RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 M0QXV9 152 aa8.02□□□□□ -1.13
PRPF39-204ENST00000553605 RPS20P60866 119 aaKnown RBP8.02□□□□□ -1.13
PRPF39-204ENST00000553605 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
PRPF39-204ENST00000553605 RPL39LQ96EH5 51 aaKnown RBP8.02□□□□□ -1.13
PRPF39-204ENST00000553605 MAP1LC3BQ9GZQ8 125 aa8.02□□□□□ -1.13
PRPF39-204ENST00000553605 SCO2A0A1W2PP80 73 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 G3V3Q6 166 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 PAGE4O60829 102 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 AKR1C8PQ5T2L2 129 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 LINC00173Q6ZV60 143 aa8.01□□□□□ -1.13
PRPF39-204ENST00000553605 MRPL35Q9NZE8 188 aaKnown RBP8.01□□□□□ -1.13
PRPF39-204ENST00000553605 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 KRTAP9-7A8MTY7 169 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 PMCHP20382 165 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 DEFA1P59665 94 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 GAGE2EQ4V326 116 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 RPL7L1Q6DKI1 246 aaKnown RBP8□□□□□ -1.13
PRPF39-204ENST00000553605 LYZL1Q6UWQ5 148 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 C5orf38Q86SI9 138 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
PRPF39-204ENST00000553605 I3L3M4 83 aa7.99□□□□□ -1.13
PRPF39-204ENST00000553605 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
PRPF39-204ENST00000553605 TMUB2Q71RG4 321 aa7.99□□□□□ -1.13
PRPF39-204ENST00000553605 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
PRPF39-204ENST00000553605 MRAP2Q96G30 205 aa7.98□□□□□ -1.13
PRPF39-204ENST00000553605 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
PRPF39-204ENST00000553605 PPDPFQ9H3Y8 114 aa7.98□□□□□ -1.13
PRPF39-204ENST00000553605 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
PRPF39-204ENST00000553605 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
PRPF39-204ENST00000553605 TWIST1Q15672 202 aa7.97□□□□□ -1.13
PRPF39-204ENST00000553605 TMEM241Q24JQ0 296 aa7.97□□□□□ -1.13
PRPF39-204ENST00000553605 ALG5Q9Y673 324 aa7.97□□□□□ -1.13
PRPF39-204ENST00000553605 F8WDY8 70 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 NDUFA1O15239 70 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 TSHBP01222 138 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 IFNA1P01562 189 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 ASB16-AS1Q495Z4 193 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 C10orf25Q5T742 122 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 LINC00304Q8N9R0 145 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 MARVELD1Q9BSK0 173 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 SMDT1Q9H4I9 107 aa7.96□□□□□ -1.14
PRPF39-204ENST00000553605 PFDN1O60925 122 aa7.95□□□□□ -1.14
PRPF39-204ENST00000553605 RPL35P42766 123 aaKnown RBP7.95□□□□□ -1.14
PRPF39-204ENST00000553605 C9orf62Q8N4C0 152 aa7.95□□□□□ -1.14
PRPF39-204ENST00000553605 TRAV13-1A0A0B4J241 112 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 NUPR1O60356 82 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 TEX261Q6UWH6 196 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 UNQ6190/PRO20217Q6UXQ8 127 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 ORAOV1Q8WV07 137 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 CTDSP1Q9GZU7 261 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 TMEM242Q9NWH2 141 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 ANAPC11Q9NYG5 84 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
PRPF39-204ENST00000553605 FAM210AQ96ND0 272 aa7.93□□□□□ -1.14
PRPF39-204ENST00000553605 TRBV6-5A0A0K0K1A5 114 aa7.92□□□□□ -1.14
PRPF39-204ENST00000553605 CTRLP40313 264 aa7.92□□□□□ -1.14
PRPF39-204ENST00000553605 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
PRPF39-204ENST00000553605 RNASE13Q5GAN3 156 aaKnown RBP7.92□□□□□ -1.14
PRPF39-204ENST00000553605 LINC00337Q8N6G1 96 aa7.92□□□□□ -1.14
PRPF39-204ENST00000553605 CNFNQ9BYD5 112 aa7.92□□□□□ -1.14
PRPF39-204ENST00000553605 C7orf77A4D0Y5 90 aa7.91□□□□□ -1.14
PRPF39-204ENST00000553605 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.91□□□□□ -1.14
PRPF39-204ENST00000553605 FOXA3P55318 350 aaPredicted RBP7.91□□□□□ -1.14
PRPF39-204ENST00000553605 A0A1B0GV50 99 aa7.9□□□□□ -1.14
PRPF39-204ENST00000553605 CTAG1AP78358 180 aa7.9□□□□□ -1.14
PRPF39-204ENST00000553605 CENPWQ5EE01 88 aa7.9□□□□□ -1.14
PRPF39-204ENST00000553605 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.14
PRPF39-204ENST00000553605 LCE2CQ5TA81 110 aa7.9□□□□□ -1.14
PRPF39-204ENST00000553605 SMIM15Q7Z3B0 74 aa7.9□□□□□ -1.14
PRPF39-204ENST00000553605 SFT2D1Q8WV19 159 aa7.9□□□□□ -1.14
PRPF39-204ENST00000553605 RNASE7Q9H1E1 156 aaKnown RBP7.9□□□□□ -1.14
PRPF39-204ENST00000553605 CSDC2Q9Y534 153 aaKnown RBP7.9□□□□□ -1.14
PRPF39-204ENST00000553605 Q5BKY6 102 aa7.89□□□□□ -1.15
PRPF39-204ENST00000553605 ST20Q9HBF5 79 aa7.89□□□□□ -1.15
PRPF39-204ENST00000553605 CYTL1Q9NRR1 136 aa7.89□□□□□ -1.15
PRPF39-204ENST00000553605 UPK1BO75841 260 aa7.88□□□□□ -1.15
PRPF39-204ENST00000553605 CFC1BP0CG36 223 aa7.88□□□□□ -1.15
PRPF39-204ENST00000553605 SEC61BP60468 96 aaKnown RBP7.88□□□□□ -1.15
PRPF39-204ENST00000553605 KCNRGQ8N5I3 272 aa7.88□□□□□ -1.15
PRPF39-204ENST00000553605 UBE2D4Q9Y2X8 147 aa7.88□□□□□ -1.15
PRPF39-204ENST00000553605 C22orf24Q9Y442 160 aa7.88□□□□□ -1.15
PRPF39-204ENST00000553605 NDUFC2-KCTD14E9PQ53 114 aa7.87□□□□□ -1.15
PRPF39-204ENST00000553605 POLR2KP53803 58 aaKnown RBP7.87□□□□□ -1.15
PRPF39-204ENST00000553605 IFITM3Q01628 133 aa7.87□□□□□ -1.15
PRPF39-204ENST00000553605 SMAGPQ0VAQ4 97 aa7.87□□□□□ -1.15
PRPF39-204ENST00000553605 LBHQ53QV2 105 aaPredicted RBP7.87□□□□□ -1.15
PRPF39-204ENST00000553605 LINC00242Q5T6M2 205 aa7.87□□□□□ -1.15
PRPF39-204ENST00000553605 MBD3L1Q8WWY6 194 aa7.87□□□□□ -1.15
PRPF39-204ENST00000553605 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
PRPF39-204ENST00000553605 BCE1O60756 84 aa7.86□□□□□ -1.15
PRPF39-204ENST00000553605 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
PRPF39-204ENST00000553605 SMIM12Q96EX1 92 aa7.86□□□□□ -1.15
PRPF39-204ENST00000553605 IGKV2D-26A0A0A0MRZ7 120 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 IGHV3OR16-9A0A0B4J2B5 98 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
PRPF39-204ENST00000553605 GNG4P50150 75 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms