RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 CMYA5Q8N3K9 4069 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 IGHV3-38A0A0C4DH36 116 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 IGKV2-29A2NJV5 120 aaPredicted RBP3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 C11orf86A6NJI1 115 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 E9PLD3 99 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 DEFB130BP0DP73 79 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 DEFB130AP0DP74 79 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 NMUP48645 174 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 DAD1P61803 113 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 SBSPONQ8IVN8 264 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 TMEM243Q9BU79 118 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 SNHG12Q9BXW3 62 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 VCX2Q9H322 139 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 Q9UF83 564 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 TRRAPQ9Y4A5 3859 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 ANK2Q01484 3957 aa3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 FLNBO75369 2602 aaKnown RBP3.85□□□□□ -1.79
NPIPB3-214ENST00000545358 TRBV25-1A0A075B6N4 114 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 LOC100131303A0A0U1RQF7 123 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 ZNF561-AS1K7EIQ3 104 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 UBE2L6O14933 153 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 SPART-AS1P0CW21 52 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 ZNF25P17030 456 aaPredicted RBP3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 Q6ZUT4 128 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 C2orf91Q6ZV80 131 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 CHAC1Q9BUX1 264 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 HIGD1BQ9P298 99 aa3.84□□□□□ -1.79
NPIPB3-214ENST00000545358 JMJD1CQ15652 2540 aa3.84□□□□□ -1.8
NPIPB3-214ENST00000545358 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 TRAV26-1A0A087WT03 109 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 IGKV2D-26A0A0A0MRZ7 120 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 G3V4G9 280 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 ATP5G1P05496 136 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 GYPEP15421 78 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 ZNF22P17026 224 aaPredicted RBP3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 HSD52Q0P140 79 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 COL5A1-AS1Q5SY13 56 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 DGAT2L7PQ6IED9 249 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 NTM-AS1Q6ZSK4 140 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 FAM19A3Q7Z5A8 133 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 PCP2Q8IVA1 136 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 OPRPNQ99935 248 aaPredicted RBP3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 TP73-AS1Q9UF72 201 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 CELA1Q9UNI1 258 aa3.83□□□□□ -1.8
NPIPB3-214ENST00000545358 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 TRBV6-8A0A0A6YYG3 113 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 TRAV8-6A0A0B4J262 113 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 MYMXA0A1B0GTQ4 84 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 TMEM223A0PJW6 202 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 UBE2D1P51668 147 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 TCTAP57738 103 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 SEC11AP67812 179 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 BATFQ16520 125 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 KPRPQ5T749 579 aaPredicted RBP3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 AMMECR1LQ6DCA0 310 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 SH2D6Q7Z4S9 175 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 OR5A1Q8NGJ0 315 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 PLEKHB2Q96CS7 222 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 TMEM101Q96IK0 257 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 ATRQ13535 2644 aa3.82□□□□□ -1.8
NPIPB3-214ENST00000545358 A0A0J9YXV3 536 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 ZNF815PA8K554 130 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 H3BRM9 83 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 LEPROTO15243 131 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 DEFB4AO15263 64 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 TIRAPP58753 221 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 HERVK_113P63121 156 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 TAL2Q16559 108 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 BVES-AS1Q5T3Y7 98 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 GEMIN7Q9H840 131 aaKnown RBP3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 CDC42SE2Q9NRR3 84 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 NOTCH3Q9UM47 2321 aa3.81□□□□□ -1.8
NPIPB3-214ENST00000545358 A6NDN8 102 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 F5H768 121 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 H3BNG1 76 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 J3QQQ9 107 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 LGALS3P17931 250 aaKnown RBP3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 MRPL23Q16540 153 aaKnown RBP3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 RNASE13Q5GAN3 156 aaKnown RBP3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 LINC00469Q8N7U9 141 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 ORAOV1Q8WV07 137 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 TTTY13Q9BZ97 58 aa3.8□□□□□ -1.8
NPIPB3-214ENST00000545358 RETNQ9HD89 108 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms