RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
PRPF40B-216ENST00000552301 C10orf91Q5T1B1 145 aa12.18□□□□□ -0.46
PRPF40B-216ENST00000552301 USP17L23D6RBM5 183 aa12.17□□□□□ -0.46
PRPF40B-216ENST00000552301 CLRN3Q8NCR9 226 aa12.17□□□□□ -0.46
PRPF40B-216ENST00000552301 RPS10P5Q9NQ39 176 aa12.17□□□□□ -0.46
PRPF40B-216ENST00000552301 LAMTOR2Q9Y2Q5 125 aa12.17□□□□□ -0.46
PRPF40B-216ENST00000552301 LRP1BQ9NZR2 4599 aa12.16□□□□□ -0.46
PRPF40B-216ENST00000552301 RYR1P21817 5038 aa12.16□□□□□ -0.46
PRPF40B-216ENST00000552301 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
PRPF40B-216ENST00000552301 MAP1LC3AQ9H492 121 aa12.16□□□□□ -0.46
PRPF40B-216ENST00000552301 RAB5AP20339 215 aa12.15□□□□□ -0.46
PRPF40B-216ENST00000552301 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
PRPF40B-216ENST00000552301 DNAH5Q8TE73 4624 aa12.15□□□□□ -0.47
PRPF40B-216ENST00000552301 APOC3P02656 99 aa12.14□□□□□ -0.47
PRPF40B-216ENST00000552301 KRTAP26-1Q6PEX3 210 aa12.14□□□□□ -0.47
PRPF40B-216ENST00000552301 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
PRPF40B-216ENST00000552301 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
PRPF40B-216ENST00000552301 GAGE12HA6NDE8 117 aa12.12□□□□□ -0.47
PRPF40B-216ENST00000552301 SNAPINO95295 136 aa12.12□□□□□ -0.47
PRPF40B-216ENST00000552301 SVBPQ8N300 66 aa12.12□□□□□ -0.47
PRPF40B-216ENST00000552301 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
PRPF40B-216ENST00000552301 SS18Q15532 418 aa12.11□□□□□ -0.47
PRPF40B-216ENST00000552301 COX19Q49B96 90 aa12.11□□□□□ -0.47
PRPF40B-216ENST00000552301 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
PRPF40B-216ENST00000552301 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
PRPF40B-216ENST00000552301 CSDC2Q9Y534 153 aaKnown RBP12.11□□□□□ -0.47
PRPF40B-216ENST00000552301 ABCA13Q86UQ4 5058 aa12.1□□□□□ -0.47
PRPF40B-216ENST00000552301 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
PRPF40B-216ENST00000552301 LINC00959A0A1B0GUT2 108 aa12.09□□□□□ -0.47
PRPF40B-216ENST00000552301 XCL1P47992 114 aa12.09□□□□□ -0.47
PRPF40B-216ENST00000552301 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
PRPF40B-216ENST00000552301 hDV102S1A0JD36 115 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 PRSS47A8MTI9 375 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 PRSS1P07477 247 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 RPL39P62891 51 aaKnown RBP12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 Q6ZUT4 128 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 Q8N8P6 123 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 GNB1LQ9BYB4 327 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
PRPF40B-216ENST00000552301 CCL25O15444 150 aa12.07□□□□□ -0.48
PRPF40B-216ENST00000552301 MT-ND6P03923 174 aa12.07□□□□□ -0.48
PRPF40B-216ENST00000552301 KIAA1644Q3SXP7 199 aa12.07□□□□□ -0.48
PRPF40B-216ENST00000552301 RNASE13Q5GAN3 156 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-216ENST00000552301 NXT2Q9NPJ8 142 aaKnown RBP12.07□□□□□ -0.48
PRPF40B-216ENST00000552301 LINC01620Q4KN68 170 aa12.06□□□□□ -0.48
PRPF40B-216ENST00000552301 HSPG2P98160 4391 aa12.06□□□□□ -0.48
PRPF40B-216ENST00000552301 TRAV13-1A0A0B4J241 112 aa12.05□□□□□ -0.48
PRPF40B-216ENST00000552301 IFI27P40305 119 aaPredicted RBP12.05□□□□□ -0.48
PRPF40B-216ENST00000552301 C1orf196B1AJZ1 125 aa12.04□□□□□ -0.48
PRPF40B-216ENST00000552301 K7EMI3 77 aa12.04□□□□□ -0.48
PRPF40B-216ENST00000552301 FOXI1Q12951 378 aa12.04□□□□□ -0.48
PRPF40B-216ENST00000552301 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
PRPF40B-216ENST00000552301 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
PRPF40B-216ENST00000552301 CD164L2Q6UWJ8 174 aa12.03□□□□□ -0.48
PRPF40B-216ENST00000552301 MRPL18Q9H0U6 180 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-216ENST00000552301 CYSLTR1Q9Y271 337 aa12.03□□□□□ -0.48
PRPF40B-216ENST00000552301 APOBP04114 4563 aaKnown RBP12.03□□□□□ -0.48
PRPF40B-216ENST00000552301 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.02□□□□□ -0.49
PRPF40B-216ENST00000552301 TGIF2-C20orf24A0A0A6YYL0 155 aa12.02□□□□□ -0.49
PRPF40B-216ENST00000552301 XGP55808 180 aa12.02□□□□□ -0.49
PRPF40B-216ENST00000552301 MRPS36P82909 103 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-216ENST00000552301 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
PRPF40B-216ENST00000552301 HIGD2BQ4VC39 106 aa12.01□□□□□ -0.49
PRPF40B-216ENST00000552301 PRSS3P2Q8NHM4 247 aa12.01□□□□□ -0.49
PRPF40B-216ENST00000552301 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 IFITM10A6NMD0 228 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 MALP21145 153 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 G0S2P27469 103 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 CNBPP62633 177 aaKnown RBP12□□□□□ -0.49
PRPF40B-216ENST00000552301 HAMPP81172 84 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 C2orf66Q6UXQ4 117 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 FAM30AQ9NZY2 134 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
PRPF40B-216ENST00000552301 COX7A2LO14548 114 aa11.99□□□□□ -0.49
PRPF40B-216ENST00000552301 Q8N1X5 172 aa11.99□□□□□ -0.49
PRPF40B-216ENST00000552301 C9orf163Q8N9P6 203 aa11.99□□□□□ -0.49
PRPF40B-216ENST00000552301 OPRPNQ99935 248 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-216ENST00000552301 ALKBH7Q9BT30 221 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-216ENST00000552301 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-216ENST00000552301 Q6ZN92 141 aa11.98□□□□□ -0.49
PRPF40B-216ENST00000552301 Q6ZSA8 131 aa11.98□□□□□ -0.49
PRPF40B-216ENST00000552301 TMEM141Q96I45 108 aa11.98□□□□□ -0.49
PRPF40B-216ENST00000552301 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
PRPF40B-216ENST00000552301 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
PRPF40B-216ENST00000552301 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.49
PRPF40B-216ENST00000552301 TEX43Q6ZNM6 134 aa11.96□□□□□ -0.49
PRPF40B-216ENST00000552301 FA2HQ7L5A8 372 aa11.96□□□□□ -0.49
PRPF40B-216ENST00000552301 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.49
PRPF40B-216ENST00000552301 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
PRPF40B-216ENST00000552301 IGHV3-64A0A075B6Q5 118 aa11.95□□□□□ -0.5
PRPF40B-216ENST00000552301 ZNF561-AS1K7EIQ3 104 aa11.95□□□□□ -0.5
PRPF40B-216ENST00000552301 EPM2AB3EWF7 344 aa11.94□□□□□ -0.5
PRPF40B-216ENST00000552301 APOMO95445 188 aa11.94□□□□□ -0.5
PRPF40B-216ENST00000552301 PAPPA-AS1Q5QFB9 102 aa11.94□□□□□ -0.5
PRPF40B-216ENST00000552301 C5orf38Q86SI9 138 aa11.94□□□□□ -0.5
PRPF40B-216ENST00000552301 FAM104AQ969W3 186 aa11.94□□□□□ -0.5
PRPF40B-216ENST00000552301 SMR3BP02814 79 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-216ENST00000552301 NPSP0C0P6 89 aa11.93□□□□□ -0.5
PRPF40B-216ENST00000552301 VCX2Q9H322 139 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms