RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 CHCHD5Q9BSY4 110 aa12.21□□□□□ -0.45
TMED3-204ENST00000543455 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.46
TMED3-204ENST00000543455 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.46
TMED3-204ENST00000543455 RPL39LQ96EH5 51 aaKnown RBP12.21□□□□□ -0.46
TMED3-204ENST00000543455 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
TMED3-204ENST00000543455 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
TMED3-204ENST00000543455 IQCJQ1A5X6 159 aa12.2□□□□□ -0.46
TMED3-204ENST00000543455 Q5VSD8 79 aa12.2□□□□□ -0.46
TMED3-204ENST00000543455 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
TMED3-204ENST00000543455 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
TMED3-204ENST00000543455 ANGP03950 147 aaKnown RBP12.19□□□□□ -0.46
TMED3-204ENST00000543455 RBX1P62877 108 aa12.19□□□□□ -0.46
TMED3-204ENST00000543455 GAGE6Q13070 117 aa12.19□□□□□ -0.46
TMED3-204ENST00000543455 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
TMED3-204ENST00000543455 Q6ZSA8 131 aa12.19□□□□□ -0.46
TMED3-204ENST00000543455 SNRPEP62304 92 aaKnown RBP12.18□□□□□ -0.46
TMED3-204ENST00000543455 LINC01620Q4KN68 170 aa12.18□□□□□ -0.46
TMED3-204ENST00000543455 MAP1LC3AQ9H492 121 aa12.18□□□□□ -0.46
TMED3-204ENST00000543455 TRBV25-1A0A075B6N4 114 aa12.17□□□□□ -0.46
TMED3-204ENST00000543455 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
TMED3-204ENST00000543455 COA6Q5JTJ3 125 aaKnown RBP12.17□□□□□ -0.46
TMED3-204ENST00000543455 KRTAP26-1Q6PEX3 210 aa12.17□□□□□ -0.46
TMED3-204ENST00000543455 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
TMED3-204ENST00000543455 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
TMED3-204ENST00000543455 NDUFA6P56556 154 aa12.16□□□□□ -0.46
TMED3-204ENST00000543455 RPL32P62910 135 aaKnown RBP12.16□□□□□ -0.46
TMED3-204ENST00000543455 BAGE3Q86Y29 109 aa12.16□□□□□ -0.46
TMED3-204ENST00000543455 DEFB104AQ8WTQ1 72 aa12.16□□□□□ -0.46
TMED3-204ENST00000543455 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
TMED3-204ENST00000543455 LOC389332A0A1B0GUA5 103 aa12.15□□□□□ -0.46
TMED3-204ENST00000543455 POLR2KP53803 58 aaKnown RBP12.15□□□□□ -0.46
TMED3-204ENST00000543455 PKIAP61925 76 aa12.15□□□□□ -0.46
TMED3-204ENST00000543455 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
TMED3-204ENST00000543455 CRPP02741 224 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 PRSS3P2Q8NHM4 247 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 URB1-AS1Q96HZ7 61 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 SMIM2Q9BVW6 85 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
TMED3-204ENST00000543455 SRRM2Q9UQ35 2752 aaKnown RBP12.14□□□□□ -0.47
TMED3-204ENST00000543455 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 PMCHP20382 165 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
TMED3-204ENST00000543455 LINC00310P59036 64 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 LINC00269Q8N2A0 174 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 Q8N8P6 123 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 C20orf203Q8NBC4 194 aa12.14□□□□□ -0.47
TMED3-204ENST00000543455 SERF1AO75920 110 aa12.13□□□□□ -0.47
TMED3-204ENST00000543455 MIAQ16674 131 aa12.13□□□□□ -0.47
TMED3-204ENST00000543455 MYCBP2O75592 4640 aa12.13□□□□□ -0.47
TMED3-204ENST00000543455 IGLV4-60A0A075B6I1 120 aa12.12□□□□□ -0.47
TMED3-204ENST00000543455 TRBV27A0A0K0K1C4 114 aa12.12□□□□□ -0.47
TMED3-204ENST00000543455 LINC01546A6NGU7 62 aa12.12□□□□□ -0.47
TMED3-204ENST00000543455 VCYO14598 125 aa12.12□□□□□ -0.47
TMED3-204ENST00000543455 LINC00614P0C842 121 aa12.12□□□□□ -0.47
TMED3-204ENST00000543455 CHCHD1Q96BP2 118 aaKnown RBP12.12□□□□□ -0.47
TMED3-204ENST00000543455 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
TMED3-204ENST00000543455 ESDP10768 282 aa12.11□□□□□ -0.47
TMED3-204ENST00000543455 FA2HQ7L5A8 372 aa12.11□□□□□ -0.47
TMED3-204ENST00000543455 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
TMED3-204ENST00000543455 USP17L23D6RBM5 183 aa12.1□□□□□ -0.47
TMED3-204ENST00000543455 NUPR1O60356 82 aa12.1□□□□□ -0.47
TMED3-204ENST00000543455 INAFM2P0DMQ5 153 aa12.1□□□□□ -0.47
TMED3-204ENST00000543455 RNASEKQ6P5S7 137 aaKnown RBP12.1□□□□□ -0.47
TMED3-204ENST00000543455 A0A1B0GUV1 79 aa12.09□□□□□ -0.47
TMED3-204ENST00000543455 I3L3M4 83 aa12.09□□□□□ -0.47
TMED3-204ENST00000543455 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
TMED3-204ENST00000543455 K7EMI3 77 aa12.08□□□□□ -0.47
TMED3-204ENST00000543455 REG3AQ06141 175 aa12.08□□□□□ -0.47
TMED3-204ENST00000543455 PRSS1P07477 247 aa12.08□□□□□ -0.48
TMED3-204ENST00000543455 S100A2P29034 98 aa12.08□□□□□ -0.48
TMED3-204ENST00000543455 COTL1Q14019 142 aa12.08□□□□□ -0.48
TMED3-204ENST00000543455 KIR2DL4Q99706 377 aa12.08□□□□□ -0.48
TMED3-204ENST00000543455 HERC1Q15751 4861 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 IGLV10-54A0A075B6I4 117 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 TCAPO15273 167 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 HSBP1O75506 76 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 AMTP48728 403 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 AKR1D1P51857 326 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 HIST3H2BBQ8N257 126 aa12.07□□□□□ -0.48
TMED3-204ENST00000543455 FAM229AH3BQW9 127 aa12.06□□□□□ -0.48
TMED3-204ENST00000543455 TSHBP01222 138 aa12.06□□□□□ -0.48
TMED3-204ENST00000543455 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
TMED3-204ENST00000543455 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
TMED3-204ENST00000543455 FCER1GP30273 86 aa12.03□□□□□ -0.48
TMED3-204ENST00000543455 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
TMED3-204ENST00000543455 PACRGQ96M98 296 aaPredicted RBP12.03□□□□□ -0.48
TMED3-204ENST00000543455 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
TMED3-204ENST00000543455 PMCHL1Q16048 86 aa12.02□□□□□ -0.48
TMED3-204ENST00000543455 PDZD11Q5EBL8 140 aa12.02□□□□□ -0.48
TMED3-204ENST00000543455 LINC00528Q8N1L1 170 aa12.02□□□□□ -0.48
TMED3-204ENST00000543455 FAM19A2Q8N3H0 131 aa12.02□□□□□ -0.48
TMED3-204ENST00000543455 A0A096LNJ9 63 aa12.02□□□□□ -0.49
TMED3-204ENST00000543455 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
TMED3-204ENST00000543455 UBE2L6O14933 153 aa12.02□□□□□ -0.49
TMED3-204ENST00000543455 SMIM6P0DI80 62 aa12.02□□□□□ -0.49
TMED3-204ENST00000543455 CIRBP-AS1Q8TBR5 109 aa12.02□□□□□ -0.49
TMED3-204ENST00000543455 DMBT1Q9UGM3 2413 aaPredicted RBP12.01□□□□□ -0.49
TMED3-204ENST00000543455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms