RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 NCR2O95944 276 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 ADCYAP1P18509 176 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 AMTP48728 403 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 PRR3P79522 188 aaKnown RBP8.03□□□□□ -1.12
USP28-212ENST00000544750 REG3AQ06141 175 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
USP28-212ENST00000544750 A0A1B0GUV1 79 aa8.02□□□□□ -1.13
USP28-212ENST00000544750 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
USP28-212ENST00000544750 PNRC1Q12796 327 aaPredicted RBP8.02□□□□□ -1.13
USP28-212ENST00000544750 FAM104BQ5XKR9 115 aa8.02□□□□□ -1.13
USP28-212ENST00000544750 NRACQ8N912 160 aa8.02□□□□□ -1.13
USP28-212ENST00000544750 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
USP28-212ENST00000544750 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
USP28-212ENST00000544750 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
USP28-212ENST00000544750 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
USP28-212ENST00000544750 TSHBP01222 138 aa8.01□□□□□ -1.13
USP28-212ENST00000544750 CAMPP49913 170 aa8.01□□□□□ -1.13
USP28-212ENST00000544750 MRPL51Q4U2R6 128 aaKnown RBP8.01□□□□□ -1.13
USP28-212ENST00000544750 MRPL54Q6P161 138 aaKnown RBP8.01□□□□□ -1.13
USP28-212ENST00000544750 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8□□□□□ -1.13
USP28-212ENST00000544750 TRBV27A0A0K0K1C4 114 aa8□□□□□ -1.13
USP28-212ENST00000544750 A0A1B0GW15 77 aa8□□□□□ -1.13
USP28-212ENST00000544750 IGKV2-29A2NJV5 120 aaPredicted RBP8□□□□□ -1.13
USP28-212ENST00000544750 I3L3M4 83 aa8□□□□□ -1.13
USP28-212ENST00000544750 PPP1R2P9O14990 202 aa8□□□□□ -1.13
USP28-212ENST00000544750 HBBP68871 147 aa8□□□□□ -1.13
USP28-212ENST00000544750 UQCC3Q6UW78 93 aa8□□□□□ -1.13
USP28-212ENST00000544750 ST20Q9HBF5 79 aa8□□□□□ -1.13
USP28-212ENST00000544750 AP5S1Q9NUS5 200 aa8□□□□□ -1.13
USP28-212ENST00000544750 APCSP02743 223 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 ESDP10768 282 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 PMCHP20382 165 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 COX6A2Q02221 97 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
USP28-212ENST00000544750 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 C15orf56Q8N910 161 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 TMEM242Q9NWH2 141 aa7.99□□□□□ -1.13
USP28-212ENST00000544750 TMEM218A2RU14 115 aa7.98□□□□□ -1.13
USP28-212ENST00000544750 UBE2L6O14933 153 aa7.98□□□□□ -1.13
USP28-212ENST00000544750 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
USP28-212ENST00000544750 PRSS3P2Q8NHM4 247 aa7.98□□□□□ -1.13
USP28-212ENST00000544750 ANAPC16Q96DE5 110 aa7.98□□□□□ -1.13
USP28-212ENST00000544750 H7C423 109 aa7.97□□□□□ -1.13
USP28-212ENST00000544750 MT-ND4LP03901 98 aa7.97□□□□□ -1.13
USP28-212ENST00000544750 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
USP28-212ENST00000544750 MAJINQ3KP22 176 aa7.97□□□□□ -1.13
USP28-212ENST00000544750 REG3GQ6UW15 175 aa7.97□□□□□ -1.13
USP28-212ENST00000544750 COMMD7Q86VX2 200 aa7.97□□□□□ -1.13
USP28-212ENST00000544750 TRBV24-1A0A075B6N3 115 aa7.96□□□□□ -1.14
USP28-212ENST00000544750 LINC00862A6NCI5 91 aa7.96□□□□□ -1.14
USP28-212ENST00000544750 D6R8Y8 96 aa7.96□□□□□ -1.14
USP28-212ENST00000544750 S100A8P05109 93 aa7.96□□□□□ -1.14
USP28-212ENST00000544750 FGF6P10767 208 aa7.96□□□□□ -1.14
USP28-212ENST00000544750 STPG4Q8N801 248 aa7.96□□□□□ -1.14
USP28-212ENST00000544750 F8W036 122 aa7.95□□□□□ -1.14
USP28-212ENST00000544750 PPP1R17O96001 155 aa7.95□□□□□ -1.14
USP28-212ENST00000544750 CKS2P33552 79 aa7.95□□□□□ -1.14
USP28-212ENST00000544750 RPL32P62910 135 aaKnown RBP7.95□□□□□ -1.14
USP28-212ENST00000544750 SEC11CQ9BY50 192 aa7.95□□□□□ -1.14
USP28-212ENST00000544750 MUC2Q02817 5179 aa7.95□□□□□ -1.14
USP28-212ENST00000544750 A0A096LNI7 61 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 VCYO14598 125 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 NPYP01303 97 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
USP28-212ENST00000544750 AMMECR1LQ6DCA0 310 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 RNASEKQ6P5S7 137 aaKnown RBP7.94□□□□□ -1.14
USP28-212ENST00000544750 C20orf78Q9BR46 151 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
USP28-212ENST00000544750 C7orf77A4D0Y5 90 aa7.93□□□□□ -1.14
USP28-212ENST00000544750 C10orf91Q5T1B1 145 aa7.93□□□□□ -1.14
USP28-212ENST00000544750 MRPL52Q86TS9 123 aaKnown RBP7.93□□□□□ -1.14
USP28-212ENST00000544750 SMIM2Q9BVW6 85 aa7.93□□□□□ -1.14
USP28-212ENST00000544750 BTF3L4Q96K17 158 aa7.92□□□□□ -1.14
USP28-212ENST00000544750 IGKV3OR2-268A0A0C4DH90 116 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 GAGE12HA6NDE8 117 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 PPBPP02775 128 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 FCER1GP30273 86 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 HIGD2BQ4VC39 106 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 ORMDL3Q8N138 153 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 OR5A1Q8NGJ0 315 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 IMMP2LQ96T52 175 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 KIR2DL4Q99706 377 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 UBE2D4Q9Y2X8 147 aa7.91□□□□□ -1.14
USP28-212ENST00000544750 GVQW2A0A096LPI5 108 aaPredicted RBP7.9□□□□□ -1.14
USP28-212ENST00000544750 Q6ZRP5 223 aa7.9□□□□□ -1.14
USP28-212ENST00000544750 TMEM136Q6ZRR5 245 aa7.9□□□□□ -1.14
USP28-212ENST00000544750 CHCHD10Q8WYQ3 142 aaPredicted RBP7.9□□□□□ -1.14
USP28-212ENST00000544750 FAM104AQ969W3 186 aa7.9□□□□□ -1.14
USP28-212ENST00000544750 PRELID3AQ96N28 172 aa7.9□□□□□ -1.14
USP28-212ENST00000544750 CTDSP1Q9GZU7 261 aa7.9□□□□□ -1.14
USP28-212ENST00000544750 CARHSP1Q9Y2V2 147 aaKnown RBP7.9□□□□□ -1.14
USP28-212ENST00000544750 LINC00959A0A1B0GUT2 108 aa7.89□□□□□ -1.15
USP28-212ENST00000544750 PRSS47A8MTI9 375 aa7.89□□□□□ -1.15
USP28-212ENST00000544750 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
USP28-212ENST00000544750 FOXI1Q12951 378 aa7.89□□□□□ -1.15
USP28-212ENST00000544750 TMEM101Q96IK0 257 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms