RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 IGHV3-38A0A0C4DH36 116 aa10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 KNCNA6PVL3 124 aa10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 FHL2Q14192 279 aa10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 RHPN1-AS1Q9BWJ2 59 aa10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
RAPGEF3-216ENST00000547856 C9orf85Q96MD7 179 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 ZFP36P26651 326 aaKnown RBP10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 WFDC9Q8NEX5 89 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 FAM223BA6NKX1 122 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 NDUFA1O15239 70 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 TIMM17BO60830 172 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 COX6A2Q02221 97 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 FAM223AQ8IWN6 122 aa10.41□□□□□ -0.74
RAPGEF3-216ENST00000547856 HILS1P60008 231 aa10.4□□□□□ -0.74
RAPGEF3-216ENST00000547856 SPINK13Q1W4C9 94 aa10.4□□□□□ -0.74
RAPGEF3-216ENST00000547856 PRM2P04554 102 aa10.39□□□□□ -0.75
RAPGEF3-216ENST00000547856 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
RAPGEF3-216ENST00000547856 VPS13CQ709C8 3753 aa10.39□□□□□ -0.75
RAPGEF3-216ENST00000547856 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
RAPGEF3-216ENST00000547856 COL12A1Q99715 3063 aa10.38□□□□□ -0.75
RAPGEF3-216ENST00000547856 A0A087WYN8 130 aa10.38□□□□□ -0.75
RAPGEF3-216ENST00000547856 SAA4P35542 130 aa10.38□□□□□ -0.75
RAPGEF3-216ENST00000547856 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
RAPGEF3-216ENST00000547856 NDUFA4O00483 81 aa10.37□□□□□ -0.75
RAPGEF3-216ENST00000547856 NCR3O14931 201 aa10.37□□□□□ -0.75
RAPGEF3-216ENST00000547856 TRAV23DV6A0A075B6W5 121 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 IGHV1OR15-1A0A075B7D0 117 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 FAM222AQ5U5X8 452 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 C1orf43Q9BWL3 253 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 PFN2P35080 140 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 Q6JHZ5 121 aa10.36□□□□□ -0.75
RAPGEF3-216ENST00000547856 SPTAN1Q13813 2472 aaKnown RBP10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 SORL1Q92673 2214 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 SLPIP03973 132 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 Q6ZSN1 163 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 C5orf56Q8N8D9 126 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 MAP1AP78559 2803 aaPredicted RBP10.35□□□□□ -0.75
RAPGEF3-216ENST00000547856 HIST2H2BCQ6DN03 193 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 HIST2H2BDQ6DRA6 164 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 C20orf197Q8N268 126 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 PKIGQ9Y2B9 76 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 GHRHP01286 108 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 KLK9Q2XQG4 91 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
RAPGEF3-216ENST00000547856 CFAP46Q8IYW2 2715 aa10.33□□□□□ -0.76
RAPGEF3-216ENST00000547856 C19orf84I3L1E1 186 aa10.33□□□□□ -0.76
RAPGEF3-216ENST00000547856 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
RAPGEF3-216ENST00000547856 PKD1L2Q7Z442 2459 aa10.32□□□□□ -0.76
RAPGEF3-216ENST00000547856 J3QLI3 93 aa10.31□□□□□ -0.76
RAPGEF3-216ENST00000547856 PRORYQ9H606 182 aa10.31□□□□□ -0.76
RAPGEF3-216ENST00000547856 LECT2O14960 151 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 CRPP02741 224 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 LINC00337Q8N6G1 96 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 RPL35AP18077 110 aaKnown RBP10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 LMO4P61968 165 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 FAM19A1Q7Z5A9 133 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 ABCA2Q9BZC7 2435 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
RAPGEF3-216ENST00000547856 RBMY1BA6NDE4 496 aaKnown RBP10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 RBMY1EA6NEQ0 496 aaKnown RBP10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 RBMY1DP0C7P1 496 aaKnown RBP10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 RBMY1A1P0DJD3 496 aaKnown RBP10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 RBMY1CP0DJD4 496 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 GNLYP22749 145 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 RBMY1FQ15415 496 aaKnown RBP10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 LY6EQ16553 131 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 FLNCQ14315 2725 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 CELSR2Q9HCU4 2923 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 SMIM11BQ8TCY0 68 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 CUBNO60494 3623 aa10.29□□□□□ -0.76
RAPGEF3-216ENST00000547856 FAM236DA0A1B0GTK5 79 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 SMIM1B2RUZ4 78 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 FAM236CP0DP71 79 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 WFDC11Q8NEX6 87 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 PIMREGQ9BSJ6 248 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 PRO0628Q9UI54 55 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
RAPGEF3-216ENST00000547856 PIEZO1Q92508 2521 aa10.27□□□□□ -0.77
RAPGEF3-216ENST00000547856 IGLV5-39A0A0G2JS06 123 aa10.27□□□□□ -0.77
RAPGEF3-216ENST00000547856 DOPEY2Q9Y3R5 2298 aa10.27□□□□□ -0.77
RAPGEF3-216ENST00000547856 UTP20O75691 2785 aaKnown RBP10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 TRAV13-2A0A0B4J235 113 aa10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 ZNF415Q09FC8 603 aa10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 SND1-IT1Q9HBX3 110 aa10.26□□□□□ -0.77
RAPGEF3-216ENST00000547856 NDUFC2O95298 119 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 XCL1P47992 114 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 RPL36AP83881 106 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms