RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 CST9LP1Q5W188 147 aa5.45□□□□□ -1.54
C2CD3-219ENST00000542930 BAGE2Q86Y30 109 aa5.45□□□□□ -1.54
C2CD3-219ENST00000542930 OR2D3Q8NGH3 330 aa5.45□□□□□ -1.54
C2CD3-219ENST00000542930 IMMP2LQ96T52 175 aa5.45□□□□□ -1.54
C2CD3-219ENST00000542930 C1orf196B1AJZ1 125 aa5.44□□□□□ -1.54
C2CD3-219ENST00000542930 LINC00173Q6ZV60 143 aa5.44□□□□□ -1.54
C2CD3-219ENST00000542930 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
C2CD3-219ENST00000542930 GATD1Q8NB37 220 aa5.44□□□□□ -1.54
C2CD3-219ENST00000542930 CDC42SE2Q9NRR3 84 aa5.44□□□□□ -1.54
C2CD3-219ENST00000542930 MRPL35Q9NZE8 188 aaKnown RBP5.44□□□□□ -1.54
C2CD3-219ENST00000542930 F2Z2F3 143 aa5.43□□□□□ -1.54
C2CD3-219ENST00000542930 G3V3Q6 166 aa5.43□□□□□ -1.54
C2CD3-219ENST00000542930 M0QXV9 152 aa5.43□□□□□ -1.54
C2CD3-219ENST00000542930 TLX1NBP0CAT3 122 aa5.43□□□□□ -1.54
C2CD3-219ENST00000542930 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
C2CD3-219ENST00000542930 RPS20P60866 119 aaKnown RBP5.42□□□□□ -1.54
C2CD3-219ENST00000542930 SPAG11BQ08648 103 aa5.42□□□□□ -1.54
C2CD3-219ENST00000542930 RPL7L1Q6DKI1 246 aaKnown RBP5.42□□□□□ -1.54
C2CD3-219ENST00000542930 MRPL52Q86TS9 123 aaKnown RBP5.42□□□□□ -1.54
C2CD3-219ENST00000542930 KRTAP4-1Q9BYQ7 146 aa5.42□□□□□ -1.54
C2CD3-219ENST00000542930 PPDPFQ9H3Y8 114 aa5.42□□□□□ -1.54
C2CD3-219ENST00000542930 MAP1LC3B2A6NCE7 125 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 SDHAF1A6NFY7 115 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
C2CD3-219ENST00000542930 F8WDY8 70 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 CTAG1AP78358 180 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 OR10D4PQ8NGN7 298 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 RPL39LQ96EH5 51 aaKnown RBP5.41□□□□□ -1.54
C2CD3-219ENST00000542930 MAP1LC3BQ9GZQ8 125 aa5.41□□□□□ -1.54
C2CD3-219ENST00000542930 SCO2A0A1W2PP80 73 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 I3L3M4 83 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 NUPR1O60356 82 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 PAGE4O60829 102 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 TSHBP01222 138 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 GIPP09681 153 aaPredicted RBP5.4□□□□□ -1.54
C2CD3-219ENST00000542930 CFC1BP0CG36 223 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 TMEM241Q24JQ0 296 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 GAGE2EQ4V326 116 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 AKR1C8PQ5T2L2 129 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 LYZL1Q6UWQ5 148 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 C5orf38Q86SI9 138 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 MRAP2Q96G30 205 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 SMDT1Q9H4I9 107 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 BATF3Q9NR55 127 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 GAGE2DQ9UEU5 116 aa5.4□□□□□ -1.54
C2CD3-219ENST00000542930 FXYD6-FXYD2A0A087WZ82 144 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 XKRY2A2RUG3 117 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 NDUFA1O15239 70 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 PMCHP20382 165 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 KRTAP13-2Q52LG2 175 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 TMUB2Q71RG4 321 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 FAM210AQ96ND0 272 aa5.39□□□□□ -1.55
C2CD3-219ENST00000542930 TWIST1Q15672 202 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 C10orf25Q5T742 122 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 TEX261Q6UWH6 196 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 C9orf62Q8N4C0 152 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 LINC00337Q8N6G1 96 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 CTDSP1Q9GZU7 261 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 CYTL1Q9NRR1 136 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 ANAPC11Q9NYG5 84 aa5.38□□□□□ -1.55
C2CD3-219ENST00000542930 BORCS7-ASMTA0A0B4J1R7 106 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 TRAV13-1A0A0B4J241 112 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 TRBV6-5A0A0K0K1A5 114 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 SMLR1H3BR10 107 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 IFNA1P01562 189 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 RPL35P42766 123 aaKnown RBP5.37□□□□□ -1.55
C2CD3-219ENST00000542930 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
C2CD3-219ENST00000542930 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
C2CD3-219ENST00000542930 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 CNFNQ9BYD5 112 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
C2CD3-219ENST00000542930 CSDC2Q9Y534 153 aaKnown RBP5.37□□□□□ -1.55
C2CD3-219ENST00000542930 C7orf77A4D0Y5 90 aa5.36□□□□□ -1.55
C2CD3-219ENST00000542930 PFDN1O60925 122 aa5.36□□□□□ -1.55
C2CD3-219ENST00000542930 CTRLP40313 264 aa5.36□□□□□ -1.55
C2CD3-219ENST00000542930 C9orf129Q5T035 196 aaKnown RBP5.36□□□□□ -1.55
C2CD3-219ENST00000542930 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
C2CD3-219ENST00000542930 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
C2CD3-219ENST00000542930 TMEM242Q9NWH2 141 aa5.36□□□□□ -1.55
C2CD3-219ENST00000542930 ARPC5O15511 151 aa5.35□□□□□ -1.55
C2CD3-219ENST00000542930 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
C2CD3-219ENST00000542930 MT1HP80294 61 aa5.35□□□□□ -1.55
C2CD3-219ENST00000542930 FAM229BQ4G0N7 80 aa5.35□□□□□ -1.55
C2CD3-219ENST00000542930 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
C2CD3-219ENST00000542930 KRTAP13-3Q3SY46 172 aa5.34□□□□□ -1.55
C2CD3-219ENST00000542930 RNASE13Q5GAN3 156 aaKnown RBP5.34□□□□□ -1.55
C2CD3-219ENST00000542930 FP248Q71RG6 208 aaPredicted RBP5.34□□□□□ -1.55
C2CD3-219ENST00000542930 SMIM15Q7Z3B0 74 aa5.34□□□□□ -1.55
C2CD3-219ENST00000542930 RNASE7Q9H1E1 156 aaKnown RBP5.34□□□□□ -1.55
C2CD3-219ENST00000542930 C22orf24Q9Y442 160 aa5.34□□□□□ -1.55
C2CD3-219ENST00000542930 BCE1O60756 84 aa5.33□□□□□ -1.56
C2CD3-219ENST00000542930 FOXA3P55318 350 aaPredicted RBP5.33□□□□□ -1.56
C2CD3-219ENST00000542930 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
C2CD3-219ENST00000542930 RGS21Q2M5E4 152 aa5.33□□□□□ -1.56
C2CD3-219ENST00000542930 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
C2CD3-219ENST00000542930 CENPWQ5EE01 88 aa5.33□□□□□ -1.56
C2CD3-219ENST00000542930 ST20Q9HBF5 79 aa5.33□□□□□ -1.56
C2CD3-219ENST00000542930 UBE2D4Q9Y2X8 147 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms