RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
C12orf43-209ENST00000546272 TMEM242Q9NWH2 141 aa11.6□□□□□ -0.55
C12orf43-209ENST00000546272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.6□□□□□ -0.55
C12orf43-209ENST00000546272 TRBV27A0A0K0K1C4 114 aa11.6□□□□□ -0.55
C12orf43-209ENST00000546272 IGKV2-29A2NJV5 120 aaPredicted RBP11.6□□□□□ -0.55
C12orf43-209ENST00000546272 C1orf43Q9BWL3 253 aa11.6□□□□□ -0.55
C12orf43-209ENST00000546272 KRTAP9-6A0A140TA67 174 aa11.59□□□□□ -0.55
C12orf43-209ENST00000546272 SUMO2P61956 95 aaKnown RBP11.59□□□□□ -0.55
C12orf43-209ENST00000546272 MIAQ16674 131 aa11.59□□□□□ -0.55
C12orf43-209ENST00000546272 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
C12orf43-209ENST00000546272 D6R8Y8 96 aa11.58□□□□□ -0.56
C12orf43-209ENST00000546272 VCYO14598 125 aa11.58□□□□□ -0.56
C12orf43-209ENST00000546272 REG3AQ06141 175 aa11.58□□□□□ -0.56
C12orf43-209ENST00000546272 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
C12orf43-209ENST00000546272 BTF3L4Q96K17 158 aa11.58□□□□□ -0.56
C12orf43-209ENST00000546272 CTDSP1Q9GZU7 261 aa11.58□□□□□ -0.56
C12orf43-209ENST00000546272 TRBV24-1A0A075B6N3 115 aa11.57□□□□□ -0.56
C12orf43-209ENST00000546272 H7C423 109 aa11.57□□□□□ -0.56
C12orf43-209ENST00000546272 ESDP10768 282 aa11.57□□□□□ -0.56
C12orf43-209ENST00000546272 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
C12orf43-209ENST00000546272 IMMP2LQ96T52 175 aa11.57□□□□□ -0.56
C12orf43-209ENST00000546272 TNFRSF6BO95407 300 aa11.56□□□□□ -0.56
C12orf43-209ENST00000546272 FGF6P10767 208 aa11.56□□□□□ -0.56
C12orf43-209ENST00000546272 RNASEKQ6P5S7 137 aaKnown RBP11.56□□□□□ -0.56
C12orf43-209ENST00000546272 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
C12orf43-209ENST00000546272 CARHSP1Q9Y2V2 147 aaKnown RBP11.56□□□□□ -0.56
C12orf43-209ENST00000546272 PPBPP02775 128 aa11.55□□□□□ -0.56
C12orf43-209ENST00000546272 FCER1GP30273 86 aa11.55□□□□□ -0.56
C12orf43-209ENST00000546272 NPYP01303 97 aa11.54□□□□□ -0.56
C12orf43-209ENST00000546272 KIR2DL4Q99706 377 aa11.54□□□□□ -0.56
C12orf43-209ENST00000546272 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
C12orf43-209ENST00000546272 C7orf77A4D0Y5 90 aa11.53□□□□□ -0.56
C12orf43-209ENST00000546272 RPL32P62910 135 aaKnown RBP11.53□□□□□ -0.56
C12orf43-209ENST00000546272 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
C12orf43-209ENST00000546272 TMEM136Q6ZRR5 245 aa11.53□□□□□ -0.56
C12orf43-209ENST00000546272 ORMDL3Q8N138 153 aa11.53□□□□□ -0.56
C12orf43-209ENST00000546272 PHOX2AO14813 284 aa11.52□□□□□ -0.57
C12orf43-209ENST00000546272 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
C12orf43-209ENST00000546272 CLRN3Q8NCR9 226 aa11.52□□□□□ -0.57
C12orf43-209ENST00000546272 PRELID3AQ96N28 172 aa11.52□□□□□ -0.57
C12orf43-209ENST00000546272 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
C12orf43-209ENST00000546272 TRAV8-4A0A0B4J246 113 aa11.51□□□□□ -0.57
C12orf43-209ENST00000546272 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
C12orf43-209ENST00000546272 TRAV9-1A0A075B6T8 112 aa11.5□□□□□ -0.57
C12orf43-209ENST00000546272 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
C12orf43-209ENST00000546272 S100PP25815 95 aa11.5□□□□□ -0.57
C12orf43-209ENST00000546272 RHEBQ15382 184 aa11.5□□□□□ -0.57
C12orf43-209ENST00000546272 TMEM101Q96IK0 257 aa11.5□□□□□ -0.57
C12orf43-209ENST00000546272 RPS10P5Q9NQ39 176 aa11.5□□□□□ -0.57
C12orf43-209ENST00000546272 MRPL52Q86TS9 123 aaKnown RBP11.49□□□□□ -0.57
C12orf43-209ENST00000546272 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
C12orf43-209ENST00000546272 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
C12orf43-209ENST00000546272 APOC3P02656 99 aa11.48□□□□□ -0.57
C12orf43-209ENST00000546272 TCAPO15273 167 aa11.47□□□□□ -0.57
C12orf43-209ENST00000546272 CDC42SE2Q9NRR3 84 aa11.47□□□□□ -0.57
C12orf43-209ENST00000546272 LAMTOR2Q9Y2Q5 125 aa11.47□□□□□ -0.57
C12orf43-209ENST00000546272 C14orf177Q52M58 125 aa11.46□□□□□ -0.57
C12orf43-209ENST00000546272 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
C12orf43-209ENST00000546272 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
C12orf43-209ENST00000546272 LOC389332A0A1B0GUA5 103 aa11.45□□□□□ -0.58
C12orf43-209ENST00000546272 PRSS47A8MTI9 375 aa11.45□□□□□ -0.58
C12orf43-209ENST00000546272 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
C12orf43-209ENST00000546272 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
C12orf43-209ENST00000546272 MAP1LC3AQ9H492 121 aa11.45□□□□□ -0.58
C12orf43-209ENST00000546272 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
C12orf43-209ENST00000546272 SMAGPQ0VAQ4 97 aa11.44□□□□□ -0.58
C12orf43-209ENST00000546272 ZNF664Q8N3J9 261 aa11.44□□□□□ -0.58
C12orf43-209ENST00000546272 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
C12orf43-209ENST00000546272 CSDC2Q9Y534 153 aaKnown RBP11.44□□□□□ -0.58
C12orf43-209ENST00000546272 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
C12orf43-209ENST00000546272 RAB5AP20339 215 aa11.43□□□□□ -0.58
C12orf43-209ENST00000546272 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
C12orf43-209ENST00000546272 KIAA1644Q3SXP7 199 aa11.43□□□□□ -0.58
C12orf43-209ENST00000546272 SVBPQ8N300 66 aa11.43□□□□□ -0.58
C12orf43-209ENST00000546272 TIMM21Q9BVV7 248 aa11.43□□□□□ -0.58
C12orf43-209ENST00000546272 SNAPINO95295 136 aa11.42□□□□□ -0.58
C12orf43-209ENST00000546272 PRSS1P07477 247 aa11.42□□□□□ -0.58
C12orf43-209ENST00000546272 GNB1LQ9BYB4 327 aa11.42□□□□□ -0.58
C12orf43-209ENST00000546272 ODF1Q14990 250 aa11.41□□□□□ -0.58
C12orf43-209ENST00000546272 RNASE13Q5GAN3 156 aaKnown RBP11.41□□□□□ -0.58
C12orf43-209ENST00000546272 Q8N8P6 123 aa11.41□□□□□ -0.58
C12orf43-209ENST00000546272 COX19Q49B96 90 aa11.4□□□□□ -0.58
C12orf43-209ENST00000546272 Q6ZUT4 128 aa11.4□□□□□ -0.58
C12orf43-209ENST00000546272 CCL25O15444 150 aa11.39□□□□□ -0.59
C12orf43-209ENST00000546272 XCL1P47992 114 aa11.39□□□□□ -0.59
C12orf43-209ENST00000546272 SS18Q15532 418 aa11.39□□□□□ -0.59
C12orf43-209ENST00000546272 LINC01600Q96MT4 127 aa11.39□□□□□ -0.59
C12orf43-209ENST00000546272 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
C12orf43-209ENST00000546272 FOXI1Q12951 378 aa11.38□□□□□ -0.59
C12orf43-209ENST00000546272 TGIF2-C20orf24A0A0A6YYL0 155 aa11.37□□□□□ -0.59
C12orf43-209ENST00000546272 MT-ND6P03923 174 aa11.37□□□□□ -0.59
C12orf43-209ENST00000546272 SLC7A5P1Q8MH63 180 aa11.37□□□□□ -0.59
C12orf43-209ENST00000546272 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
C12orf43-209ENST00000546272 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
C12orf43-209ENST00000546272 OPRPNQ99935 248 aaPredicted RBP11.37□□□□□ -0.59
C12orf43-209ENST00000546272 MRPL18Q9H0U6 180 aaKnown RBP11.37□□□□□ -0.59
C12orf43-209ENST00000546272 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
C12orf43-209ENST00000546272 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
C12orf43-209ENST00000546272 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
C12orf43-209ENST00000546272 NXT2Q9NPJ8 142 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms