RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 KRTAP10-2P60368 255 aa9.57□□□□□ -0.88
DDX54-203ENST00000546869 ZNF664Q8N3J9 261 aa9.57□□□□□ -0.88
DDX54-203ENST00000546869 Q8N814 137 aa9.57□□□□□ -0.88
DDX54-203ENST00000546869 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
DDX54-203ENST00000546869 ALKBH7Q9BT30 221 aaPredicted RBP9.57□□□□□ -0.88
DDX54-203ENST00000546869 MRPL18Q9H0U6 180 aaKnown RBP9.57□□□□□ -0.88
DDX54-203ENST00000546869 KIAA1644Q3SXP7 199 aa9.56□□□□□ -0.88
DDX54-203ENST00000546869 DGAT2L7PQ6IED9 249 aa9.56□□□□□ -0.88
DDX54-203ENST00000546869 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
DDX54-203ENST00000546869 LOC389332A0A1B0GUA5 103 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 CCL25O15444 150 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 FABP9Q0Z7S8 132 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 ORMDL2Q53FV1 153 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 BAALCQ8WXS3 180 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 PYGO1Q9Y3Y4 419 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 TRAPPC1Q9Y5R8 145 aa9.55□□□□□ -0.88
DDX54-203ENST00000546869 LINC01546A6NGU7 62 aa9.54□□□□□ -0.88
DDX54-203ENST00000546869 G0S2P27469 103 aa9.54□□□□□ -0.88
DDX54-203ENST00000546869 MRPS36P82909 103 aaKnown RBP9.54□□□□□ -0.88
DDX54-203ENST00000546869 BIRC6Q9NR09 4857 aa9.53□□□□□ -0.88
DDX54-203ENST00000546869 IFI27P40305 119 aaPredicted RBP9.53□□□□□ -0.88
DDX54-203ENST00000546869 RPL39P62891 51 aaKnown RBP9.53□□□□□ -0.88
DDX54-203ENST00000546869 WFDC2Q14508 124 aa9.53□□□□□ -0.88
DDX54-203ENST00000546869 C14orf177Q52M58 125 aa9.53□□□□□ -0.88
DDX54-203ENST00000546869 DNAH11Q96DT5 4516 aa9.53□□□□□ -0.88
DDX54-203ENST00000546869 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
DDX54-203ENST00000546869 LINC00959A0A1B0GUT2 108 aa9.52□□□□□ -0.89
DDX54-203ENST00000546869 C16orf90A8MZG2 172 aa9.52□□□□□ -0.89
DDX54-203ENST00000546869 NPSP0C0P6 89 aa9.52□□□□□ -0.89
DDX54-203ENST00000546869 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
DDX54-203ENST00000546869 SS18Q15532 418 aa9.51□□□□□ -0.89
DDX54-203ENST00000546869 CBLN2Q8IUK8 224 aa9.51□□□□□ -0.89
DDX54-203ENST00000546869 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
DDX54-203ENST00000546869 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
DDX54-203ENST00000546869 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
DDX54-203ENST00000546869 C1orf196B1AJZ1 125 aa9.5□□□□□ -0.89
DDX54-203ENST00000546869 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
DDX54-203ENST00000546869 CYSLTR1Q9Y271 337 aa9.5□□□□□ -0.89
DDX54-203ENST00000546869 IGKV3OR2-268A0A0C4DH90 116 aa9.49□□□□□ -0.89
DDX54-203ENST00000546869 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
DDX54-203ENST00000546869 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
DDX54-203ENST00000546869 LECT2O14960 151 aa9.49□□□□□ -0.89
DDX54-203ENST00000546869 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
DDX54-203ENST00000546869 FOXI1Q12951 378 aa9.48□□□□□ -0.89
DDX54-203ENST00000546869 CFAP161Q6P656 301 aa9.48□□□□□ -0.89
DDX54-203ENST00000546869 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
DDX54-203ENST00000546869 Q6ZUT4 128 aa9.48□□□□□ -0.89
DDX54-203ENST00000546869 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
DDX54-203ENST00000546869 GCSHP23434 173 aa9.47□□□□□ -0.89
DDX54-203ENST00000546869 C18orf32Q8TCD1 76 aa9.47□□□□□ -0.89
DDX54-203ENST00000546869 TOMM6Q96B49 74 aa9.47□□□□□ -0.89
DDX54-203ENST00000546869 PKHD1P08F94 4074 aa9.46□□□□□ -0.89
DDX54-203ENST00000546869 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
DDX54-203ENST00000546869 PRSS1P07477 247 aa9.46□□□□□ -0.9
DDX54-203ENST00000546869 TMEM141Q96I45 108 aa9.46□□□□□ -0.9
DDX54-203ENST00000546869 TIMM17AQ99595 171 aa9.46□□□□□ -0.9
DDX54-203ENST00000546869 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.9
DDX54-203ENST00000546869 COLCA2A8K830 154 aa9.45□□□□□ -0.9
DDX54-203ENST00000546869 CDK2AP2O75956 126 aa9.45□□□□□ -0.9
DDX54-203ENST00000546869 LINC00614P0C842 121 aa9.45□□□□□ -0.9
DDX54-203ENST00000546869 XCL1P47992 114 aa9.45□□□□□ -0.9
DDX54-203ENST00000546869 RNASE13Q5GAN3 156 aaKnown RBP9.45□□□□□ -0.9
DDX54-203ENST00000546869 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
DDX54-203ENST00000546869 FA2HQ7L5A8 372 aa9.45□□□□□ -0.9
DDX54-203ENST00000546869 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
DDX54-203ENST00000546869 FUSP35637 526 aaKnown RBP eCLIP9.44□□□□□ -0.9
DDX54-203ENST00000546869 RAB5BP61020 215 aa9.44□□□□□ -0.9
DDX54-203ENST00000546869 ERASQ7Z444 233 aa9.44□□□□□ -0.9
DDX54-203ENST00000546869 AMELXQ99217 191 aa9.44□□□□□ -0.9
DDX54-203ENST00000546869 AP5S1Q9NUS5 200 aa9.44□□□□□ -0.9
DDX54-203ENST00000546869 DYNC1H1Q14204 4646 aaKnown RBP9.44□□□□□ -0.9
DDX54-203ENST00000546869 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.43□□□□□ -0.9
DDX54-203ENST00000546869 KRTAP10-1P60331 282 aa9.43□□□□□ -0.9
DDX54-203ENST00000546869 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
DDX54-203ENST00000546869 TEX43Q6ZNM6 134 aa9.43□□□□□ -0.9
DDX54-203ENST00000546869 C15orf56Q8N910 161 aa9.43□□□□□ -0.9
DDX54-203ENST00000546869 URB1-AS1Q96HZ7 61 aa9.43□□□□□ -0.9
DDX54-203ENST00000546869 GVQW2A0A096LPI5 108 aaPredicted RBP9.42□□□□□ -0.9
DDX54-203ENST00000546869 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
DDX54-203ENST00000546869 Q6ZN92 141 aa9.42□□□□□ -0.9
DDX54-203ENST00000546869 FAM19A3Q7Z5A8 133 aa9.42□□□□□ -0.9
DDX54-203ENST00000546869 VCX2Q9H322 139 aa9.42□□□□□ -0.9
DDX54-203ENST00000546869 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 hDV102S1A0JD36 115 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 TRGC2P03986 189 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 LINC00173Q6ZV60 143 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
DDX54-203ENST00000546869 DNAH5Q8TE73 4624 aa9.4□□□□□ -0.9
DDX54-203ENST00000546869 COX7A2LO14548 114 aa9.4□□□□□ -0.9
DDX54-203ENST00000546869 UBE2D1P51668 147 aa9.4□□□□□ -0.9
DDX54-203ENST00000546869 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
DDX54-203ENST00000546869 C9orf163Q8N9P6 203 aa9.4□□□□□ -0.9
DDX54-203ENST00000546869 CHCHD1Q96BP2 118 aaKnown RBP9.4□□□□□ -0.9
DDX54-203ENST00000546869 A0A096LNJ9 63 aa9.39□□□□□ -0.91
DDX54-203ENST00000546869 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
DDX54-203ENST00000546869 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms