RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 GTSF1LQ9H1H1 148 aa3.52□□□□□ -1.85
VTI1B-202ENST00000553619 ICOSQ9Y6W8 199 aa3.52□□□□□ -1.85
VTI1B-202ENST00000553619 TENM1Q9UKZ4 2725 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 IGLV2-18A0A075B6J9 118 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 TRAV26-1A0A087WT03 109 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 DEFB131BA0A096LNP1 70 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 GAGE12JA6NER3 117 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 H7C423 109 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 GAS8-AS1O95177 125 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 LEPROTL1O95214 131 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 AMTP48728 403 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 TIRAPP58753 221 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 UBE2D3P61077 147 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 UBE2D2P62837 147 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 GAGE4Q13068 117 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 GAGE5Q13069 117 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 PAPPA-AS1Q5QFB9 102 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 NEGR1Q7Z3B1 354 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 C15orf53Q8NAA6 179 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 HSPB8Q9UJY1 196 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 CELA1Q9UNI1 258 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 CYSLTR1Q9Y271 337 aa3.51□□□□□ -1.85
VTI1B-202ENST00000553619 TRBV25-1A0A075B6N4 114 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 IGHV1-24A0A0C4DH33 117 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 A0A0J9YY99 117 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 UBE2L6O14933 153 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 ATP5LO75964 103 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 HBDP02042 147 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 P0DMU3 169 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 FAM231AP0DMU4 169 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 FAM231CP0DMU5 169 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 NANOS2P60321 138 aaKnown RBP3.5□□□□□ -1.85
VTI1B-202ENST00000553619 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-202ENST00000553619 DGAT2L7PQ6IED9 249 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 Q6ZTC4 211 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 HIST3H2BBQ8N257 126 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
VTI1B-202ENST00000553619 KLK5Q9Y337 293 aaPredicted RBP3.5□□□□□ -1.85
VTI1B-202ENST00000553619 TRRAPQ9Y4A5 3859 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TRAV8-6A0A0B4J262 113 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.49□□□□□ -1.85
VTI1B-202ENST00000553619 NUPR1O60356 82 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 FABP4P15090 132 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TCTAP57738 103 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 OCIAD2Q56VL3 154 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 PDZD11Q5EBL8 140 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 C2orf66Q6UXQ4 117 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 Q6ZN92 141 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 ERASQ7Z444 233 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 FAM19A2Q8N3H0 131 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 ZNF664Q8N3J9 261 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TOMM6Q96B49 74 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 URB1-AS1Q96HZ7 61 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TMEM141Q96I45 108 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TMEM101Q96IK0 257 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 SCGB3A1Q96QR1 104 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 MIEN1Q9BRT3 115 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 MAP1LC3CQ9BXW4 147 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 VCX2Q9H322 139 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 PRO1933Q9H354 126 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 PYGO1Q9Y3Y4 419 aa3.49□□□□□ -1.85
VTI1B-202ENST00000553619 TRBV6-8A0A0A6YYG3 113 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 IGHV3-38A0A0C4DH36 116 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 NUPR2A6NF83 97 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 TSHBP01222 138 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 PRSS1P07477 247 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-202ENST00000553619 LELP1Q5T871 98 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 AMMECR1LQ6DCA0 310 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 C20orf203Q8NBC4 194 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 IFI27L1Q96BM0 104 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 VSIG2Q96IQ7 327 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 TIMM17AQ99595 171 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 HIST1H2BLQ99880 126 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
VTI1B-202ENST00000553619 CSDC2Q9Y534 153 aaKnown RBP3.48□□□□□ -1.85
VTI1B-202ENST00000553619 A0A096LPF7 62 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 LOC100131303A0A0U1RQF7 123 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 A0A1B0GUV1 79 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 IGLL5B9A064 214 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 TMEM262E9PQX1 116 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 J3QR89 54 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 LINC00694P0DN24 101 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 CCL18P55774 89 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 PMCHL1Q16048 86 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 CEMP1Q6PRD7 247 aaPredicted RBP3.47□□□□□ -1.85
VTI1B-202ENST00000553619 CHCHD5Q9BSY4 110 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 CST9LQ9H4G1 147 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
VTI1B-202ENST00000553619 TRAV12-1A0A0B4J245 112 aa3.46□□□□□ -1.86
VTI1B-202ENST00000553619 SYS1-DBNDD2H3BUS1 97 aa3.46□□□□□ -1.86
VTI1B-202ENST00000553619 CCL25O15444 150 aa3.46□□□□□ -1.86
VTI1B-202ENST00000553619 KRTDAPP60985 99 aa3.46□□□□□ -1.86
VTI1B-202ENST00000553619 SEC11AP67812 179 aa3.46□□□□□ -1.86
VTI1B-202ENST00000553619 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms