RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	LINC01546	A6NGU7	62 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	HERV-K104	P63124	156 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	MRPL23	Q16540	153 aa	Known RBP	5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	LINC01620	Q4KN68	170 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	MUSTN1	Q8IVN3	82 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341		Q8N1Y9	231 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	PKD1L1	Q8TDX9	2849 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	DEFB114	Q30KQ6	69 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	SLC25A29	Q8N8R3	303 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TMEM141	Q96I45	108 aa		5.4	□□□□□ -1.55
GTF2H3-212	ENST00000543341		A8MZ25	164 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	MEIG1	Q5JSS6	88 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	ZFAND2A	Q8N6M9	145 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	JPT2	Q9H910	190 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TEX49	A0A1B0GTD5	131 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341		K7EQG2	157 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341		M0R2P5	195 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	DEFB136	Q30KP8	78 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	C3orf56	Q8N813	242 aa		5.39	□□□□□ -1.55
GTF2H3-212	ENST00000543341	CCDC179	H3BU77	68 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGHV3-30	P01768	117 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGHV3-30-5	P0DP03	117 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	PEMT	Q9UBM1	199 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TRAV8-3	A0A0A6YYJ7	113 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	OPRPN	Q99935	248 aa	Predicted RBP	5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	LENEP	Q9Y5L5	61 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TRAV12-2	A0A075B6T6	113 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TRBV7-9	A0A0J9YWB2	115 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341		J3QL48	77 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	ZNF561-AS1	K7EIQ3	104 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	RHOD	O00212	210 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	ZNF876P	Q49A33	203 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	HIST2H2BD	Q6DRA6	164 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	DGAT2L7P	Q6IED9	249 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	ODF3	Q96PU9	254 aa		5.38	□□□□□ -1.55
GTF2H3-212	ENST00000543341	NACA	E9PAV3	2078 aa		5.37	□□□□□ -1.55
GTF2H3-212	ENST00000543341		A0A0U1RRA0	63 aa		5.37	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGHV3-33	P01772	117 aa		5.37	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGHV4-4	A0A075B6R2	117 aa		5.37	□□□□□ -1.55
GTF2H3-212	ENST00000543341		A0A0J9YXV3	536 aa		5.37	□□□□□ -1.55
GTF2H3-212	ENST00000543341	SYNJ2BP	P57105	145 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	SUMO4	Q6EEV6	95 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TIMM21	Q9BVV7	248 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	DNAH1	Q9P2D7	4330 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TRBV10-2	A0A0K0K1G8	114 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	LEPROT	O15243	131 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	DUX3	Q96PT4	197 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TIMM17A	Q99595	171 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	GHRH	P01286	108 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TSPEAR-AS2	P59090	65 aa		5.36	□□□□□ -1.55
GTF2H3-212	ENST00000543341	DNAH6	Q9C0G6	4158 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGHV3-73	A0A0B4J1V6	119 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	CRYGD	P07320	174 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	RNASE3	P12724	160 aa	Known RBP	5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	CIRBP	Q14011	172 aa	Known RBP	5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	SPINK13	Q1W4C9	94 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	ZNRF2	Q8NHG8	242 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TMEM101	Q96IK0	257 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	LINC00467	Q9BRT7	94 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	SPANXA1	Q9NS26	97 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	NDUFA12	Q9UI09	145 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGLV4-69	A0A075B6H9	119 aa		5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	RPL32	P62910	135 aa	Known RBP	5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	RNASE13	Q5GAN3	156 aa	Known RBP	5.35	□□□□□ -1.55
GTF2H3-212	ENST00000543341	NBEAL1	Q6ZS30	2694 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	KHDC1L	Q5JSQ8	128 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	C9orf66	Q5T8R8	295 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	CLEC2B	Q92478	149 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TNFRSF18	Q9Y5U5	241 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341		A0A0B4J2C4	111 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	IGIP	A6NJ69	53 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	SNRPD3	P62318	126 aa	Known RBP	5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	CHCHD5	Q9BSY4	110 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	ICOS	Q9Y6W8	199 aa		5.34	□□□□□ -1.55
GTF2H3-212	ENST00000543341	TRIAP1	O43715	76 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	C9orf153	Q5TBE3	101 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	TMEM61	Q8N0U2	210 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	MDFIC	Q9P1T7	246 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	LYST	Q99698	3801 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341		P0DMU3	169 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	FAM231A	P0DMU4	169 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	FAM231C	P0DMU5	169 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	KRTAP10-11	P60412	298 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	ODF3L2	Q3SX64	289 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	TMEM263	Q8WUH6	116 aa	Known RBP	5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	ZNF625	Q96I27	306 aa	Predicted RBP	5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	MGAM2	Q2M2H8	2515 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341		A0A0J9YXY3	114 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341		I3L3M4	83 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	TSHB	P01222	138 aa		5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	POLR2K	P53803	58 aa	Known RBP	5.33	□□□□□ -1.56
GTF2H3-212	ENST00000543341	TRGV11	A0A075B6L2	103 aa		5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	FAM236A	A0A1B0GUQ0	79 aa		5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	FAM236B	A0A1B0GV22	79 aa		5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	GIG44	P09565	113 aa	Predicted RBP	5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	IGHV3-30-3	P0DP02	117 aa		5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	MED14OS	P0DP75	135 aa		5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	ZNF22	P17026	224 aa	Predicted RBP	5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	TMEM223	A0PJW6	202 aa		5.32	□□□□□ -1.56
GTF2H3-212	ENST00000543341	KNCN	A6PVL3	124 aa		5.32	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms