RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HIST1H2BOP23527 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 FCER1GP30273 86 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BBP33778 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 AMTP48728 403 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BDP58876 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BCP62807 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST2H2BEQ16778 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.94□□□□□ -0.98
NUP188-211ENST00000550219 Q8N814 137 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BHQ93079 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BNQ99877 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 HIST1H2BMQ99879 126 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 TMEM243Q9BU79 118 aa8.94□□□□□ -0.98
NUP188-211ENST00000550219 C1orf196B1AJZ1 125 aa8.93□□□□□ -0.98
NUP188-211ENST00000550219 H7C423 109 aa8.93□□□□□ -0.98
NUP188-211ENST00000550219 LINC00614P0C842 121 aa8.93□□□□□ -0.98
NUP188-211ENST00000550219 NIT1Q86X76 327 aa8.93□□□□□ -0.98
NUP188-211ENST00000550219 RAB5BP61020 215 aa8.92□□□□□ -0.98
NUP188-211ENST00000550219 LAGE3Q14657 143 aa8.92□□□□□ -0.98
NUP188-211ENST00000550219 ORMDL2Q53FV1 153 aa8.92□□□□□ -0.98
NUP188-211ENST00000550219 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
NUP188-211ENST00000550219 C20orf203Q8NBC4 194 aa8.92□□□□□ -0.98
NUP188-211ENST00000550219 LECT2O14960 151 aa8.91□□□□□ -0.98
NUP188-211ENST00000550219 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
NUP188-211ENST00000550219 CHCHD5Q9BSY4 110 aa8.91□□□□□ -0.98
NUP188-211ENST00000550219 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
NUP188-211ENST00000550219 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
NUP188-211ENST00000550219 LINC00310P59036 64 aa8.9□□□□□ -0.98
NUP188-211ENST00000550219 PKIAP61925 76 aa8.9□□□□□ -0.98
NUP188-211ENST00000550219 WFDC2Q14508 124 aa8.9□□□□□ -0.98
NUP188-211ENST00000550219 COA6Q5JTJ3 125 aaKnown RBP8.9□□□□□ -0.98
NUP188-211ENST00000550219 BAGE3Q86Y29 109 aa8.9□□□□□ -0.98
NUP188-211ENST00000550219 TM2D2Q9BX73 214 aa8.9□□□□□ -0.98
NUP188-211ENST00000550219 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.89□□□□□ -0.99
NUP188-211ENST00000550219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
NUP188-211ENST00000550219 A0A1B0GUV1 79 aa8.89□□□□□ -0.99
NUP188-211ENST00000550219 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
NUP188-211ENST00000550219 GAGE6Q13070 117 aa8.89□□□□□ -0.99
NUP188-211ENST00000550219 MRPL52Q86TS9 123 aaKnown RBP8.89□□□□□ -0.99
NUP188-211ENST00000550219 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
NUP188-211ENST00000550219 KRTAP3-2Q9BYR7 98 aa8.89□□□□□ -0.99
NUP188-211ENST00000550219 FAT1Q14517 4588 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 UBE2L6O14933 153 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 SERF1AO75920 110 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 G0S2P27469 103 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
NUP188-211ENST00000550219 TMEM18Q96B42 140 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 TIMM21Q9BVV7 248 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 FAM30AQ9NZY2 134 aa8.88□□□□□ -0.99
NUP188-211ENST00000550219 CSDC2Q9Y534 153 aaKnown RBP8.88□□□□□ -0.99
NUP188-211ENST00000550219 A0A096LNJ9 63 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 TRAV8-3A0A0A6YYJ7 113 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 TMEM262E9PQX1 116 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 NUPR1O60356 82 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 FGF6P10767 208 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 ZNF25P17030 456 aaPredicted RBP8.87□□□□□ -0.99
NUP188-211ENST00000550219 RBX1P62877 108 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 RPL39P62891 51 aaKnown RBP8.87□□□□□ -0.99
NUP188-211ENST00000550219 MPV17L2Q567V2 206 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 C2orf66Q6UXQ4 117 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 TOMM6Q96B49 74 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 CYSLTR1Q9Y271 337 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 UBE2D4Q9Y2X8 147 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 PYGO1Q9Y3Y4 419 aa8.87□□□□□ -0.99
NUP188-211ENST00000550219 LINC01549A6NIU2 74 aa8.86□□□□□ -0.99
NUP188-211ENST00000550219 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
NUP188-211ENST00000550219 SPANXA1Q9NS26 97 aa8.86□□□□□ -0.99
NUP188-211ENST00000550219 IGLV4-60A0A075B6I1 120 aa8.85□□□□□ -0.99
NUP188-211ENST00000550219 A0A087WX48 190 aa8.85□□□□□ -0.99
NUP188-211ENST00000550219 IGIPA6NJ69 53 aa8.85□□□□□ -0.99
NUP188-211ENST00000550219 BAALCQ8WXS3 180 aa8.85□□□□□ -0.99
NUP188-211ENST00000550219 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
NUP188-211ENST00000550219 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 HSBP1O75506 76 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 HBDP02042 147 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 NPSP0C0P6 89 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 NDUFA6P56556 154 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
NUP188-211ENST00000550219 PMCHL1Q16048 86 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 LINC01620Q4KN68 170 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 PDZD11Q5EBL8 140 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 Q8N976 141 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 CDC42SE2Q9NRR3 84 aa8.84□□□□□ -0.99
NUP188-211ENST00000550219 ERASQ7Z444 233 aa8.83□□□□□ -1
NUP188-211ENST00000550219 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
NUP188-211ENST00000550219 UBE2WQ96B02 151 aa8.83□□□□□ -1
NUP188-211ENST00000550219 RMI2Q96E14 147 aa8.83□□□□□ -1
NUP188-211ENST00000550219 TIMM17AQ99595 171 aa8.83□□□□□ -1
NUP188-211ENST00000550219 KLK12Q9UKR0 248 aa8.83□□□□□ -1
NUP188-211ENST00000550219 IGLV4-3A0A075B6K6 122 aa8.82□□□□□ -1
NUP188-211ENST00000550219 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
NUP188-211ENST00000550219 FAM19A2Q8N3H0 131 aa8.82□□□□□ -1
NUP188-211ENST00000550219 ZNF664Q8N3J9 261 aa8.82□□□□□ -1
NUP188-211ENST00000550219 TMEM141Q96I45 108 aa8.82□□□□□ -1
NUP188-211ENST00000550219 TMEM101Q96IK0 257 aa8.82□□□□□ -1
NUP188-211ENST00000550219 PRR34Q9NV39 138 aa8.82□□□□□ -1
NUP188-211ENST00000550219 ANGP03950 147 aaKnown RBP8.81□□□□□ -1
NUP188-211ENST00000550219 DGAT2L7PQ6IED9 249 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms