RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
HIF1A-205ENST00000547430 SNRPD3P62318 126 aaKnown RBP3.68□□□□□ -1.82
HIF1A-205ENST00000547430 HIST1H1AQ02539 215 aaPredicted RBP3.68□□□□□ -1.82
HIF1A-205ENST00000547430 IBA57Q5T440 356 aaKnown RBP3.68□□□□□ -1.82
HIF1A-205ENST00000547430 FAM19A3Q7Z5A8 133 aa3.68□□□□□ -1.82
HIF1A-205ENST00000547430 ZC2HC1AQ96GY0 325 aa3.68□□□□□ -1.82
HIF1A-205ENST00000547430 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
HIF1A-205ENST00000547430 ZNF492Q9P255 531 aa3.68□□□□□ -1.82
HIF1A-205ENST00000547430 V9GYV3 84 aa3.68□□□□□ -1.82
HIF1A-205ENST00000547430 NIPBLQ6KC79 2804 aaeCLIP3.68□□□□□ -1.82
HIF1A-205ENST00000547430 TGIF2-C20orf24A0A0A6YYL0 155 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 A0A0J9YX75 114 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 KNCNA6PVL3 124 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 SH2D1AO60880 128 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 IGLV1-51P01701 117 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 CXCL1P09341 107 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 S100PP25815 95 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 CRIP1P50238 77 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
HIF1A-205ENST00000547430 ELOBQ15370 118 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 GDF5OSQ5U4N7 250 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 EBLN2Q6P2I7 272 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 C3orf56Q8N813 242 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 IL36BQ9NZH7 164 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 LENEPQ9Y5L5 61 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 ATRQ13535 2644 aa3.67□□□□□ -1.82
HIF1A-205ENST00000547430 TMEM189A5PLL7 270 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 FABP5P3A8MUU1 101 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 TCL1AP56279 114 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 FOXI2Q6ZQN5 318 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 ZFAND2AQ8N6M9 145 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 OR4B1Q8NGF8 309 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 OR2D3Q8NGH3 330 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 IMMP2LQ96T52 175 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 TRAPPC1Q9Y5R8 145 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 ICOSQ9Y6W8 199 aa3.66□□□□□ -1.82
HIF1A-205ENST00000547430 SORL1Q92673 2214 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 TRBV24-1A0A075B6N3 115 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 TMSB15BA0A087X1C1 80 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 SMIM27A0A1W2PRY6 76 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 A8MWP4 228 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 OR11H12B2RN74 326 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 H3BMM0 161 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 H3BQ85 93 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 SPINK4O60575 86 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 ORM1P02763 201 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 GPX1P07203 203 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 CD7P09564 240 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 GZMBP10144 247 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 HLA-DRB4P13762 266 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 RNASE4P34096 147 aaKnown RBP3.65□□□□□ -1.83
HIF1A-205ENST00000547430 INSL3P51460 131 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 MP68P56378 58 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 RPL19P84098 196 aaKnown RBP3.65□□□□□ -1.83
HIF1A-205ENST00000547430 AMTNQ6UX39 209 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 Q6ZQT7 251 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 C3orf22Q8N5N4 141 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 WFDC9Q8NEX5 89 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 TSKUQ8WUA8 353 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 ODF3Q96PU9 254 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 HLA-DRB4X5D2U9 266 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 TENM1Q9UKZ4 2725 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 CUBNO60494 3623 aa3.65□□□□□ -1.83
HIF1A-205ENST00000547430 TRAV9-1A0A075B6T8 112 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 TRAV21A0A0B4J279 112 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 C7orf71A4D174 169 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 GRIFINA4D1Z8 144 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 A8MTW9 85 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 M0R2Z0 102 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 FXYD7P58549 80 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 RPS20P60866 119 aaKnown RBP3.64□□□□□ -1.83
HIF1A-205ENST00000547430 SPINK13Q1W4C9 94 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 NUP35Q8NFH5 326 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 BTF3L4Q96K17 158 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 NAT8BQ9UHF3 227 aa3.64□□□□□ -1.83
HIF1A-205ENST00000547430 TRAV12-2A0A075B6T6 113 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 TRAV12-3A0A0B4J271 114 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 HIGD1CA8MV81 97 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 TYMSP04818 313 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 FOXA3P55318 350 aaPredicted RBP3.63□□□□□ -1.83
HIF1A-205ENST00000547430 Q6AWC8 147 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 MRPL54Q6P161 138 aaKnown RBP3.63□□□□□ -1.83
HIF1A-205ENST00000547430 ADM2Q7Z4H4 148 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 B9D2Q9BPU9 175 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 NAGKQ9UJ70 344 aa3.63□□□□□ -1.83
HIF1A-205ENST00000547430 MUC21A0A0G2JKD1 596 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 MUC21A0A140T8X8 626 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 C1orf196B1AJZ1 125 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 GNRH2O43555 120 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 TRGC2P03986 189 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 ARMS2P0C7Q2 107 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 IGLC6P0CF74 106 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 S100A2P29034 98 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 PDZD11Q5EBL8 140 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 LYZL1Q6UWQ5 148 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 DEFB125Q8N687 156 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 FER1L6-AS1Q8NA97 138 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 BORCS7Q96B45 105 aa3.62□□□□□ -1.83
HIF1A-205ENST00000547430 R4GN34 69 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms