RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 KRTAP3-3Q9BYR6 98 aa9.01□□□□□ -0.97
PTCH1-217ENST00000548420 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
PTCH1-217ENST00000548420 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 LINC00862A6NCI5 91 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 SMKR1H3BMG3 65 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 APCSP02743 223 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 CAMPP49913 170 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 UQCC3Q6UW78 93 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 CLPSL2Q6UWE3 100 aa9□□□□□ -0.97
PTCH1-217ENST00000548420 VCYO14598 125 aa8.99□□□□□ -0.97
PTCH1-217ENST00000548420 HBBP68871 147 aa8.99□□□□□ -0.97
PTCH1-217ENST00000548420 ATP5L2Q7Z4Y8 100 aa8.99□□□□□ -0.97
PTCH1-217ENST00000548420 ANAPC16Q96DE5 110 aa8.99□□□□□ -0.97
PTCH1-217ENST00000548420 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-217ENST00000548420 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-217ENST00000548420 IGKV2-29A2NJV5 120 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-217ENST00000548420 MT-ND4LP03901 98 aa8.98□□□□□ -0.97
PTCH1-217ENST00000548420 S100A8P05109 93 aa8.98□□□□□ -0.97
PTCH1-217ENST00000548420 FGF6P10767 208 aa8.98□□□□□ -0.97
PTCH1-217ENST00000548420 SUMO2P61956 95 aaKnown RBP8.98□□□□□ -0.97
PTCH1-217ENST00000548420 RPL32P62910 135 aaKnown RBP8.98□□□□□ -0.97
PTCH1-217ENST00000548420 C14orf177Q52M58 125 aa8.98□□□□□ -0.97
PTCH1-217ENST00000548420 MRPL54Q6P161 138 aaKnown RBP8.98□□□□□ -0.97
PTCH1-217ENST00000548420 TMEM242Q9NWH2 141 aa8.98□□□□□ -0.97
PTCH1-217ENST00000548420 TMEM218A2RU14 115 aa8.97□□□□□ -0.97
PTCH1-217ENST00000548420 USP17L23D6RBM5 183 aa8.97□□□□□ -0.97
PTCH1-217ENST00000548420 F8W036 122 aa8.97□□□□□ -0.97
PTCH1-217ENST00000548420 ZNF25P17030 456 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-217ENST00000548420 ADCYAP1P18509 176 aa8.97□□□□□ -0.97
PTCH1-217ENST00000548420 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
PTCH1-217ENST00000548420 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
PTCH1-217ENST00000548420 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
PTCH1-217ENST00000548420 A0A0U1RQV1 116 aa8.96□□□□□ -0.98
PTCH1-217ENST00000548420 CKS2P33552 79 aa8.96□□□□□ -0.98
PTCH1-217ENST00000548420 AMMECR1LQ6DCA0 310 aa8.96□□□□□ -0.98
PTCH1-217ENST00000548420 PHOX2AO14813 284 aa8.95□□□□□ -0.98
PTCH1-217ENST00000548420 HLA-DQA1P01909 254 aa8.95□□□□□ -0.98
PTCH1-217ENST00000548420 PPBPP02775 128 aa8.95□□□□□ -0.98
PTCH1-217ENST00000548420 PRSS1P07477 247 aa8.95□□□□□ -0.98
PTCH1-217ENST00000548420 DGAT2L7PQ6IED9 249 aa8.95□□□□□ -0.98
PTCH1-217ENST00000548420 C7orf77A4D0Y5 90 aa8.94□□□□□ -0.98
PTCH1-217ENST00000548420 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
PTCH1-217ENST00000548420 RNASEKQ6P5S7 137 aaKnown RBP8.94□□□□□ -0.98
PTCH1-217ENST00000548420 CLRN3Q8NCR9 226 aa8.94□□□□□ -0.98
PTCH1-217ENST00000548420 OR5A1Q8NGJ0 315 aa8.94□□□□□ -0.98
PTCH1-217ENST00000548420 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
PTCH1-217ENST00000548420 CDC42SE2Q9NRR3 84 aa8.94□□□□□ -0.98
PTCH1-217ENST00000548420 CSDC2Q9Y534 153 aaKnown RBP8.94□□□□□ -0.98
PTCH1-217ENST00000548420 D6R8Y8 96 aa8.93□□□□□ -0.98
PTCH1-217ENST00000548420 IMMP2LQ96T52 175 aa8.93□□□□□ -0.98
PTCH1-217ENST00000548420 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
PTCH1-217ENST00000548420 PRSS47A8MTI9 375 aa8.92□□□□□ -0.98
PTCH1-217ENST00000548420 NPYP01303 97 aa8.92□□□□□ -0.98
PTCH1-217ENST00000548420 FCER1GP30273 86 aa8.92□□□□□ -0.98
PTCH1-217ENST00000548420 C10orf91Q5T1B1 145 aa8.92□□□□□ -0.98
PTCH1-217ENST00000548420 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
PTCH1-217ENST00000548420 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
PTCH1-217ENST00000548420 TCAPO15273 167 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 TMEM136Q6ZRR5 245 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 ORMDL3Q8N138 153 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 ZNF664Q8N3J9 261 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 CHCHD10Q8WYQ3 142 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-217ENST00000548420 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 SMIM2Q9BVW6 85 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 CTDSP1Q9GZU7 261 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
PTCH1-217ENST00000548420 LINC00959A0A1B0GUT2 108 aa8.9□□□□□ -0.98
PTCH1-217ENST00000548420 GAGE12HA6NDE8 117 aa8.9□□□□□ -0.98
PTCH1-217ENST00000548420 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
PTCH1-217ENST00000548420 COMMD7Q86VX2 200 aa8.9□□□□□ -0.98
PTCH1-217ENST00000548420 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
PTCH1-217ENST00000548420 SLPIP03973 132 aa8.89□□□□□ -0.99
PTCH1-217ENST00000548420 FOXI1Q12951 378 aa8.89□□□□□ -0.99
PTCH1-217ENST00000548420 C15orf56Q8N910 161 aa8.89□□□□□ -0.99
PTCH1-217ENST00000548420 PRELID3AQ96N28 172 aa8.89□□□□□ -0.99
PTCH1-217ENST00000548420 LAMTOR2Q9Y2Q5 125 aa8.89□□□□□ -0.99
PTCH1-217ENST00000548420 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
PTCH1-217ENST00000548420 SMAGPQ0VAQ4 97 aa8.88□□□□□ -0.99
PTCH1-217ENST00000548420 FAM104AQ969W3 186 aa8.88□□□□□ -0.99
PTCH1-217ENST00000548420 TRAV9-1A0A075B6T8 112 aa8.87□□□□□ -0.99
PTCH1-217ENST00000548420 CCL25O15444 150 aa8.87□□□□□ -0.99
PTCH1-217ENST00000548420 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
PTCH1-217ENST00000548420 CFAP161Q6P656 301 aa8.87□□□□□ -0.99
PTCH1-217ENST00000548420 SDIM1Q6ZPB5 146 aa8.87□□□□□ -0.99
PTCH1-217ENST00000548420 TMEM18Q96B42 140 aa8.87□□□□□ -0.99
PTCH1-217ENST00000548420 CARHSP1Q9Y2V2 147 aaKnown RBP8.87□□□□□ -0.99
PTCH1-217ENST00000548420 hDV102S1A0JD36 115 aa8.86□□□□□ -0.99
PTCH1-217ENST00000548420 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
PTCH1-217ENST00000548420 XCL1P47992 114 aa8.85□□□□□ -0.99
PTCH1-217ENST00000548420 SS18Q15532 418 aa8.85□□□□□ -0.99
PTCH1-217ENST00000548420 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
PTCH1-217ENST00000548420 GVQW2A0A096LPI5 108 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-217ENST00000548420 C1orf196B1AJZ1 125 aa8.84□□□□□ -0.99
PTCH1-217ENST00000548420 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
PTCH1-217ENST00000548420 SPANXA1Q9NS26 97 aa8.84□□□□□ -0.99
PTCH1-217ENST00000548420 AP5S1Q9NUS5 200 aa8.84□□□□□ -0.99
PTCH1-217ENST00000548420 CIRBPQ14011 172 aaKnown RBP8.83□□□□□ -1
PTCH1-217ENST00000548420 Q6ZUT4 128 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms