RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 OR5A1Q8NGJ0 315 aa12.14□□□□□ -0.47
COPS7A-216ENST00000543170 BAALCQ8WXS3 180 aa12.14□□□□□ -0.47
COPS7A-216ENST00000543170 MAP1LC3AQ9H492 121 aa12.14□□□□□ -0.47
COPS7A-216ENST00000543170 RYR1P21817 5038 aa12.13□□□□□ -0.47
COPS7A-216ENST00000543170 MT-ND6P03923 174 aa12.13□□□□□ -0.47
COPS7A-216ENST00000543170 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
COPS7A-216ENST00000543170 UBE2D4Q9Y2X8 147 aa12.12□□□□□ -0.47
COPS7A-216ENST00000543170 HERC2O95714 4834 aa12.12□□□□□ -0.47
COPS7A-216ENST00000543170 C14orf177Q52M58 125 aa12.11□□□□□ -0.47
COPS7A-216ENST00000543170 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
COPS7A-216ENST00000543170 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
COPS7A-216ENST00000543170 IGLV10-54A0A075B6I4 117 aa12.1□□□□□ -0.47
COPS7A-216ENST00000543170 IGLV5-52A0A0A0MRZ9 124 aa12.1□□□□□ -0.47
COPS7A-216ENST00000543170 LECT2O14960 151 aa12.1□□□□□ -0.47
COPS7A-216ENST00000543170 RAB5AP20339 215 aa12.1□□□□□ -0.47
COPS7A-216ENST00000543170 K7EMI3 77 aa12.09□□□□□ -0.47
COPS7A-216ENST00000543170 ZNF664Q8N3J9 261 aa12.09□□□□□ -0.47
COPS7A-216ENST00000543170 Q8N8P6 123 aa12.09□□□□□ -0.47
COPS7A-216ENST00000543170 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
COPS7A-216ENST00000543170 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
COPS7A-216ENST00000543170 SPANXA1Q9NS26 97 aa12.08□□□□□ -0.48
COPS7A-216ENST00000543170 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
COPS7A-216ENST00000543170 USP17L23D6RBM5 183 aa12.07□□□□□ -0.48
COPS7A-216ENST00000543170 CDK2AP2O75956 126 aa12.07□□□□□ -0.48
COPS7A-216ENST00000543170 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
COPS7A-216ENST00000543170 TGIF2-C20orf24A0A0A6YYL0 155 aa12.06□□□□□ -0.48
COPS7A-216ENST00000543170 LOC389332A0A1B0GUA5 103 aa12.06□□□□□ -0.48
COPS7A-216ENST00000543170 GCSHP23434 173 aa12.06□□□□□ -0.48
COPS7A-216ENST00000543170 RPL39P62891 51 aaKnown RBP12.06□□□□□ -0.48
COPS7A-216ENST00000543170 KIAA1644Q3SXP7 199 aa12.06□□□□□ -0.48
COPS7A-216ENST00000543170 SLC7A5P1Q8MH63 180 aa12.06□□□□□ -0.48
COPS7A-216ENST00000543170 CHCHD10Q8WYQ3 142 aaPredicted RBP12.06□□□□□ -0.48
COPS7A-216ENST00000543170 LINC00959A0A1B0GUT2 108 aa12.05□□□□□ -0.48
COPS7A-216ENST00000543170 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
COPS7A-216ENST00000543170 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
COPS7A-216ENST00000543170 HSPG2P98160 4391 aa12.04□□□□□ -0.48
COPS7A-216ENST00000543170 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.04□□□□□ -0.48
COPS7A-216ENST00000543170 CCL25O15444 150 aa12.04□□□□□ -0.48
COPS7A-216ENST00000543170 MRPS36P82909 103 aaKnown RBP12.04□□□□□ -0.48
COPS7A-216ENST00000543170 Q6ZUT4 128 aa12.04□□□□□ -0.48
COPS7A-216ENST00000543170 ALKBH7Q9BT30 221 aaPredicted RBP12.04□□□□□ -0.48
COPS7A-216ENST00000543170 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
COPS7A-216ENST00000543170 GAGE12HA6NDE8 117 aa12.03□□□□□ -0.48
COPS7A-216ENST00000543170 SS18Q15532 418 aa12.03□□□□□ -0.48
COPS7A-216ENST00000543170 YPEL4Q96NS1 127 aa12.03□□□□□ -0.48
COPS7A-216ENST00000543170 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
COPS7A-216ENST00000543170 IFI27P40305 119 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-216ENST00000543170 KRTAP10-1P60331 282 aa12.02□□□□□ -0.49
COPS7A-216ENST00000543170 FABP9Q0Z7S8 132 aa12.02□□□□□ -0.49
COPS7A-216ENST00000543170 FOXI1Q12951 378 aa12.02□□□□□ -0.49
COPS7A-216ENST00000543170 FAM104AQ969W3 186 aa12.01□□□□□ -0.49
COPS7A-216ENST00000543170 CYSLTR1Q9Y271 337 aa12.01□□□□□ -0.49
COPS7A-216ENST00000543170 TRAPPC1Q9Y5R8 145 aa12.01□□□□□ -0.49
COPS7A-216ENST00000543170 C1orf196B1AJZ1 125 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 PRSS1P07477 247 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 NPSP0C0P6 89 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 G0S2P27469 103 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 CFAP161Q6P656 301 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 CD164L2Q6UWJ8 174 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 C2orf66Q6UXQ4 117 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 SMCO4Q9NRQ5 59 aa12□□□□□ -0.49
COPS7A-216ENST00000543170 LINC01546A6NGU7 62 aa11.99□□□□□ -0.49
COPS7A-216ENST00000543170 XCL1P47992 114 aa11.99□□□□□ -0.49
COPS7A-216ENST00000543170 RNASE13Q5GAN3 156 aaKnown RBP11.99□□□□□ -0.49
COPS7A-216ENST00000543170 C15orf56Q8N910 161 aa11.98□□□□□ -0.49
COPS7A-216ENST00000543170 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
COPS7A-216ENST00000543170 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
COPS7A-216ENST00000543170 CBLN2Q8IUK8 224 aa11.97□□□□□ -0.49
COPS7A-216ENST00000543170 TRAV13-1A0A0B4J241 112 aa11.96□□□□□ -0.49
COPS7A-216ENST00000543170 hDV102S1A0JD36 115 aa11.96□□□□□ -0.49
COPS7A-216ENST00000543170 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
COPS7A-216ENST00000543170 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
COPS7A-216ENST00000543170 TMEM141Q96I45 108 aa11.96□□□□□ -0.49
COPS7A-216ENST00000543170 GVQW2A0A096LPI5 108 aaPredicted RBP11.95□□□□□ -0.5
COPS7A-216ENST00000543170 Q6ZSA8 131 aa11.95□□□□□ -0.5
COPS7A-216ENST00000543170 TOMM6Q96B49 74 aa11.95□□□□□ -0.5
COPS7A-216ENST00000543170 OPRPNQ99935 248 aaPredicted RBP11.95□□□□□ -0.5
COPS7A-216ENST00000543170 IGHV1-58A0A0C4DH39 117 aa11.94□□□□□ -0.5
COPS7A-216ENST00000543170 IGIPA6NJ69 53 aa11.94□□□□□ -0.5
COPS7A-216ENST00000543170 IFITM10A6NMD0 228 aa11.94□□□□□ -0.5
COPS7A-216ENST00000543170 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
COPS7A-216ENST00000543170 AP5S1Q9NUS5 200 aa11.94□□□□□ -0.5
COPS7A-216ENST00000543170 Q6ZN92 141 aa11.93□□□□□ -0.5
COPS7A-216ENST00000543170 TEX43Q6ZNM6 134 aa11.93□□□□□ -0.5
COPS7A-216ENST00000543170 FA2HQ7L5A8 372 aa11.93□□□□□ -0.5
COPS7A-216ENST00000543170 C9orf163Q8N9P6 203 aa11.93□□□□□ -0.5
COPS7A-216ENST00000543170 C18orf32Q8TCD1 76 aa11.93□□□□□ -0.5
COPS7A-216ENST00000543170 COX7A2LO14548 114 aa11.92□□□□□ -0.5
COPS7A-216ENST00000543170 XGP55808 180 aa11.92□□□□□ -0.5
COPS7A-216ENST00000543170 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
COPS7A-216ENST00000543170 AMELXQ99217 191 aa11.92□□□□□ -0.5
COPS7A-216ENST00000543170 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
COPS7A-216ENST00000543170 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
COPS7A-216ENST00000543170 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
COPS7A-216ENST00000543170 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.5
COPS7A-216ENST00000543170 LINC00173Q6ZV60 143 aa11.9□□□□□ -0.5
COPS7A-216ENST00000543170 ERASQ7Z444 233 aa11.9□□□□□ -0.5
COPS7A-216ENST00000543170 IGHV3OR16-9A0A0B4J2B5 98 aa11.89□□□□□ -0.51
COPS7A-216ENST00000543170 SLPIP03973 132 aa11.89□□□□□ -0.51
COPS7A-216ENST00000543170 VCX2Q9H322 139 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms