RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 RPL39P62891 51 aaKnown RBP13.97□□□□□ -0.17
CTDSP2-204ENST00000548823 RPL36AP83881 106 aaKnown RBP13.97□□□□□ -0.17
CTDSP2-204ENST00000548823 PMVKQ15126 192 aa13.97□□□□□ -0.17
CTDSP2-204ENST00000548823 ANKRD39Q53RE8 183 aa13.97□□□□□ -0.17
CTDSP2-204ENST00000548823 PAPPA-AS1Q5QFB9 102 aa13.97□□□□□ -0.17
CTDSP2-204ENST00000548823 RPL36ALQ969Q0 106 aaKnown RBP13.97□□□□□ -0.17
CTDSP2-204ENST00000548823 M0R143 59 aa13.96□□□□□ -0.17
CTDSP2-204ENST00000548823 DLEU1O43261 78 aa13.96□□□□□ -0.17
CTDSP2-204ENST00000548823 MAPKAPK5-AS1Q8N8E1 139 aa13.96□□□□□ -0.17
CTDSP2-204ENST00000548823 Q9UF83 564 aa13.96□□□□□ -0.17
CTDSP2-204ENST00000548823 COTL1Q14019 142 aa13.96□□□□□ -0.18
CTDSP2-204ENST00000548823 DAZ4Q86SG3 579 aaKnown RBP13.96□□□□□ -0.18
CTDSP2-204ENST00000548823 STPG4Q8N801 248 aa13.96□□□□□ -0.18
CTDSP2-204ENST00000548823 DAZ3Q9NR90 486 aaKnown RBP13.96□□□□□ -0.18
CTDSP2-204ENST00000548823 LYRM9A8MSI8 78 aa13.95□□□□□ -0.18
CTDSP2-204ENST00000548823 CDK2AP2O75956 126 aa13.95□□□□□ -0.18
CTDSP2-204ENST00000548823 CTAG1AP78358 180 aa13.95□□□□□ -0.18
CTDSP2-204ENST00000548823 SLC25A29Q8N8R3 303 aa13.95□□□□□ -0.18
CTDSP2-204ENST00000548823 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
CTDSP2-204ENST00000548823 CHCHD7Q9BUK0 85 aa13.95□□□□□ -0.18
CTDSP2-204ENST00000548823 UBE2D3P61077 147 aa13.94□□□□□ -0.18
CTDSP2-204ENST00000548823 UBE2D2P62837 147 aa13.94□□□□□ -0.18
CTDSP2-204ENST00000548823 ZNRF2Q8NHG8 242 aa13.94□□□□□ -0.18
CTDSP2-204ENST00000548823 CST9LQ9H4G1 147 aa13.94□□□□□ -0.18
CTDSP2-204ENST00000548823 M0R2N4 97 aa13.93□□□□□ -0.18
CTDSP2-204ENST00000548823 FHL2Q14192 279 aa13.93□□□□□ -0.18
CTDSP2-204ENST00000548823 ZC2HC1BQ5TFG8 222 aa13.93□□□□□ -0.18
CTDSP2-204ENST00000548823 BOD1L2Q8IYS8 172 aa13.93□□□□□ -0.18
CTDSP2-204ENST00000548823 SNHG12Q9BXW3 62 aa13.93□□□□□ -0.18
CTDSP2-204ENST00000548823 SPANXA1Q9NS26 97 aa13.93□□□□□ -0.18
CTDSP2-204ENST00000548823 FGF6P10767 208 aa13.92□□□□□ -0.18
CTDSP2-204ENST00000548823 MIFP14174 115 aa13.92□□□□□ -0.18
CTDSP2-204ENST00000548823 C2orf88Q9BSF0 95 aa13.92□□□□□ -0.18
CTDSP2-204ENST00000548823 TIMM21Q9BVV7 248 aa13.92□□□□□ -0.18
CTDSP2-204ENST00000548823 TRGV4A0A0C4DH28 118 aa13.91□□□□□ -0.18
CTDSP2-204ENST00000548823 DEFB4AO15263 64 aa13.91□□□□□ -0.18
CTDSP2-204ENST00000548823 SIVA1O15304 175 aa13.91□□□□□ -0.18
CTDSP2-204ENST00000548823 DEFB104AQ8WTQ1 72 aa13.91□□□□□ -0.18
CTDSP2-204ENST00000548823 IGLV4-3A0A075B6K6 122 aa13.9□□□□□ -0.18
CTDSP2-204ENST00000548823 PRADC1Q9BSG0 188 aa13.9□□□□□ -0.18
CTDSP2-204ENST00000548823 GTSF1LQ9H1H1 148 aa13.9□□□□□ -0.18
CTDSP2-204ENST00000548823 IGLV4-69A0A075B6H9 119 aa13.89□□□□□ -0.19
CTDSP2-204ENST00000548823 Q8N1X5 172 aa13.89□□□□□ -0.19
CTDSP2-204ENST00000548823 AMELXQ99217 191 aa13.89□□□□□ -0.19
CTDSP2-204ENST00000548823 EREGO14944 169 aa13.88□□□□□ -0.19
CTDSP2-204ENST00000548823 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
CTDSP2-204ENST00000548823 NFE4Q86UQ8 179 aa13.88□□□□□ -0.19
CTDSP2-204ENST00000548823 UBE2D4Q9Y2X8 147 aa13.88□□□□□ -0.19
CTDSP2-204ENST00000548823 TRAV10A0A0B4J240 114 aa13.87□□□□□ -0.19
CTDSP2-204ENST00000548823 LINC00694P0DN24 101 aa13.87□□□□□ -0.19
CTDSP2-204ENST00000548823 EMP1P54849 157 aa13.87□□□□□ -0.19
CTDSP2-204ENST00000548823 MRPS36P82909 103 aaKnown RBP13.87□□□□□ -0.19
CTDSP2-204ENST00000548823 VCX2Q9H322 139 aa13.87□□□□□ -0.19
CTDSP2-204ENST00000548823 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
CTDSP2-204ENST00000548823 Q8NAQ8 132 aa13.86□□□□□ -0.19
CTDSP2-204ENST00000548823 FAM104AQ969W3 186 aa13.86□□□□□ -0.19
CTDSP2-204ENST00000548823 IGHV4-28A0A0C4DH34 117 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 GAGE12JA6NER3 117 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 NMUP48645 174 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 GAGE1Q13065 139 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 GAGE4Q13068 117 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 GAGE5Q13069 117 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 GAGE13Q4V321 117 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 TMEM97Q5BJF2 176 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 FAM222AQ5U5X8 452 aa13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 CSDC2Q9Y534 153 aaKnown RBP13.85□□□□□ -0.19
CTDSP2-204ENST00000548823 IGKV2D-26A0A0A0MRZ7 120 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 C11orf86A6NJI1 115 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 E9PLD3 99 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 H7C423 109 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 DEFB130BP0DP73 79 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 DEFB130AP0DP74 79 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 C2orf91Q6ZV80 131 aa13.84□□□□□ -0.19
CTDSP2-204ENST00000548823 C16orf90A8MZG2 172 aa13.83□□□□□ -0.19
CTDSP2-204ENST00000548823 NTM-AS1Q6ZSK4 140 aa13.83□□□□□ -0.19
CTDSP2-204ENST00000548823 Q6ZTC4 211 aa13.83□□□□□ -0.19
CTDSP2-204ENST00000548823 HIGD1BQ9P298 99 aa13.83□□□□□ -0.19
CTDSP2-204ENST00000548823 TEX48A0A1B0GUV7 120 aa13.83□□□□□ -0.2
CTDSP2-204ENST00000548823 HERVK_113P61574 105 aa13.83□□□□□ -0.2
CTDSP2-204ENST00000548823 Q6ZR54 194 aa13.83□□□□□ -0.2
CTDSP2-204ENST00000548823 PCP2Q8IVA1 136 aa13.83□□□□□ -0.2
CTDSP2-204ENST00000548823 OPRPNQ99935 248 aaPredicted RBP13.83□□□□□ -0.2
CTDSP2-204ENST00000548823 PRO0255Q9UI72 69 aa13.83□□□□□ -0.2
CTDSP2-204ENST00000548823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.82□□□□□ -0.2
CTDSP2-204ENST00000548823 IGKV2-29A2NJV5 120 aaPredicted RBP13.82□□□□□ -0.2
CTDSP2-204ENST00000548823 LRP1BQ9NZR2 4599 aa13.81□□□□□ -0.2
CTDSP2-204ENST00000548823 TP73-AS1Q9UF72 201 aa13.8□□□□□ -0.2
CTDSP2-204ENST00000548823 DMBT1Q9UGM3 2413 aaPredicted RBP13.79□□□□□ -0.2
CTDSP2-204ENST00000548823 LOC100131303A0A0U1RQF7 123 aa13.79□□□□□ -0.2
CTDSP2-204ENST00000548823 SPART-AS1P0CW21 52 aa13.79□□□□□ -0.2
CTDSP2-204ENST00000548823 TMEM243Q9BU79 118 aa13.79□□□□□ -0.2
CTDSP2-204ENST00000548823 CHAC1Q9BUX1 264 aa13.79□□□□□ -0.2
CTDSP2-204ENST00000548823 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
CTDSP2-204ENST00000548823 DAD1P61803 113 aa13.78□□□□□ -0.2
CTDSP2-204ENST00000548823 COL5A1-AS1Q5SY13 56 aa13.78□□□□□ -0.2
CTDSP2-204ENST00000548823 DGAT2L7PQ6IED9 249 aa13.77□□□□□ -0.21
CTDSP2-204ENST00000548823 Q6ZUT4 128 aa13.77□□□□□ -0.21
CTDSP2-204ENST00000548823 APOBP04114 4563 aaKnown RBP13.77□□□□□ -0.21
CTDSP2-204ENST00000548823 DEFB131BA0A096LNP1 70 aa13.76□□□□□ -0.21
CTDSP2-204ENST00000548823 TINCRA0A1B0GVN0 87 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms