RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 CAMK2N2Q96S95 79 aa14.4□□□□□ -0.1
SUDS3-204ENST00000543473 ZFYVE26Q68DK2 2539 aa14.4□□□□□ -0.1
SUDS3-204ENST00000543473 CPAMD8Q8IZJ3 1885 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 UPK3BQ9BT76 320 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 JMJD1CQ15652 2540 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 H7C423 109 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 PROK1P58294 105 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 MAP6D1Q9H9H5 199 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 IGHV4-28A0A0C4DH34 117 aa14.39□□□□□ -0.11
SUDS3-204ENST00000543473 TNFRSF13BO14836 293 aaPredicted RBP14.39□□□□□ -0.11
SUDS3-204ENST00000543473 IGIPA6NJ69 53 aa14.38□□□□□ -0.11
SUDS3-204ENST00000543473 Q8N6K4 173 aa14.38□□□□□ -0.11
SUDS3-204ENST00000543473 TIMM17BO60830 172 aa14.38□□□□□ -0.11
SUDS3-204ENST00000543473 NDUFC2O95298 119 aa14.38□□□□□ -0.11
SUDS3-204ENST00000543473 Q6ZTI0 123 aa14.38□□□□□ -0.11
SUDS3-204ENST00000543473 ESM1Q9NQ30 184 aa14.38□□□□□ -0.11
SUDS3-204ENST00000543473 Q6Q795 121 aa14.37□□□□□ -0.11
SUDS3-204ENST00000543473 PRRC2AP48634 2157 aaKnown RBP14.37□□□□□ -0.11
SUDS3-204ENST00000543473 PDE6GP18545 87 aa14.37□□□□□ -0.11
SUDS3-204ENST00000543473 UBE2D3P61077 147 aa14.37□□□□□ -0.11
SUDS3-204ENST00000543473 UBE2D2P62837 147 aa14.37□□□□□ -0.11
SUDS3-204ENST00000543473 SLPIP03973 132 aa14.37□□□□□ -0.11
SUDS3-204ENST00000543473 UBE2DNLQ8IWF7 75 aa14.36□□□□□ -0.11
SUDS3-204ENST00000543473 WFDC11Q8NEX6 87 aa14.36□□□□□ -0.11
SUDS3-204ENST00000543473 COL5A1P20908 1838 aaPredicted RBP14.36□□□□□ -0.11
SUDS3-204ENST00000543473 SPAG11BQ08648 103 aa14.36□□□□□ -0.11
SUDS3-204ENST00000543473 C5orf47Q569G3 176 aa14.36□□□□□ -0.11
SUDS3-204ENST00000543473 IGKV2D-24A0A075B6R9 120 aa14.36□□□□□ -0.11
SUDS3-204ENST00000543473 ABCA12Q86UK0 2595 aa14.36□□□□□ -0.11
SUDS3-204ENST00000543473 DIRC1Q969H9 104 aa14.35□□□□□ -0.11
SUDS3-204ENST00000543473 KLLNB2CW77 178 aa14.35□□□□□ -0.11
SUDS3-204ENST00000543473 CLPSL1A2RUU4 121 aa14.35□□□□□ -0.11
SUDS3-204ENST00000543473 CRYGDP07320 174 aa14.35□□□□□ -0.11
SUDS3-204ENST00000543473 CRIP2P52943 208 aaPredicted RBP14.34□□□□□ -0.11
SUDS3-204ENST00000543473 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
SUDS3-204ENST00000543473 SETD2Q9BYW2 2564 aaPredicted RBP14.34□□□□□ -0.11
SUDS3-204ENST00000543473 LRRC75A-AS1Q8N1F1 130 aa14.33□□□□□ -0.12
SUDS3-204ENST00000543473 COX8CQ7Z4L0 72 aa14.33□□□□□ -0.12
SUDS3-204ENST00000543473 ETDCA0A1B0GVM5 59 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 ATP5EP2Q5VTU8 51 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 ENHOQ6UWT2 76 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 SERP2Q8N6R1 65 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 COX7CP15954 63 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 FAM236DA0A1B0GTK5 79 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 IBA57-AS1B1ANH7 110 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 IGHV4-31P0DP07 118 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 FAM236CP0DP71 79 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 HIGD2BQ4VC39 106 aa14.32□□□□□ -0.12
SUDS3-204ENST00000543473 PSMG3-AS1Q96PY0 264 aa14.31□□□□□ -0.12
SUDS3-204ENST00000543473 USP17L23D6RBM5 183 aa14.31□□□□□ -0.12
SUDS3-204ENST00000543473 RPL18AQ02543 176 aaKnown RBP14.31□□□□□ -0.12
SUDS3-204ENST00000543473 C4orf3Q8WVX3 66 aa14.31□□□□□ -0.12
SUDS3-204ENST00000543473 IGLV4-69A0A075B6H9 119 aa14.3□□□□□ -0.12
SUDS3-204ENST00000543473 FAM240AA0A1B0GVK7 77 aa14.3□□□□□ -0.12
SUDS3-204ENST00000543473 POM121L12Q8N7R1 296 aa14.3□□□□□ -0.12
SUDS3-204ENST00000543473 BRK1Q8WUW1 75 aa14.3□□□□□ -0.12
SUDS3-204ENST00000543473 PRB2P02812 416 aaPredicted RBP14.3□□□□□ -0.12
SUDS3-204ENST00000543473 UBE2BP63146 152 aa14.3□□□□□ -0.12
SUDS3-204ENST00000543473 C9orf85Q96MD7 179 aa14.3□□□□□ -0.12
SUDS3-204ENST00000543473 DNAJC9-AS1A6NH13 148 aa14.29□□□□□ -0.12
SUDS3-204ENST00000543473 MRPS36P82909 103 aaKnown RBP14.29□□□□□ -0.12
SUDS3-204ENST00000543473 IGLV2-18A0A075B6J9 118 aa14.29□□□□□ -0.12
SUDS3-204ENST00000543473 TSPEAR-AS2P59090 65 aa14.29□□□□□ -0.12
SUDS3-204ENST00000543473 CHD7Q9P2D1 2997 aa14.29□□□□□ -0.12
SUDS3-204ENST00000543473 PRRC2CQ9Y520 2896 aaKnown RBP14.28□□□□□ -0.12
SUDS3-204ENST00000543473 UBE2D4Q9Y2X8 147 aa14.28□□□□□ -0.12
SUDS3-204ENST00000543473 FAM222AQ5U5X8 452 aa14.28□□□□□ -0.12
SUDS3-204ENST00000543473 PRO0255Q9UI72 69 aa14.28□□□□□ -0.12
SUDS3-204ENST00000543473 AGRNO00468 2067 aa14.28□□□□□ -0.12
SUDS3-204ENST00000543473 FASNP49327 2511 aaKnown RBP14.27□□□□□ -0.12
SUDS3-204ENST00000543473 ZNF462Q96JM2 2506 aa14.27□□□□□ -0.12
SUDS3-204ENST00000543473 KLK12Q9UKR0 248 aa14.27□□□□□ -0.12
SUDS3-204ENST00000543473 HTTP42858 3142 aa14.27□□□□□ -0.13
SUDS3-204ENST00000543473 SPART-AS1P0CW21 52 aa14.27□□□□□ -0.13
SUDS3-204ENST00000543473 WFDC9Q8NEX5 89 aa14.27□□□□□ -0.13
SUDS3-204ENST00000543473 MP68P56378 58 aa14.26□□□□□ -0.13
SUDS3-204ENST00000543473 RMI2Q96E14 147 aa14.25□□□□□ -0.13
SUDS3-204ENST00000543473 COX7BP24311 80 aa14.25□□□□□ -0.13
SUDS3-204ENST00000543473 C9orf66Q5T8R8 295 aa14.25□□□□□ -0.13
SUDS3-204ENST00000543473 F8W735 103 aaPredicted RBP14.24□□□□□ -0.13
SUDS3-204ENST00000543473 RANBP2P49792 3224 aaKnown RBP14.24□□□□□ -0.13
SUDS3-204ENST00000543473 C10orf99Q6UWK7 81 aa14.24□□□□□ -0.13
SUDS3-204ENST00000543473 Q6YL49 198 aa14.24□□□□□ -0.13
SUDS3-204ENST00000543473 LINC00694P0DN24 101 aa14.23□□□□□ -0.13
SUDS3-204ENST00000543473 CDIP1Q9H305 208 aa14.23□□□□□ -0.13
SUDS3-204ENST00000543473 DEFB114Q30KQ6 69 aa14.23□□□□□ -0.13
SUDS3-204ENST00000543473 EPG5Q9HCE0 2579 aa14.23□□□□□ -0.13
SUDS3-204ENST00000543473 DEFB4AO15263 64 aa14.22□□□□□ -0.13
SUDS3-204ENST00000543473 LINC00269Q8N2A0 174 aa14.22□□□□□ -0.13
SUDS3-204ENST00000543473 DCANP1Q8TF63 244 aa14.22□□□□□ -0.13
SUDS3-204ENST00000543473 C6orf99Q4VX62 202 aa14.21□□□□□ -0.13
SUDS3-204ENST00000543473 BPY2O14599 106 aa14.21□□□□□ -0.13
SUDS3-204ENST00000543473 FAM110AQ9BQ89 295 aa14.21□□□□□ -0.13
SUDS3-204ENST00000543473 Q6ZSV7 163 aa14.21□□□□□ -0.13
SUDS3-204ENST00000543473 SCXQ7RTU7 201 aa14.21□□□□□ -0.14
SUDS3-204ENST00000543473 SMIM11BQ8TCY0 68 aa14.2□□□□□ -0.14
SUDS3-204ENST00000543473 COL4A2P08572 1712 aa14.2□□□□□ -0.14
SUDS3-204ENST00000543473 PRM2P04554 102 aa14.19□□□□□ -0.14
SUDS3-204ENST00000543473 TRBV6-8A0A0A6YYG3 113 aa14.19□□□□□ -0.14
SUDS3-204ENST00000543473 DEFB135Q30KP9 77 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms