RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-221ENST00000543545 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-221ENST00000543545 C6orf223Q8N319 242 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 ZNF664Q8N3J9 261 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 TOMM6Q96B49 74 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 URB1-AS1Q96HZ7 61 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
CPSF7-221ENST00000543545 KMT2CQ8NEZ4 4911 aaKnown RBP6.84□□□□□ -1.31
CPSF7-221ENST00000543545 LYSTQ99698 3801 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 LINC01549A6NIU2 74 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 SERF1AO75920 110 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 HBDP02042 147 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 NDUFA6P56556 154 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 RNASE13Q5GAN3 156 aaKnown RBP6.84□□□□□ -1.31
CPSF7-221ENST00000543545 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 Q6ZN92 141 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 NFE4Q86UQ8 179 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 RMI2Q96E14 147 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-221ENST00000543545 CDC42SE2Q9NRR3 84 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 CSDC2Q9Y534 153 aaKnown RBP6.84□□□□□ -1.31
CPSF7-221ENST00000543545 HYDINQ4G0P3 5121 aa6.84□□□□□ -1.31
CPSF7-221ENST00000543545 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 PSCAO43653 123 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 MIAQ16674 131 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 Q6ZUT4 128 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 TM2D2Q9BX73 214 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 VCX2Q9H322 139 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 PYGO1Q9Y3Y4 419 aa6.83□□□□□ -1.32
CPSF7-221ENST00000543545 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 TRAV13-1A0A0B4J241 112 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
CPSF7-221ENST00000543545 PAPPA-AS1Q5QFB9 102 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 ERASQ7Z444 233 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 FAM19A2Q8N3H0 131 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 TMEM141Q96I45 108 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 PRR34Q9NV39 138 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 KMT2AQ03164 3969 aa6.82□□□□□ -1.32
CPSF7-221ENST00000543545 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 TRAV8-4A0A0B4J246 113 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 IFITM10A6NMD0 228 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-221ENST00000543545 NUPR1O60356 82 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 SS18Q15532 418 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 TIMM17AQ99595 171 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 C2orf88Q9BSF0 95 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 COX11Q9Y6N1 276 aa6.81□□□□□ -1.32
CPSF7-221ENST00000543545 A0A096LNJ9 63 aa6.8□□□□□ -1.32
CPSF7-221ENST00000543545 LINC00959A0A1B0GUT2 108 aa6.8□□□□□ -1.32
CPSF7-221ENST00000543545 ATP5LO75964 103 aa6.8□□□□□ -1.32
CPSF7-221ENST00000543545 XCL1P47992 114 aa6.8□□□□□ -1.32
CPSF7-221ENST00000543545 LINC00310P59036 64 aa6.8□□□□□ -1.32
CPSF7-221ENST00000543545 ZC2HC1BQ5TFG8 222 aa6.8□□□□□ -1.32
CPSF7-221ENST00000543545 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
CPSF7-221ENST00000543545 CCL25O15444 150 aa6.79□□□□□ -1.32
CPSF7-221ENST00000543545 S100A6P06703 90 aa6.79□□□□□ -1.32
CPSF7-221ENST00000543545 NPSP0C0P6 89 aa6.79□□□□□ -1.32
CPSF7-221ENST00000543545 FABP4P15090 132 aa6.79□□□□□ -1.32
CPSF7-221ENST00000543545 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
CPSF7-221ENST00000543545 CHCHD10Q8WYQ3 142 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-221ENST00000543545 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
CPSF7-221ENST00000543545 PRSS1P07477 247 aa6.78□□□□□ -1.32
CPSF7-221ENST00000543545 FAM104AQ969W3 186 aa6.78□□□□□ -1.32
CPSF7-221ENST00000543545 HSPB8Q9UJY1 196 aa6.78□□□□□ -1.32
CPSF7-221ENST00000543545 RTL8CO15255 209 aa6.77□□□□□ -1.33
CPSF7-221ENST00000543545 PMVKQ15126 192 aa6.77□□□□□ -1.33
CPSF7-221ENST00000543545 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
CPSF7-221ENST00000543545 BAALCQ8WXS3 180 aa6.77□□□□□ -1.33
CPSF7-221ENST00000543545 IFI27L1Q96BM0 104 aa6.77□□□□□ -1.33
CPSF7-221ENST00000543545 AMELXQ99217 191 aa6.77□□□□□ -1.33
CPSF7-221ENST00000543545 CST9LQ9H4G1 147 aa6.77□□□□□ -1.33
CPSF7-221ENST00000543545 RYR3Q15413 4870 aa6.76□□□□□ -1.33
CPSF7-221ENST00000543545 PRSS29PA6NIE9 313 aa6.76□□□□□ -1.33
CPSF7-221ENST00000543545 H0Y8G0 127 aa6.76□□□□□ -1.33
CPSF7-221ENST00000543545 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
CPSF7-221ENST00000543545 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
CPSF7-221ENST00000543545 LINC00336Q6ZUF6 198 aa6.76□□□□□ -1.33
CPSF7-221ENST00000543545 LINC00173Q6ZV60 143 aa6.76□□□□□ -1.33
CPSF7-221ENST00000543545 EREGO14944 169 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 LECT2O14960 151 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 MALP21145 153 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 S100A2P29034 98 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 UBE2D1P51668 147 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 TNP2Q05952 138 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 C5orf38Q86SI9 138 aa6.75□□□□□ -1.33
CPSF7-221ENST00000543545 GEMIN7Q9H840 131 aaKnown RBP6.75□□□□□ -1.33
CPSF7-221ENST00000543545 A0A0J9YXV3 536 aa6.74□□□□□ -1.33
CPSF7-221ENST00000543545 COX7A2LO14548 114 aa6.74□□□□□ -1.33
CPSF7-221ENST00000543545 SEC11AP67812 179 aa6.74□□□□□ -1.33
CPSF7-221ENST00000543545 FOXI1Q12951 378 aa6.74□□□□□ -1.33
CPSF7-221ENST00000543545 LINC00242Q5T6M2 205 aa6.74□□□□□ -1.33
CPSF7-221ENST00000543545 CFAP161Q6P656 301 aa6.74□□□□□ -1.33
CPSF7-221ENST00000543545 MAPKAPK5-AS1Q8N8E1 139 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms