RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 FAT2Q9NYQ8 4349 aa4.66□□□□□ -1.66
PAAF1-212ENST00000543079 DNAH2Q9P225 4427 aa4.65□□□□□ -1.66
PAAF1-212ENST00000543079 TRBV6-5A0A0K0K1A5 114 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 D6R8Y8 96 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 H7C1H1 209 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 HLA-DQA1P01909 254 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 INAFM2P0DMQ5 153 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 LYPD5Q6UWN5 251 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 Q75L30 129 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 DNAJC30Q96LL9 226 aa4.65□□□□□ -1.67
PAAF1-212ENST00000543079 DNAH17Q9UFH2 4485 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 IGHV3-38A0A0C4DH36 116 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 PHOX2AO14813 284 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 NPYP01303 97 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 APCSP02743 223 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 PPBPP02775 128 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 SRIP30626 198 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 CKS2P33552 79 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 POLR2KP53803 58 aaKnown RBP4.64□□□□□ -1.67
PAAF1-212ENST00000543079 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 COX19Q49B96 90 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 OR10J3Q5JRS4 329 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 NTM-AS1Q6ZSK4 140 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 NEGR1Q7Z3B1 354 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 SH2D6Q7Z4S9 175 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 ATP6V0E2Q8NHE4 81 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 TMEM70Q9BUB7 260 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 LINC00588Q9Y4M8 146 aa4.64□□□□□ -1.67
PAAF1-212ENST00000543079 SDHAF1A6NFY7 115 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 MT-ND6P03923 174 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 DAZ4Q86SG3 579 aaKnown RBP4.63□□□□□ -1.67
PAAF1-212ENST00000543079 ORMDL3Q8N138 153 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 PRELID3AQ96N28 172 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 C20orf78Q9BR46 151 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 ALKBH7Q9BT30 221 aaPredicted RBP4.63□□□□□ -1.67
PAAF1-212ENST00000543079 GTSF1LQ9H1H1 148 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 DAZ3Q9NR90 486 aaKnown RBP4.63□□□□□ -1.67
PAAF1-212ENST00000543079 TRAPPC1Q9Y5R8 145 aa4.63□□□□□ -1.67
PAAF1-212ENST00000543079 IGLV2-18A0A075B6J9 118 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 TRBV27A0A0K0K1C4 114 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 A4D1N5 150 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 PPP1R17O96001 155 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 TSHBP01222 138 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 RAB5AP20339 215 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 RPL32P62910 135 aaKnown RBP4.62□□□□□ -1.67
PAAF1-212ENST00000543079 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 ST20Q9HBF5 79 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 LAMTOR2Q9Y2Q5 125 aa4.62□□□□□ -1.67
PAAF1-212ENST00000543079 MRPS16Q9Y3D3 137 aaKnown RBP4.62□□□□□ -1.67
PAAF1-212ENST00000543079 PKD1P98161 4303 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 DNAH6Q9C0G6 4158 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 TRBV6-8A0A0A6YYG3 113 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 C16orf90A8MZG2 172 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 I3L3M4 83 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 M0R2N4 97 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 TRGC2P03986 189 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 CCL18P55774 89 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 LELP1Q5T871 98 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 UPK3BQ9BT76 320 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 SMIM2Q9BVW6 85 aa4.61□□□□□ -1.67
PAAF1-212ENST00000543079 LOC389332A0A1B0GUA5 103 aa4.6□□□□□ -1.67
PAAF1-212ENST00000543079 IQCJQ1A5X6 159 aa4.6□□□□□ -1.67
PAAF1-212ENST00000543079 WFDC10BQ8IUB3 73 aa4.6□□□□□ -1.67
PAAF1-212ENST00000543079 CHCHD7Q9BUK0 85 aa4.6□□□□□ -1.67
PAAF1-212ENST00000543079 LINC01546A6NGU7 62 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 ESDP10768 282 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 PMCHP20382 165 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 IFI27P40305 119 aaPredicted RBP4.59□□□□□ -1.67
PAAF1-212ENST00000543079 COTL1Q14019 142 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 TMEM97Q5BJF2 176 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 Q8N8P6 123 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 C18orf32Q8TCD1 76 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 MAP1LC3AQ9H492 121 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 Q9H8V8 135 aa4.59□□□□□ -1.67
PAAF1-212ENST00000543079 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.68
PAAF1-212ENST00000543079 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.68
PAAF1-212ENST00000543079 TRBV25-1A0A075B6N4 114 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 TRAV8-6A0A0B4J262 113 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 IGHV1-24A0A0C4DH33 117 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 TCAPO15273 167 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 DNAH10OSP0CZ25 163 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 NIT1Q86X76 327 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 UBE2DNLQ8IWF7 75 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.58□□□□□ -1.68
PAAF1-212ENST00000543079 KIR2DL4Q99706 377 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
PAAF1-212ENST00000543079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.57□□□□□ -1.68
PAAF1-212ENST00000543079 IGKV2-29A2NJV5 120 aaPredicted RBP4.57□□□□□ -1.68
PAAF1-212ENST00000543079 C5orf52A6NGY3 159 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 SIVA1O15304 175 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 FCER1GP30273 86 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 GAGE6Q13070 117 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 MPV17L2Q567V2 206 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 LINC01556Q5JQF7 62 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 Q6ZR54 194 aa4.57□□□□□ -1.68
PAAF1-212ENST00000543079 C20orf203Q8NBC4 194 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms