RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 SLURP1P55000 103 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 GAGE2BQ13066 116 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 FHL3Q13643 280 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 GAGE2EQ4V326 116 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 C2orf82Q6UX34 121 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 STHQ8IWL8 128 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 NTN5Q8WTR8 489 aaPredicted RBP3.88□□□□□ -1.79
CCNT1-204ENST00000551989 C16orf74Q96GX8 76 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 TMEM101Q96IK0 257 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 IMUPQ9GZP8 106 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 GAGE2DQ9UEU5 116 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 X6R8D5 127 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 WDFY4Q6ZS81 3184 aa3.88□□□□□ -1.79
CCNT1-204ENST00000551989 PRRC2CQ9Y520 2896 aaKnown RBP3.88□□□□□ -1.79
CCNT1-204ENST00000551989 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 TRAV8-3A0A0A6YYJ7 113 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 TRAV13-2A0A0B4J235 113 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 MT-ATP8P03928 68 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 DEFB113Q30KQ7 82 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 C10orf99Q6UWK7 81 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 LINC00308Q8TCZ7 52 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 CDKN2A-AS1Q9UH64 79 aa3.87□□□□□ -1.79
CCNT1-204ENST00000551989 ZZEF1O43149 2961 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 AKAP6Q13023 2319 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.86□□□□□ -1.79
CCNT1-204ENST00000551989 IGHV3OR16-12A0A075B7B8 117 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 A0A0U1RRA0 63 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 TRBV6-4A0A1B0GX49 114 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 IGKV2-29A2NJV5 120 aaPredicted RBP3.86□□□□□ -1.79
CCNT1-204ENST00000551989 SMIM1B2RUZ4 78 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 H7C2G1 150 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 UBE2L6O14933 153 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 ATP5G1P05496 136 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 INAFM2P0DMQ5 153 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 LINC00242Q5T6M2 205 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 CD164L2Q6UWJ8 174 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 LINC01561Q8N1V8 128 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 TMEM243Q9BU79 118 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 Q9H8V8 135 aa3.86□□□□□ -1.79
CCNT1-204ENST00000551989 ZFHX2Q9C0A1 2572 aaPredicted RBP3.86□□□□□ -1.79
CCNT1-204ENST00000551989 IGHV3-73A0A0B4J1V6 119 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 HTN1P15515 57 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 ODF3L2Q3SX64 289 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 TTC32Q5I0X7 151 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 MEIG1Q5JSS6 88 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 ADAMTSL4-AS1Q5T5F5 129 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 SERTAD4-AS1Q5TG53 156 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 DAND5Q8N907 189 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 MRAPQ8TCY5 172 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
CCNT1-204ENST00000551989 CDC42SE2Q9NRR3 84 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 HRNRQ86YZ3 2850 aaPredicted RBP3.85□□□□□ -1.79
CCNT1-204ENST00000551989 MGAQ8IWI9 3026 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 MUC3AQ02505 3323 aa3.85□□□□□ -1.79
CCNT1-204ENST00000551989 TRGV1A0A0A0MS02 117 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 H0YGX0 51 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 CRPP02741 224 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 RPL28P46779 137 aaKnown RBP3.84□□□□□ -1.79
CCNT1-204ENST00000551989 NDUFV3P56181 108 aaKnown RBP3.84□□□□□ -1.79
CCNT1-204ENST00000551989 PROK1P58294 105 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 GAGE5Q13069 117 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 GAGE6Q13070 117 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 CEMP1Q6PRD7 247 aaPredicted RBP3.84□□□□□ -1.79
CCNT1-204ENST00000551989 Q6ZSV7 163 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 PRIMA1Q86XR5 153 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 C1orf158Q8N1D5 194 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 C15orf53Q8NAA6 179 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 NRGNQ92686 78 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 C16orf95Q9H693 158 aa3.84□□□□□ -1.79
CCNT1-204ENST00000551989 NBEAQ8NFP9 2946 aa3.84□□□□□ -1.8
CCNT1-204ENST00000551989 IGHV3-38A0A0C4DH36 116 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 TEX49A0A1B0GTD5 131 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 A0A1B0GX51 115 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 IBA57-AS1B1ANH7 110 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 F5H768 121 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 CCL24O00175 119 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 CXCL5P42830 114 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 DEFB136Q30KP8 78 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 HIST2H2BCQ6DN03 193 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 HIST2H2BDQ6DRA6 164 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 Q6ZSN1 163 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 LINC00643Q86TS7 51 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 MUC7Q8TAX7 377 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 DEFB104AQ8WTQ1 72 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 XCL2Q9UBD3 114 aa3.83□□□□□ -1.8
CCNT1-204ENST00000551989 SPTAN1Q13813 2472 aaKnown RBP3.82□□□□□ -1.8
CCNT1-204ENST00000551989 NBASA2RRP1 2371 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 GAGE12JA6NER3 117 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 GAGE7O76087 117 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 GAGE12FP0CL80 117 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 GAGE12GP0CL81 117 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 GAGE12IP0CL82 117 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 LINC00694P0DN24 101 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 GAGE4Q13068 117 aa3.82□□□□□ -1.8
CCNT1-204ENST00000551989 RNASE13Q5GAN3 156 aaKnown RBP3.82□□□□□ -1.8
CCNT1-204ENST00000551989 SDIM1Q6ZPB5 146 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms