RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 MAP1LC3B2A6NCE7 125 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 FAM231BA6NCW3 169 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 HMGB3O15347 200 aaKnown RBP4.3□□□□□ -1.72
LETMD1-236ENST00000553043 BCL2L11O43521 198 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 SH2D1AO60880 128 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 BLOC1S1P78537 153 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 C11orf52Q96A22 123 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 MAP1LC3BQ9GZQ8 125 aa4.3□□□□□ -1.72
LETMD1-236ENST00000553043 A0A087WX48 190 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 TRAV8-4A0A0B4J246 113 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 F2Z2F3 143 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 H3BVH4 76 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 H7C1H1 209 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 DLEU1O43261 78 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 P01737 135 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 RAB5AP20339 215 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 SRSF3P84103 164 aaKnown RBP4.29□□□□□ -1.72
LETMD1-236ENST00000553043 Q8N3U1 123 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 PGLYRP4Q96LB8 373 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 MANBALQ9NQG1 85 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 KIF25-AS1Q9Y6Z4 181 aa4.29□□□□□ -1.72
LETMD1-236ENST00000553043 FXYD6-FXYD2A0A087WZ82 144 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 PANO1I0J062 215 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 M0R143 59 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 GAGE4Q13068 117 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 GAGE5Q13069 117 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 CIRBPQ14011 172 aaKnown RBP4.28□□□□□ -1.72
LETMD1-236ENST00000553043 IQCJQ1A5X6 159 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 ALKAL2Q6UX46 152 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 FAM19A1Q7Z5A9 133 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 C14orf178Q8N769 122 aaPredicted RBP4.28□□□□□ -1.72
LETMD1-236ENST00000553043 ZNF471Q9BX82 626 aaPredicted RBP4.28□□□□□ -1.72
LETMD1-236ENST00000553043 SAMD10Q9BYL1 202 aa4.28□□□□□ -1.72
LETMD1-236ENST00000553043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.28□□□□□ -1.72
LETMD1-236ENST00000553043 IGHV3-73A0A0B4J1V6 119 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 H7C423 109 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 ARPC5O15511 151 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 PDE6DO43924 150 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 IGLC6P0CF74 106 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 AKR1C3P42330 323 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
LETMD1-236ENST00000553043 CACNG7P62955 275 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 RIGQ13278 110 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 BAGE2Q86Y30 109 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 C9orf163Q8N9P6 203 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 NEXN-AS1Q8NBZ9 246 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 AP1S3Q96PC3 154 aa4.27□□□□□ -1.73
LETMD1-236ENST00000553043 TRBV25-1A0A075B6N4 114 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 IGKV2D-24A0A075B6R9 120 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 TINCRA0A1B0GVN0 87 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 CRPP02741 224 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 CCL20P78556 96 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 CD164Q04900 197 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 TMEM241Q24JQ0 296 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 PYY3Q5JQD4 70 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 ENHOQ6UWT2 76 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 BTF3L4Q96K17 158 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 JPT2Q9H910 190 aa4.26□□□□□ -1.73
LETMD1-236ENST00000553043 C19orf71A6NCJ1 209 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 M0QY20 66 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 M0R381 172 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 TRGC1P0CF51 173 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 SMIM17P0DL12 118 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 SULT1A2P50226 295 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 RPL32P62910 135 aaKnown RBP4.25□□□□□ -1.73
LETMD1-236ENST00000553043 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
LETMD1-236ENST00000553043 JOSD1Q15040 202 aaPredicted RBP4.25□□□□□ -1.73
LETMD1-236ENST00000553043 COA6Q5JTJ3 125 aaKnown RBP4.25□□□□□ -1.73
LETMD1-236ENST00000553043 FAM74A4Q5TZK3 123 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 SPANXN1Q5VSR9 72 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 CBLN2Q8IUK8 224 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 DPH3Q96FX2 82 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 TMEM242Q9NWH2 141 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 Q9UF83 564 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 KLK12Q9UKR0 248 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 PKIGQ9Y2B9 76 aa4.25□□□□□ -1.73
LETMD1-236ENST00000553043 A0A087WZ39 114 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 IGHV1-24A0A0C4DH33 117 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 PHOX2AO14813 284 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 NCR2O95944 276 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 KRTAP26-1Q6PEX3 210 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 Q6ZVQ6 151 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
LETMD1-236ENST00000553043 OR10AG1Q8NH19 301 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 MAP1LC3AQ9H492 121 aa4.24□□□□□ -1.73
LETMD1-236ENST00000553043 GRIFINA4D1Z8 144 aa4.23□□□□□ -1.73
LETMD1-236ENST00000553043 IFNA1P01562 189 aa4.23□□□□□ -1.73
LETMD1-236ENST00000553043 ADCYAP1P18509 176 aa4.23□□□□□ -1.73
LETMD1-236ENST00000553043 CTRLP40313 264 aa4.23□□□□□ -1.73
LETMD1-236ENST00000553043 FOXA3P55318 350 aaPredicted RBP4.23□□□□□ -1.73
LETMD1-236ENST00000553043 MEF2BQ02080 365 aaPredicted RBP4.23□□□□□ -1.73
LETMD1-236ENST00000553043 ZNF56Q15929 161 aa4.23□□□□□ -1.73
LETMD1-236ENST00000553043 MPV17L2Q567V2 206 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms