RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TRPT1Q86TN4 253 aaKnown RBP4.36□□□□□ -1.71
VPS33B-203ENST00000554264 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 TTTY13Q9BZ97 58 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 GEMIN7Q9H840 131 aaKnown RBP4.36□□□□□ -1.71
VPS33B-203ENST00000554264 DAZ1Q9NQZ3 744 aaKnown RBP4.36□□□□□ -1.71
VPS33B-203ENST00000554264 TP53TG1Q9Y2A0 90 aa4.36□□□□□ -1.71
VPS33B-203ENST00000554264 KMT2CQ8NEZ4 4911 aaKnown RBP4.36□□□□□ -1.71
VPS33B-203ENST00000554264 AGRNO00468 2067 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 IGLV4-69A0A075B6H9 119 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 J3QQQ9 107 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 M0R2P5 195 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 DUSP14O95147 198 aaKnown RBP4.35□□□□□ -1.71
VPS33B-203ENST00000554264 IGHV3-30P01768 117 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 IGHV4-59P01825 116 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 COX6CP09669 75 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 IGHV3-30-5P0DP03 117 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
VPS33B-203ENST00000554264 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
VPS33B-203ENST00000554264 PSMB2P49721 201 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 DLX1P56177 255 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 ZFAND6Q6FIF0 208 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 Q6ZUT4 128 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 SH2D6Q7Z4S9 175 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 GPHB5Q86YW7 130 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 C14orf178Q8N769 122 aaPredicted RBP4.35□□□□□ -1.71
VPS33B-203ENST00000554264 PYGO1Q9Y3Y4 419 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 KIF25-AS1Q9Y6Z4 181 aa4.35□□□□□ -1.71
VPS33B-203ENST00000554264 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 H3BT86 120 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 TIMM17BO60830 172 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 IGHG2P01859 326 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 CFC1BP0CG36 223 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 CFC1P0CG37 223 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 RNASE3P12724 160 aaKnown RBP4.34□□□□□ -1.71
VPS33B-203ENST00000554264 IFITM1P13164 125 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 NANOS2P60321 138 aaKnown RBP4.34□□□□□ -1.71
VPS33B-203ENST00000554264 SNRPD3P62318 126 aaKnown RBP4.34□□□□□ -1.71
VPS33B-203ENST00000554264 AMTNQ6UX39 209 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 PTH2Q96A98 100 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 VPREB3Q9UKI3 123 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 ERG28Q9UKR5 140 aa4.34□□□□□ -1.71
VPS33B-203ENST00000554264 ZNF256Q9Y2P7 627 aaPredicted RBP4.34□□□□□ -1.71
VPS33B-203ENST00000554264 TMEM223A0PJW6 202 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 G3V318 75 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 I3L3M4 83 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 SLC25A20O43772 301 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 SNCGO76070 127 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 ACYP1P07311 99 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 CRYGDP07320 174 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 LINC00315P59091 139 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 PRB3Q04118 309 aaPredicted RBP4.33□□□□□ -1.72
VPS33B-203ENST00000554264 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 PRR9Q5T870 116 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 RPL39LQ96EH5 51 aaKnown RBP4.33□□□□□ -1.72
VPS33B-203ENST00000554264 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 RYR3Q15413 4870 aa4.33□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3-66A0A0C4DH42 116 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 TRBV10-2A0A0K0K1G8 114 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 GAGE12JA6NER3 117 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 TCL1BO95988 128 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3-33P01772 117 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 C20orf203Q8NBC4 194 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 RHPN1-AS1Q9BWJ2 59 aa4.32□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3OR16-8A0A075B7F1 116 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 TRAV2A0A0B4J234 112 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV3-16A0A0C4DH30 117 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 M0QY20 66 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 TSHBP01222 138 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 MRPS36P82909 103 aaKnown RBP4.31□□□□□ -1.72
VPS33B-203ENST00000554264 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 GAGE5Q13069 117 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 GAGE6Q13070 117 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 TMEM263Q8WUH6 116 aaKnown RBP4.31□□□□□ -1.72
VPS33B-203ENST00000554264 DNAJC30Q96LL9 226 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 AMELXQ99217 191 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 CMYA5Q8N3K9 4069 aa4.31□□□□□ -1.72
VPS33B-203ENST00000554264 IGHV1OR15-1A0A075B7D0 117 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 TRAV8-4A0A0B4J246 113 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 TINCRA0A1B0GVN0 87 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 A4D1N5 150 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 A6NDX4 124 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 C9JAW5 83 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 H3BMM0 161 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 XGP55808 180 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 CIRBPQ14011 172 aaKnown RBP4.3□□□□□ -1.72
VPS33B-203ENST00000554264 ZNF56Q15929 161 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 Q1RN00 199 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 LINC01620Q4KN68 170 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 DEFB121Q5J5C9 76 aa4.3□□□□□ -1.72
VPS33B-203ENST00000554264 DCANP1Q8TF63 244 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms