RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ESDP10768 282 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 XCL1P47992 114 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 PTTG1IPP53801 180 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 EIF5AP63241 154 aaKnown RBP6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 ZNF664Q8N3J9 261 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 RPL39LQ96EH5 51 aaKnown RBP6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 BTF3L4Q96K17 158 aa6.04□□□□□ -1.44
TRAFD1-207ENST00000550051 TRAV26-2A0A0B4J265 109 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 TRBV6-5A0A0K0K1A5 114 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 LOC107984640A0A0U1RRK4 108 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 A0A1W2PNN7 141 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 SDHAF1A6NFY7 115 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 I3L3M4 83 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 PDE6DO43924 150 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 SS18Q15532 418 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 CD164L2Q6UWJ8 174 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 TMEM101Q96IK0 257 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 CDC42SE2Q9NRR3 84 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 PSORS1C2Q9UIG4 136 aa6.03□□□□□ -1.44
TRAFD1-207ENST00000550051 LPAP08519 4548 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 SMLR1H3BR10 107 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 TEX46H3BTG2 121 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 BCL2L11O43521 198 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 PMCHP20382 165 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 MEF2BQ02080 365 aaPredicted RBP6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 ISOC2Q96AB3 205 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 MED9Q9NWA0 146 aa6.02□□□□□ -1.45
TRAFD1-207ENST00000550051 KANTRA0A1W2PQU2 76 aa6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 CAMPP49913 170 aa6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 GAGE2BQ13066 116 aa6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 EIF5AL1Q6IS14 154 aaKnown RBP6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 SMIM15Q7Z3B0 74 aa6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 MRPL52Q86TS9 123 aaKnown RBP6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 BATF3Q9NR55 127 aa6.01□□□□□ -1.45
TRAFD1-207ENST00000550051 IGLV4-69A0A075B6H9 119 aa6□□□□□ -1.45
TRAFD1-207ENST00000550051 TSHBP01222 138 aa6□□□□□ -1.45
TRAFD1-207ENST00000550051 NUP35Q8NFH5 326 aa6□□□□□ -1.45
TRAFD1-207ENST00000550051 RPP21Q9H633 154 aaKnown RBP6□□□□□ -1.45
TRAFD1-207ENST00000550051 C1orf196B1AJZ1 125 aa5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 APOMO95445 188 aa5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 MT-ND6P03923 174 aa5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 POLR2KP53803 58 aaKnown RBP5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 C9orf116Q5BN46 136 aaPredicted RBP5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 OCC1Q8TAD7 63 aa5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 MRAP2Q96G30 205 aa5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 C2orf48Q96LS8 159 aa5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 RNASE7Q9H1E1 156 aaKnown RBP5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 CSDC2Q9Y534 153 aaKnown RBP5.99□□□□□ -1.45
TRAFD1-207ENST00000550051 TRBV27A0A0K0K1C4 114 aa5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 K7EN84 100 aa5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 BCL2P10415 239 aa5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 TAGLN2P37802 199 aaKnown RBP5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 RNF151Q2KHN1 245 aa5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 DIRC1Q969H9 104 aa5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 ST20Q9HBF5 79 aa5.98□□□□□ -1.45
TRAFD1-207ENST00000550051 COX7A2LO14548 114 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 MALP21145 153 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 RGS21Q2M5E4 152 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 PRR26Q8N8Z3 221 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 CAMK2N2Q96S95 79 aa5.97□□□□□ -1.45
TRAFD1-207ENST00000550051 C9orf118A6NHY6 69 aa5.96□□□□□ -1.46
TRAFD1-207ENST00000550051 A8MWL6 223 aa5.96□□□□□ -1.46
TRAFD1-207ENST00000550051 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
TRAFD1-207ENST00000550051 TSKUQ8WUA8 353 aa5.96□□□□□ -1.46
TRAFD1-207ENST00000550051 TMEM242Q9NWH2 141 aa5.96□□□□□ -1.46
TRAFD1-207ENST00000550051 IGLV1-50A0A075B6I6 118 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 C7orf77A4D0Y5 90 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 F8WDY8 70 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 H0Y9J4 135 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 VCYO14598 125 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 FAM231DQ6ZW35 169 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 TMEM191AQ9H0A3 160 aa5.95□□□□□ -1.46
TRAFD1-207ENST00000550051 GATCO43716 136 aaKnown RBP5.94□□□□□ -1.46
TRAFD1-207ENST00000550051 RAB4AP20338 218 aa5.94□□□□□ -1.46
TRAFD1-207ENST00000550051 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
TRAFD1-207ENST00000550051 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
TRAFD1-207ENST00000550051 MRPL35Q9NZE8 188 aaKnown RBP5.94□□□□□ -1.46
TRAFD1-207ENST00000550051 UBE2D4Q9Y2X8 147 aa5.94□□□□□ -1.46
TRAFD1-207ENST00000550051 A0A087WZ39 114 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 TMEM241Q24JQ0 296 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 C5orf38Q86SI9 138 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 IMMP2LQ96T52 175 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 TIMM21Q9BVV7 248 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
TRAFD1-207ENST00000550051 MUC2Q02817 5179 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 TRAV13-1A0A0B4J241 112 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 A0A1B0GUT8 65 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 PPP1R17O96001 155 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 TLX1NBP0CAT3 122 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 OR10D4PQ8NGN7 298 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 BORCS7Q96B45 105 aa5.92□□□□□ -1.46
TRAFD1-207ENST00000550051 A0A0U1RQV1 116 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms