RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 BAGE3Q86Y29 109 aa9.59□□□□□ -0.87
CHD8-208ENST00000555301 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
CHD8-208ENST00000555301 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
CHD8-208ENST00000555301 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
CHD8-208ENST00000555301 COX11Q9Y6N1 276 aa9.59□□□□□ -0.87
CHD8-208ENST00000555301 ZNF664Q8N3J9 261 aa9.58□□□□□ -0.88
CHD8-208ENST00000555301 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
CHD8-208ENST00000555301 URB1-AS1Q96HZ7 61 aa9.58□□□□□ -0.88
CHD8-208ENST00000555301 TRAV8-4A0A0B4J246 113 aa9.57□□□□□ -0.88
CHD8-208ENST00000555301 NPSP0C0P6 89 aa9.57□□□□□ -0.88
CHD8-208ENST00000555301 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
CHD8-208ENST00000555301 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
CHD8-208ENST00000555301 TOMM6Q96B49 74 aa9.57□□□□□ -0.88
CHD8-208ENST00000555301 C1orf43Q9BWL3 253 aa9.57□□□□□ -0.88
CHD8-208ENST00000555301 IGKV2D-24A0A075B6R9 120 aa9.56□□□□□ -0.88
CHD8-208ENST00000555301 RTL8CO15255 209 aa9.56□□□□□ -0.88
CHD8-208ENST00000555301 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
CHD8-208ENST00000555301 LINC00336Q6ZUF6 198 aa9.56□□□□□ -0.88
CHD8-208ENST00000555301 PSCAO43653 123 aa9.55□□□□□ -0.88
CHD8-208ENST00000555301 Q6ZUT4 128 aa9.55□□□□□ -0.88
CHD8-208ENST00000555301 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
CHD8-208ENST00000555301 DNAH2Q9P225 4427 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 IGKV3OR2-268A0A0C4DH90 116 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 IGIPA6NJ69 53 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BKO60814 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HSBP1O75506 76 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HBDP02042 147 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BJP06899 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BOP23527 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BBP33778 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BDP58876 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BCP62807 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST2H2BEQ16778 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 PAPPA-AS1Q5QFB9 102 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.54□□□□□ -0.88
CHD8-208ENST00000555301 Q6ZN92 141 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 ERASQ7Z444 233 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BHQ93079 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 TMEM141Q96I45 108 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 SCGB3A1Q96QR1 104 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BNQ99877 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 HIST1H2BMQ99879 126 aa9.54□□□□□ -0.88
CHD8-208ENST00000555301 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
CHD8-208ENST00000555301 C1orf196B1AJZ1 125 aa9.53□□□□□ -0.88
CHD8-208ENST00000555301 CCL25O15444 150 aa9.53□□□□□ -0.88
CHD8-208ENST00000555301 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
CHD8-208ENST00000555301 A0A096LNJ9 63 aa9.52□□□□□ -0.89
CHD8-208ENST00000555301 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
CHD8-208ENST00000555301 SS18Q15532 418 aa9.52□□□□□ -0.89
CHD8-208ENST00000555301 RNASE13Q5GAN3 156 aaKnown RBP9.52□□□□□ -0.89
CHD8-208ENST00000555301 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
CHD8-208ENST00000555301 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
CHD8-208ENST00000555301 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
CHD8-208ENST00000555301 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
CHD8-208ENST00000555301 SERF1AO75920 110 aa9.51□□□□□ -0.89
CHD8-208ENST00000555301 PMCHL1Q16048 86 aa9.51□□□□□ -0.89
CHD8-208ENST00000555301 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
CHD8-208ENST00000555301 VCX2Q9H322 139 aa9.51□□□□□ -0.89
CHD8-208ENST00000555301 TRAV13-1A0A0B4J241 112 aa9.5□□□□□ -0.89
CHD8-208ENST00000555301 IFITM10A6NMD0 228 aa9.5□□□□□ -0.89
CHD8-208ENST00000555301 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
CHD8-208ENST00000555301 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
CHD8-208ENST00000555301 ATP5LO75964 103 aa9.49□□□□□ -0.89
CHD8-208ENST00000555301 LINC00310P59036 64 aa9.49□□□□□ -0.89
CHD8-208ENST00000555301 TNP2Q05952 138 aa9.49□□□□□ -0.89
CHD8-208ENST00000555301 PDZD11Q5EBL8 140 aa9.49□□□□□ -0.89
CHD8-208ENST00000555301 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
CHD8-208ENST00000555301 AMELXQ99217 191 aa9.49□□□□□ -0.89
CHD8-208ENST00000555301 GAGE12HA6NDE8 117 aa9.48□□□□□ -0.89
CHD8-208ENST00000555301 EREGO14944 169 aa9.48□□□□□ -0.89
CHD8-208ENST00000555301 A0A087WTM6 91 aa9.47□□□□□ -0.89
CHD8-208ENST00000555301 XCL1P47992 114 aa9.47□□□□□ -0.89
CHD8-208ENST00000555301 CD164L2Q6UWJ8 174 aa9.47□□□□□ -0.89
CHD8-208ENST00000555301 FAM19A2Q8N3H0 131 aa9.47□□□□□ -0.89
CHD8-208ENST00000555301 MAPKAPK5-AS1Q8N8E1 139 aa9.47□□□□□ -0.89
CHD8-208ENST00000555301 LRCOL1A6NCL2 159 aa9.46□□□□□ -0.9
CHD8-208ENST00000555301 NUPR1O60356 82 aa9.46□□□□□ -0.9
CHD8-208ENST00000555301 COA6Q5JTJ3 125 aaKnown RBP9.46□□□□□ -0.9
CHD8-208ENST00000555301 LINC00173Q6ZV60 143 aa9.46□□□□□ -0.9
CHD8-208ENST00000555301 BAALCQ8WXS3 180 aa9.46□□□□□ -0.9
CHD8-208ENST00000555301 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 DNAH17Q9UFH2 4485 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 UBE2D1P51668 147 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 SEC11AP67812 179 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 FOXI1Q12951 378 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 PMVKQ15126 192 aa9.45□□□□□ -0.9
CHD8-208ENST00000555301 NDUFA6P56556 154 aa9.44□□□□□ -0.9
CHD8-208ENST00000555301 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
CHD8-208ENST00000555301 CFAP161Q6P656 301 aa9.44□□□□□ -0.9
CHD8-208ENST00000555301 IFI27L1Q96BM0 104 aa9.44□□□□□ -0.9
CHD8-208ENST00000555301 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
CHD8-208ENST00000555301 C14orf177Q52M58 125 aa9.43□□□□□ -0.9
CHD8-208ENST00000555301 LINC00242Q5T6M2 205 aa9.43□□□□□ -0.9
CHD8-208ENST00000555301 FAM19A3Q7Z5A8 133 aa9.43□□□□□ -0.9
CHD8-208ENST00000555301 HSPB8Q9UJY1 196 aa9.43□□□□□ -0.9
CHD8-208ENST00000555301 FRAS1Q86XX4 4008 aa9.43□□□□□ -0.9
CHD8-208ENST00000555301 USP17L23D6RBM5 183 aa9.42□□□□□ -0.9
CHD8-208ENST00000555301 COX7A2LO14548 114 aa9.42□□□□□ -0.9
CHD8-208ENST00000555301 LECT2O14960 151 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms