RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 MUC4Q99102 2169 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 A8MTW9 85 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 TSPAN13O95857 204 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 TSHBP01222 138 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 IGHV3-30P01768 117 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 P0DMU3 169 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 IGHV3-30-5P0DP03 117 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 FOXI1Q12951 378 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 C9orf66Q5T8R8 295 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 C20orf203Q8NBC4 194 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 C4orf3Q8WVX3 66 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 PRO1854Q9UHT4 67 aa8.11□□□□□ -1.11
SRP54-205ENST00000554803 TMEM223A0PJW6 202 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 A8MWV9 139 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 INSL3P51460 131 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 ZNF56Q15929 161 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 SPAG8Q99932 426 aaPredicted RBP8.1□□□□□ -1.11
SRP54-205ENST00000554803 SPANXA1Q9NS26 97 aa8.1□□□□□ -1.11
SRP54-205ENST00000554803 TRAV12-3A0A0B4J271 114 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 J3KRW8 73 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 RHODO00212 210 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 AZU1P20160 251 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 EDN2P20800 178 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 SLURP1P55000 103 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 Q6ZQT7 251 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 COPS9Q8WXC6 57 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 RAX2Q96IS3 184 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 DNAJC30Q96LL9 226 aa8.09□□□□□ -1.11
SRP54-205ENST00000554803 F6UB75 175 aa8.08□□□□□ -1.12
SRP54-205ENST00000554803 SMAGPQ0VAQ4 97 aa8.08□□□□□ -1.12
SRP54-205ENST00000554803 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
SRP54-205ENST00000554803 TM2D3Q9BRN9 247 aa8.08□□□□□ -1.12
SRP54-205ENST00000554803 ABCA13Q86UQ4 5058 aa8.08□□□□□ -1.12
SRP54-205ENST00000554803 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
SRP54-205ENST00000554803 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
SRP54-205ENST00000554803 TIMM17BO60830 172 aa8.07□□□□□ -1.12
SRP54-205ENST00000554803 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
SRP54-205ENST00000554803 Q8N1Y9 231 aa8.07□□□□□ -1.12
SRP54-205ENST00000554803 AMELXQ99217 191 aa8.07□□□□□ -1.12
SRP54-205ENST00000554803 M0R2P5 195 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 CFC1BP0CG36 223 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 CFC1P0CG37 223 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 IFITM1P13164 125 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 PSMB2P49721 201 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 SYNJ2BPP57105 145 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
SRP54-205ENST00000554803 FHL3Q13643 280 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 ZNRF2Q8NHG8 242 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 SPXQ9BT56 116 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 PPDPFQ9H3Y8 114 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 SPANXCQ9NY87 97 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 ERG28Q9UKR5 140 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 SELENOKQ9Y6D0 94 aa8.06□□□□□ -1.12
SRP54-205ENST00000554803 IGLV4-3A0A075B6K6 122 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 A0A087WWL8 130 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 ZNF688P0C7X2 276 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 ZNF22P17026 224 aaPredicted RBP8.05□□□□□ -1.12
SRP54-205ENST00000554803 ZNF415Q09FC8 603 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 AMTNQ6UX39 209 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 TIMM21Q9BVV7 248 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 PEMTQ9UBM1 199 aa8.05□□□□□ -1.12
SRP54-205ENST00000554803 AGRNO00468 2067 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 TRBV30A0A0K0K1B3 111 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 IGHV3-33P01772 117 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 RPL39P62891 51 aaKnown RBP8.04□□□□□ -1.12
SRP54-205ENST00000554803 ATXN8Q156A1 80 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 FAM74A4Q5TZK3 123 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 SH2D6Q7Z4S9 175 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 GTSF1LQ9H1H1 148 aa8.04□□□□□ -1.12
SRP54-205ENST00000554803 COX6CP09669 75 aa8.03□□□□□ -1.12
SRP54-205ENST00000554803 TMEM263Q8WUH6 116 aaKnown RBP8.03□□□□□ -1.12
SRP54-205ENST00000554803 TNFRSF18Q9Y5U5 241 aa8.03□□□□□ -1.12
SRP54-205ENST00000554803 IGKV3-7A0A075B6H7 116 aa8.02□□□□□ -1.13
SRP54-205ENST00000554803 IGHV1-58A0A0C4DH39 117 aa8.02□□□□□ -1.13
SRP54-205ENST00000554803 TCL1BO95988 128 aa8.02□□□□□ -1.13
SRP54-205ENST00000554803 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
SRP54-205ENST00000554803 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
SRP54-205ENST00000554803 A4D1N5 150 aa8.01□□□□□ -1.13
SRP54-205ENST00000554803 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
SRP54-205ENST00000554803 SMCPP49901 116 aaPredicted RBP8.01□□□□□ -1.13
SRP54-205ENST00000554803 TIRAPP58753 221 aa8.01□□□□□ -1.13
SRP54-205ENST00000554803 DEFB1P60022 68 aa8.01□□□□□ -1.13
SRP54-205ENST00000554803 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
SRP54-205ENST00000554803 IL17DQ8TAD2 202 aa8.01□□□□□ -1.13
SRP54-205ENST00000554803 JPT2Q9H910 190 aa8.01□□□□□ -1.13
SRP54-205ENST00000554803 TRAV25A0A0B4J276 109 aa8□□□□□ -1.13
SRP54-205ENST00000554803 H3BT86 120 aa8□□□□□ -1.13
SRP54-205ENST00000554803 SLC25A20O43772 301 aa8□□□□□ -1.13
SRP54-205ENST00000554803 SPINK13Q1W4C9 94 aa8□□□□□ -1.13
SRP54-205ENST00000554803 FAM19A3Q7Z5A8 133 aa8□□□□□ -1.13
SRP54-205ENST00000554803 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
SRP54-205ENST00000554803 IGHV3-53P01767 116 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms