RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 MPC2O95563 127 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 IGKV2D-40P01614 121 aaPredicted RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 IGHV3-30P01768 117 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 IGHV3-33P01772 117 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 IGHV3-30-3P0DP02 117 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 IGHV3-30-5P0DP03 117 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 FABP4P15090 132 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 RPS10P46783 165 aaKnown RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 SULT1A1P50225 295 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 SULT1A2P50226 295 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 ZNF138P52744 262 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 UBE2MP61081 183 aaKnown RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 PPP1R1AQ13522 171 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 PDE6HQ13956 83 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 PMVKQ15126 192 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 PYDC2Q56P42 97 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 C6orf226Q5I0X4 101 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 C10orf113Q5VZT2 155 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 Q6AWC8 147 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 ALKAL2Q6UX46 152 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 DAZ4Q86SG3 579 aaKnown RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 EXOC3-AS1Q8N2X6 119 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 Q8N377 158 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 SLC25A29Q8N8R3 303 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 Q8N976 141 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 PHYHIPLQ96FC7 376 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 DNAJC30Q96LL9 226 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 SLC25A21Q9BQT8 299 aaPredicted RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 MAP1LC3BQ9GZQ8 125 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 GTSF1LQ9H1H1 148 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 C11orf1Q9H5F2 150 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 DAZ3Q9NR90 486 aaKnown RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 OR5AC2Q9NZP5 309 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 VAX2Q9UIW0 290 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 PSG8Q9UQ74 426 aa2.25□□□□□ -2.05
LIMA1-206ENST00000550611 CSDC2Q9Y534 153 aaKnown RBP2.25□□□□□ -2.05
LIMA1-206ENST00000550611 IGHV3-16A0A0C4DH30 117 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 A0A0D9SG52 128 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 C7orf66A4D0T2 115 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 RBAKDNA6NC62 111 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 PANO1I0J062 215 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 M0R2P5 195 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 GNRH2O43555 120 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 SSSCA1O60232 199 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 LINC00694P0DN24 101 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 PYYP10082 97 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 SMAGPQ0VAQ4 97 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 TMEM183BQ1AE95 376 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 OR10J3Q5JRS4 329 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 TMEM78Q5T7P6 136 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 CFAP126Q5VTH2 177 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 MIC13Q5XKP0 118 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 DPPA3Q6W0C5 159 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 SDIM1Q6ZPB5 146 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 TMEM183AQ8IXX5 376 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 HIST3H2BBQ8N257 126 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 ATP6V0E2Q8NHE4 81 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 MBD3L1Q8WWY6 194 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 DIRAS2Q96HU8 199 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 FAM167A-AS1Q96KT0 104 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 LINC01600Q96MT4 127 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 AP1S3Q96PC3 154 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 SMIM3Q9BZL3 60 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 SLC39A9Q9NUM3 307 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 TNFSF18Q9UNG2 199 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 LSM5Q9Y4Y9 91 aaKnown RBP2.24□□□□□ -2.05
LIMA1-206ENST00000550611 TIMM9Q9Y5J7 89 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 LENEPQ9Y5L5 61 aa2.24□□□□□ -2.05
LIMA1-206ENST00000550611 TRAV8-1A0A0A6YYK1 113 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 GGTLC3B5MD39 225 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 G3V3Q6 166 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 LYRM1O43325 122 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 SIX6O95475 246 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 GZMBP10144 247 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 GNG4P50150 75 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 CIRBPQ14011 172 aaKnown RBP2.23□□□□□ -2.05
LIMA1-206ENST00000550611 RHOHQ15669 191 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 KHDC3LQ587J8 217 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 TMEM97Q5BJF2 176 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 ZNF506Q5JVG8 444 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 C9orf163Q8N9P6 203 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 FER1L6-AS1Q8NA97 138 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 OR10G9Q8NGN4 311 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 OR2T35Q8NGX2 323 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 LYPD6BQ8NI32 183 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 Q8TAT8 98 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 FXYD5Q96DB9 178 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 TVP23CQ96ET8 276 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 ANAPC13Q9BS18 74 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 PRADC1Q9BSG0 188 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 SLC25A2Q9BXI2 301 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 UQCC1Q9NVA1 299 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 Q9UF83 564 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 NAT8BQ9UHF3 227 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 ERG28Q9UKR5 140 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 LAMTOR2Q9Y2Q5 125 aa2.23□□□□□ -2.05
LIMA1-206ENST00000550611 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
LIMA1-206ENST00000550611 KANTRA0A1W2PQU2 76 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 FAM24AA6NFZ4 105 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms