST00000555405 H3BNG1 76 aa6.96□□□□□ -1.3
NEK9-205ENST00000555405 ANKRD39Q53RE8 183 aa6.96□□□□□ -1.3
NEK9-205ENST00000555405 Q9H8V8 135 aa6.96□□□□□ -1.3
NEK9-205ENST00000555405 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
NEK9-205ENST00000555405 LINC01549A6NIU2 74 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 SS18Q15532 418 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 FAM104AQ969W3 186 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 LINC00526Q96FQ7 95 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
NEK9-205ENST00000555405 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
NEK9-205ENST00000555405 LINC00959A0A1B0GUT2 108 aa6.94□□□□□ -1.3
NEK9-205ENST00000555405 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
NEK9-205ENST00000555405 ZNF25P17030 456 aaPredicted RBP6.94□□□□□ -1.3
NEK9-205ENST00000555405 IGLV4-69A0A075B6H9 119 aa6.94□□□□□ -1.3
NEK9-205ENST00000555405 LECT2O14960 151 aa6.94□□□□□ -1.3
NEK9-205ENST00000555405 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
NEK9-205ENST00000555405 TRAV12-1A0A0B4J245 112 aa6.93□□□□□ -1.3
NEK9-205ENST00000555405 MALP21145 153 aa6.93□□□□□ -1.3
NEK9-205ENST00000555405 PLNP26678 52 aa6.93□□□□□ -1.3
NEK9-205ENST00000555405 UBE2D1P51668 147 aa6.93□□□□□ -1.3
NEK9-205ENST00000555405 CHCHD10Q8WYQ3 142 aaPredicted RBP6.93□□□□□ -1.3
NEK9-205ENST00000555405 AMELXQ99217 191 aa6.93□□□□□ -1.3
NEK9-205ENST00000555405 TIMM21Q9BVV7 248 aa6.93□□□□□ -1.3
NEK9-205ENST00000555405 IGKV2D-26A0A0A0MRZ7 120 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms