RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 ESDP10768 282 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 NTF3P20783 257 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 C5orf38Q86SI9 138 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 OR2D3Q8NGH3 330 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 DEDD2Q8WXF8 326 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 C2orf48Q96LS8 159 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 TPPP3Q9BW30 176 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 RBM38Q9H0Z9 239 aaKnown RBP3.79□□□□□ -1.8
LIN7A-202ENST00000549417 MED28Q9H204 178 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 WFDC1Q9HC57 220 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 NIT2Q9NQR4 276 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 ZFP30Q9Y2G7 519 aa3.79□□□□□ -1.8
LIN7A-202ENST00000549417 IGKV2D-26A0A0A0MRZ7 120 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 NAP1L6A6NFF2 107 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 OR5AL1P0C617 328 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 RPL28P46779 137 aaKnown RBP3.78□□□□□ -1.8
LIN7A-202ENST00000549417 UBE2G1P62253 170 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
LIN7A-202ENST00000549417 COX8CQ7Z4L0 72 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 BTF3L4Q96K17 158 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 IMMP2LQ96T52 175 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 TMEM167BQ9NRX6 74 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 UBE2D4Q9Y2X8 147 aa3.78□□□□□ -1.8
LIN7A-202ENST00000549417 NEBP20929 6669 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 A0A1W2PRE2 83 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 NUPR1O60356 82 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 CXorf1O96002 111 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 APCSP02743 223 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 RNASE13Q5GAN3 156 aaKnown RBP3.77□□□□□ -1.81
LIN7A-202ENST00000549417 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
LIN7A-202ENST00000549417 TRIQKQ629K1 86 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 UNQ6190/PRO20217Q6UXQ8 127 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 C3orf22Q8N5N4 141 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 SMDT1Q9H4I9 107 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 HSPB11Q9Y547 144 aa3.77□□□□□ -1.81
LIN7A-202ENST00000549417 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
LIN7A-202ENST00000549417 LTAP01374 205 aa3.76□□□□□ -1.81
LIN7A-202ENST00000549417 ZNF25P17030 456 aaPredicted RBP3.76□□□□□ -1.81
LIN7A-202ENST00000549417 RPL39LQ96EH5 51 aaKnown RBP3.76□□□□□ -1.81
LIN7A-202ENST00000549417 FMC1Q96HJ9 113 aa3.76□□□□□ -1.81
LIN7A-202ENST00000549417 MRPL35Q9NZE8 188 aaKnown RBP3.76□□□□□ -1.81
LIN7A-202ENST00000549417 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
LIN7A-202ENST00000549417 TRAV13-1A0A0B4J241 112 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 CENPXA8MT69 81 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 G3V3Q6 166 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 H7C423 109 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 NDUFA1O15239 70 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 BCE1O60756 84 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 CXCL1P09341 107 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 PCOTHQ58A44 107 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 ORAOV1Q8WV07 137 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 HIST1H2BAQ96A08 127 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 CDC42SE2Q9NRR3 84 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 ALG5Q9Y673 324 aa3.75□□□□□ -1.81
LIN7A-202ENST00000549417 FAM74A7A6NL05 159 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 C1orf196B1AJZ1 125 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 TLX1NBP0CAT3 122 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 CT83Q5H943 113 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 GATD1Q8NB37 220 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 NUDT15Q9NV35 164 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
LIN7A-202ENST00000549417 A0A1B0GVG6 124 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 RPL37AP8A6NKH3 93 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 INMT-MINDY4F8WBC2 141 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 NCR2O95944 276 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 CTRLP40313 264 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 LINC00469Q8N7U9 141 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 DAND5Q8N907 189 aa3.73□□□□□ -1.81
LIN7A-202ENST00000549417 ACTR3CQ9C0K3 210 aaPredicted RBP3.73□□□□□ -1.81
LIN7A-202ENST00000549417 PMCHP20382 165 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 S100A5P33763 92 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 AKR1C3P42330 323 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 UBE2AP49459 152 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 CTAG1AP78358 180 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 TMEM241Q24JQ0 296 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 OR10D4PQ8NGN7 298 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 MARVELD1Q9BSK0 173 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 TMEM242Q9NWH2 141 aa3.72□□□□□ -1.81
LIN7A-202ENST00000549417 SDHAF1A6NFY7 115 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 CCDC160A6NGH7 325 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 TRGC1P0CF51 173 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 ATP6V0CP27449 155 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 ZNF726P1Q15940 193 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 CNPY1Q3B7I2 92 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
LIN7A-202ENST00000549417 CST9LP1Q5W188 147 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 MZT2BQ6NZ67 158 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 C2orf82Q6UX34 121 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 STOML3Q8TAV4 291 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 PPP1R1CQ8WVI7 109 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 MRAP2Q96G30 205 aa3.71□□□□□ -1.82
LIN7A-202ENST00000549417 GAGE10A6NGK3 116 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
LIN7A-202ENST00000549417 I3L3M4 83 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 462.3 ms