RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 CDC42SE2Q9NRR3 84 aa11.13□□□□□ -0.63
CCDC38-203ENST00000546803 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
CCDC38-203ENST00000546803 C16orf90A8MZG2 172 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 KRTAP26-1Q6PEX3 210 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 Q8N814 137 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 YPEL4Q96NS1 127 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 ALKBH7Q9BT30 221 aaPredicted RBP11.12□□□□□ -0.63
CCDC38-203ENST00000546803 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 FAT2Q9NYQ8 4349 aa11.12□□□□□ -0.63
CCDC38-203ENST00000546803 IGLV10-54A0A075B6I4 117 aa11.11□□□□□ -0.63
CCDC38-203ENST00000546803 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
CCDC38-203ENST00000546803 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
CCDC38-203ENST00000546803 TRAPPC1Q9Y5R8 145 aa11.11□□□□□ -0.63
CCDC38-203ENST00000546803 IGKV3OR2-268A0A0C4DH90 116 aa11.1□□□□□ -0.63
CCDC38-203ENST00000546803 RPL39P62891 51 aaKnown RBP11.1□□□□□ -0.63
CCDC38-203ENST00000546803 WFDC2Q14508 124 aa11.1□□□□□ -0.63
CCDC38-203ENST00000546803 FRAS1Q86XX4 4008 aa11.09□□□□□ -0.63
CCDC38-203ENST00000546803 LECT2O14960 151 aa11.09□□□□□ -0.63
CCDC38-203ENST00000546803 G0S2P27469 103 aa11.09□□□□□ -0.63
CCDC38-203ENST00000546803 IFI27P40305 119 aaPredicted RBP11.09□□□□□ -0.63
CCDC38-203ENST00000546803 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
CCDC38-203ENST00000546803 CBLN2Q8IUK8 224 aa11.09□□□□□ -0.63
CCDC38-203ENST00000546803 PRSS3P2Q8NHM4 247 aa11.09□□□□□ -0.63
CCDC38-203ENST00000546803 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.64
CCDC38-203ENST00000546803 CHCHD10Q8WYQ3 142 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-203ENST00000546803 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
CCDC38-203ENST00000546803 CCL25O15444 150 aa11.07□□□□□ -0.64
CCDC38-203ENST00000546803 MRPS36P82909 103 aaKnown RBP11.07□□□□□ -0.64
CCDC38-203ENST00000546803 SS18Q15532 418 aa11.07□□□□□ -0.64
CCDC38-203ENST00000546803 CYSLTR1Q9Y271 337 aa11.07□□□□□ -0.64
CCDC38-203ENST00000546803 GAGE12HA6NDE8 117 aa11.06□□□□□ -0.64
CCDC38-203ENST00000546803 Q6ZUT4 128 aa11.06□□□□□ -0.64
CCDC38-203ENST00000546803 IGLV5-52A0A0A0MRZ9 124 aa11.05□□□□□ -0.64
CCDC38-203ENST00000546803 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
CCDC38-203ENST00000546803 C2orf66Q6UXQ4 117 aa11.05□□□□□ -0.64
CCDC38-203ENST00000546803 EPPK1P58107 5090 aaKnown RBP11.04□□□□□ -0.64
CCDC38-203ENST00000546803 LINC01546A6NGU7 62 aa11.04□□□□□ -0.64
CCDC38-203ENST00000546803 C1orf196B1AJZ1 125 aa11.04□□□□□ -0.64
CCDC38-203ENST00000546803 NPSP0C0P6 89 aa11.03□□□□□ -0.64
CCDC38-203ENST00000546803 FUSP35637 526 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC38-203ENST00000546803 RNASE13Q5GAN3 156 aaKnown RBP11.03□□□□□ -0.64
CCDC38-203ENST00000546803 CFAP161Q6P656 301 aa11.03□□□□□ -0.64
CCDC38-203ENST00000546803 FA2HQ7L5A8 372 aa11.03□□□□□ -0.64
CCDC38-203ENST00000546803 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-203ENST00000546803 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 GCSHP23434 173 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 XCL1P47992 114 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 FOXI1Q12951 378 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 FAM104AQ969W3 186 aa11.02□□□□□ -0.65
CCDC38-203ENST00000546803 OPRPNQ99935 248 aaPredicted RBP11.02□□□□□ -0.65
CCDC38-203ENST00000546803 IGLV4-3A0A075B6K6 122 aa11.01□□□□□ -0.65
CCDC38-203ENST00000546803 C18orf32Q8TCD1 76 aa11.01□□□□□ -0.65
CCDC38-203ENST00000546803 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
CCDC38-203ENST00000546803 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
CCDC38-203ENST00000546803 HECTD4Q9Y4D8 3996 aa11□□□□□ -0.65
CCDC38-203ENST00000546803 IGIPA6NJ69 53 aa11□□□□□ -0.65
CCDC38-203ENST00000546803 Q6ZN92 141 aa11□□□□□ -0.65
CCDC38-203ENST00000546803 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
CCDC38-203ENST00000546803 IFITM10A6NMD0 228 aa10.99□□□□□ -0.65
CCDC38-203ENST00000546803 PRSS1P07477 247 aa10.99□□□□□ -0.65
CCDC38-203ENST00000546803 RAB5BP61020 215 aa10.99□□□□□ -0.65
CCDC38-203ENST00000546803 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
CCDC38-203ENST00000546803 TIMM17AQ99595 171 aa10.99□□□□□ -0.65
CCDC38-203ENST00000546803 PKD1P98161 4303 aa10.98□□□□□ -0.65
CCDC38-203ENST00000546803 LINC00614P0C842 121 aa10.98□□□□□ -0.65
CCDC38-203ENST00000546803 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
CCDC38-203ENST00000546803 hDV102S1A0JD36 115 aa10.97□□□□□ -0.65
CCDC38-203ENST00000546803 COLCA2A8K830 154 aa10.97□□□□□ -0.65
CCDC38-203ENST00000546803 KRTAP10-1P60331 282 aa10.97□□□□□ -0.65
CCDC38-203ENST00000546803 ERASQ7Z444 233 aa10.97□□□□□ -0.65
CCDC38-203ENST00000546803 C2orf88Q9BSF0 95 aa10.97□□□□□ -0.65
CCDC38-203ENST00000546803 VCX2Q9H322 139 aa10.97□□□□□ -0.65
CCDC38-203ENST00000546803 IGHV1-58A0A0C4DH39 117 aa10.96□□□□□ -0.65
CCDC38-203ENST00000546803 COX7A2LO14548 114 aa10.96□□□□□ -0.65
CCDC38-203ENST00000546803 CDK2AP2O75956 126 aa10.96□□□□□ -0.65
CCDC38-203ENST00000546803 C15orf56Q8N910 161 aa10.96□□□□□ -0.65
CCDC38-203ENST00000546803 SCGB3A1Q96QR1 104 aa10.96□□□□□ -0.65
CCDC38-203ENST00000546803 AMELXQ99217 191 aa10.96□□□□□ -0.65
CCDC38-203ENST00000546803 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.66
CCDC38-203ENST00000546803 TRGC2P03986 189 aa10.95□□□□□ -0.66
CCDC38-203ENST00000546803 URB1-AS1Q96HZ7 61 aa10.95□□□□□ -0.66
CCDC38-203ENST00000546803 GVQW2A0A096LPI5 108 aaPredicted RBP10.94□□□□□ -0.66
CCDC38-203ENST00000546803 MALP21145 153 aa10.94□□□□□ -0.66
CCDC38-203ENST00000546803 CNBPP62633 177 aaKnown RBP10.94□□□□□ -0.66
CCDC38-203ENST00000546803 BIRC6Q9NR09 4857 aa10.93□□□□□ -0.66
CCDC38-203ENST00000546803 IGHV3OR16-9A0A0B4J2B5 98 aa10.93□□□□□ -0.66
CCDC38-203ENST00000546803 UBE2D1P51668 147 aa10.93□□□□□ -0.66
CCDC38-203ENST00000546803 LINC00173Q6ZV60 143 aa10.93□□□□□ -0.66
CCDC38-203ENST00000546803 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.92□□□□□ -0.66
CCDC38-203ENST00000546803 SCO1O75880 301 aa10.92□□□□□ -0.66
CCDC38-203ENST00000546803 APOMO95445 188 aa10.92□□□□□ -0.66
CCDC38-203ENST00000546803 HIGD2BQ4VC39 106 aa10.92□□□□□ -0.66
CCDC38-203ENST00000546803 LINC00242Q5T6M2 205 aa10.92□□□□□ -0.66
CCDC38-203ENST00000546803 C5orf38Q86SI9 138 aa10.92□□□□□ -0.66
CCDC38-203ENST00000546803 C9orf163Q8N9P6 203 aa10.92□□□□□ -0.66
CCDC38-203ENST00000546803 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
CCDC38-203ENST00000546803 HBDP02042 147 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms