RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 M0R2N4 97 aa13.04□□□□□ -0.32
PSEN1-207ENST00000553599 HBDP02042 147 aa13.04□□□□□ -0.32
PSEN1-207ENST00000553599 CRPP02741 224 aa13.04□□□□□ -0.32
PSEN1-207ENST00000553599 NFE4Q86UQ8 179 aa13.04□□□□□ -0.32
PSEN1-207ENST00000553599 ZNF664Q8N3J9 261 aa13.04□□□□□ -0.32
PSEN1-207ENST00000553599 CDC42SE2Q9NRR3 84 aa13.04□□□□□ -0.32
PSEN1-207ENST00000553599 KMT2CQ8NEZ4 4911 aaKnown RBP13.03□□□□□ -0.32
PSEN1-207ENST00000553599 HSBP1O75506 76 aa13.03□□□□□ -0.32
PSEN1-207ENST00000553599 LINC00269Q8N2A0 174 aa13.03□□□□□ -0.32
PSEN1-207ENST00000553599 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
PSEN1-207ENST00000553599 SACSQ9NZJ4 4579 aa13.03□□□□□ -0.32
PSEN1-207ENST00000553599 DNAH6Q9C0G6 4158 aa13.03□□□□□ -0.32
PSEN1-207ENST00000553599 SERF1AO75920 110 aa13.02□□□□□ -0.33
PSEN1-207ENST00000553599 REG3AQ06141 175 aa13.02□□□□□ -0.33
PSEN1-207ENST00000553599 MIAQ16674 131 aa13.02□□□□□ -0.33
PSEN1-207ENST00000553599 PAPPA-AS1Q5QFB9 102 aa13.02□□□□□ -0.33
PSEN1-207ENST00000553599 ERASQ7Z444 233 aa13.02□□□□□ -0.33
PSEN1-207ENST00000553599 UBE2WQ96B02 151 aa13.02□□□□□ -0.33
PSEN1-207ENST00000553599 IGIPA6NJ69 53 aa13.01□□□□□ -0.33
PSEN1-207ENST00000553599 RMI2Q96E14 147 aa13.01□□□□□ -0.33
PSEN1-207ENST00000553599 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
PSEN1-207ENST00000553599 A0A096LNJ9 63 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
PSEN1-207ENST00000553599 C1orf134Q5TEV5 83 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 ENHOQ6UWT2 76 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 C6orf223Q8N319 242 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 SCGB3A1Q96QR1 104 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 COX11Q9Y6N1 276 aa13□□□□□ -0.33
PSEN1-207ENST00000553599 KMT2AQ03164 3969 aa12.99□□□□□ -0.33
PSEN1-207ENST00000553599 CCL25O15444 150 aa12.99□□□□□ -0.33
PSEN1-207ENST00000553599 LINC00310P59036 64 aa12.99□□□□□ -0.33
PSEN1-207ENST00000553599 Q6ZN92 141 aa12.99□□□□□ -0.33
PSEN1-207ENST00000553599 IGLV4-3A0A075B6K6 122 aa12.98□□□□□ -0.33
PSEN1-207ENST00000553599 Q6ZUT4 128 aa12.98□□□□□ -0.33
PSEN1-207ENST00000553599 TM2D2Q9BX73 214 aa12.98□□□□□ -0.33
PSEN1-207ENST00000553599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-207ENST00000553599 ATP5LO75964 103 aa12.97□□□□□ -0.33
PSEN1-207ENST00000553599 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
PSEN1-207ENST00000553599 FAM104AQ969W3 186 aa12.97□□□□□ -0.33
PSEN1-207ENST00000553599 Q9HAA7 133 aa12.97□□□□□ -0.33
PSEN1-207ENST00000553599 PMCHL1Q16048 86 aa12.96□□□□□ -0.33
PSEN1-207ENST00000553599 TEX43Q6ZNM6 134 aa12.96□□□□□ -0.33
PSEN1-207ENST00000553599 C1orf43Q9BWL3 253 aa12.96□□□□□ -0.33
PSEN1-207ENST00000553599 VCX2Q9H322 139 aa12.96□□□□□ -0.33
PSEN1-207ENST00000553599 CLPSL2Q6UWE3 100 aa12.95□□□□□ -0.34
PSEN1-207ENST00000553599 AMELXQ99217 191 aa12.95□□□□□ -0.34
PSEN1-207ENST00000553599 OPRPNQ99935 248 aaPredicted RBP12.95□□□□□ -0.34
PSEN1-207ENST00000553599 RYR2Q92736 4967 aa12.95□□□□□ -0.34
PSEN1-207ENST00000553599 LINC00959A0A1B0GUT2 108 aa12.94□□□□□ -0.34
PSEN1-207ENST00000553599 NUPR1O60356 82 aa12.94□□□□□ -0.34
PSEN1-207ENST00000553599 NDUFA6P56556 154 aa12.94□□□□□ -0.34
PSEN1-207ENST00000553599 SS18Q15532 418 aa12.94□□□□□ -0.34
PSEN1-207ENST00000553599 FAM19A2Q8N3H0 131 aa12.94□□□□□ -0.34
PSEN1-207ENST00000553599 C2orf88Q9BSF0 95 aa12.94□□□□□ -0.34
PSEN1-207ENST00000553599 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
PSEN1-207ENST00000553599 IGKV2D-24A0A075B6R9 120 aa12.93□□□□□ -0.34
PSEN1-207ENST00000553599 IGKV3OR2-268A0A0C4DH90 116 aa12.92□□□□□ -0.34
PSEN1-207ENST00000553599 IFITM10A6NMD0 228 aa12.92□□□□□ -0.34
PSEN1-207ENST00000553599 RNASE13Q5GAN3 156 aaKnown RBP12.92□□□□□ -0.34
PSEN1-207ENST00000553599 Q6ZRN7 208 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-207ENST00000553599 PACRGQ96M98 296 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-207ENST00000553599 LEPROTL1O95214 131 aa12.91□□□□□ -0.34
PSEN1-207ENST00000553599 TRAV13-1A0A0B4J241 112 aa12.9□□□□□ -0.34
PSEN1-207ENST00000553599 PSCAO43653 123 aa12.9□□□□□ -0.34
PSEN1-207ENST00000553599 S100A6P06703 90 aa12.9□□□□□ -0.34
PSEN1-207ENST00000553599 PMVKQ15126 192 aa12.9□□□□□ -0.34
PSEN1-207ENST00000553599 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
PSEN1-207ENST00000553599 CHCHD10Q8WYQ3 142 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-207ENST00000553599 HSPB8Q9UJY1 196 aa12.9□□□□□ -0.34
PSEN1-207ENST00000553599 BAALCQ8WXS3 180 aa12.89□□□□□ -0.35
PSEN1-207ENST00000553599 IFI27L1Q96BM0 104 aa12.89□□□□□ -0.35
PSEN1-207ENST00000553599 IGLV10-54A0A075B6I4 117 aa12.88□□□□□ -0.35
PSEN1-207ENST00000553599 SEC11AP67812 179 aa12.88□□□□□ -0.35
PSEN1-207ENST00000553599 CD164L2Q6UWJ8 174 aa12.88□□□□□ -0.35
PSEN1-207ENST00000553599 CST9LQ9H4G1 147 aa12.88□□□□□ -0.35
PSEN1-207ENST00000553599 RTL8CO15255 209 aa12.87□□□□□ -0.35
PSEN1-207ENST00000553599 UBE2D1P51668 147 aa12.87□□□□□ -0.35
PSEN1-207ENST00000553599 KRTAP26-1Q6PEX3 210 aa12.87□□□□□ -0.35
PSEN1-207ENST00000553599 LINC00336Q6ZUF6 198 aa12.87□□□□□ -0.35
PSEN1-207ENST00000553599 FAM19A3Q7Z5A8 133 aa12.87□□□□□ -0.35
PSEN1-207ENST00000553599 TRAV12-1A0A0B4J245 112 aa12.85□□□□□ -0.35
PSEN1-207ENST00000553599 GAGE12HA6NDE8 117 aa12.85□□□□□ -0.35
PSEN1-207ENST00000553599 PRSS1P07477 247 aa12.85□□□□□ -0.35
PSEN1-207ENST00000553599 XCL1P47992 114 aa12.85□□□□□ -0.35
PSEN1-207ENST00000553599 PRSS29PA6NIE9 313 aa12.84□□□□□ -0.35
PSEN1-207ENST00000553599 FABP4P15090 132 aa12.84□□□□□ -0.35
PSEN1-207ENST00000553599 LINC00242Q5T6M2 205 aa12.84□□□□□ -0.35
PSEN1-207ENST00000553599 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
PSEN1-207ENST00000553599 FOXI1Q12951 378 aa12.83□□□□□ -0.36
PSEN1-207ENST00000553599 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
PSEN1-207ENST00000553599 HERVK_113P63121 156 aa12.82□□□□□ -0.36
PSEN1-207ENST00000553599 MAP1LC3CQ9BXW4 147 aa12.82□□□□□ -0.36
PSEN1-207ENST00000553599 RYR3Q15413 4870 aa12.81□□□□□ -0.36
PSEN1-207ENST00000553599 IGHV3OR16-9A0A0B4J2B5 98 aa12.81□□□□□ -0.36
PSEN1-207ENST00000553599 TINCRA0A1B0GVN0 87 aa12.81□□□□□ -0.36
PSEN1-207ENST00000553599 CFAP161Q6P656 301 aa12.81□□□□□ -0.36
PSEN1-207ENST00000553599 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
PSEN1-207ENST00000553599 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
PSEN1-207ENST00000553599 COX7A2LO14548 114 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms