RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
SCNN1A-217ENST00000542260 CTRLP40313 264 aa9.84□□□□□ -0.83
SCNN1A-217ENST00000542260 FOXA3P55318 350 aaPredicted RBP9.84□□□□□ -0.83
SCNN1A-217ENST00000542260 TWIST1Q15672 202 aa9.84□□□□□ -0.83
SCNN1A-217ENST00000542260 NUP35Q8NFH5 326 aa9.84□□□□□ -0.83
SCNN1A-217ENST00000542260 SPACA4Q8TDM5 124 aa9.83□□□□□ -0.84
SCNN1A-217ENST00000542260 GTSF1Q8WW33 167 aa9.83□□□□□ -0.84
SCNN1A-217ENST00000542260 A0A087WYN8 130 aa9.82□□□□□ -0.84
SCNN1A-217ENST00000542260 RIGQ13278 110 aa9.82□□□□□ -0.84
SCNN1A-217ENST00000542260 AMMECR1LQ6DCA0 310 aa9.82□□□□□ -0.84
SCNN1A-217ENST00000542260 SMIM15Q7Z3B0 74 aa9.82□□□□□ -0.84
SCNN1A-217ENST00000542260 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
SCNN1A-217ENST00000542260 CNFNQ9BYD5 112 aa9.82□□□□□ -0.84
SCNN1A-217ENST00000542260 TRBV24-1A0A075B6N3 115 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 IGKV3OR2-268A0A0C4DH90 116 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 A0A1B0GUT8 65 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 NCR2O95944 276 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 ATP5L2Q7Z4Y8 100 aa9.81□□□□□ -0.84
SCNN1A-217ENST00000542260 TGIF2-C20orf24A0A0A6YYL0 155 aa9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 H7C423 109 aa9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 SLPIP03973 132 aa9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 S100A8P05109 93 aa9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 RPS10P46783 165 aaKnown RBP9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 COX19Q49B96 90 aa9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 MRPL54Q6P161 138 aaKnown RBP9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
SCNN1A-217ENST00000542260 A0A1B0GW15 77 aa9.79□□□□□ -0.84
SCNN1A-217ENST00000542260 APCSP02743 223 aa9.79□□□□□ -0.84
SCNN1A-217ENST00000542260 GATD1Q8NB37 220 aa9.79□□□□□ -0.84
SCNN1A-217ENST00000542260 YPEL4Q96NS1 127 aa9.79□□□□□ -0.84
SCNN1A-217ENST00000542260 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
SCNN1A-217ENST00000542260 TRAV26-2A0A0B4J265 109 aa9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 COLCA2A8K830 154 aa9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 HBBP68871 147 aa9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 CHCHD10Q8WYQ3 142 aaPredicted RBP9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 UBR4Q5T4S7 5183 aa9.78□□□□□ -0.84
SCNN1A-217ENST00000542260 PHOX2AO14813 284 aa9.77□□□□□ -0.85
SCNN1A-217ENST00000542260 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
SCNN1A-217ENST00000542260 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
SCNN1A-217ENST00000542260 CAMPP49913 170 aa9.77□□□□□ -0.85
SCNN1A-217ENST00000542260 COX6A2Q02221 97 aa9.77□□□□□ -0.85
SCNN1A-217ENST00000542260 HIGD2BQ4VC39 106 aa9.77□□□□□ -0.85
SCNN1A-217ENST00000542260 RPL39LQ96EH5 51 aaKnown RBP9.76□□□□□ -0.85
SCNN1A-217ENST00000542260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 GVQW2A0A096LPI5 108 aaPredicted RBP9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 A0A1B0GXF2 115 aa9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 IGKV2-29A2NJV5 120 aaPredicted RBP9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 SDHAF1A6NFY7 115 aa9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 FGF6P10767 208 aa9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 RAB5AP20339 215 aa9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 TMEM101Q96IK0 257 aa9.75□□□□□ -0.85
SCNN1A-217ENST00000542260 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
SCNN1A-217ENST00000542260 MT-ND6P03923 174 aa9.74□□□□□ -0.85
SCNN1A-217ENST00000542260 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
SCNN1A-217ENST00000542260 GNB1LQ9BYB4 327 aa9.74□□□□□ -0.85
SCNN1A-217ENST00000542260 LINC00474Q9P2X8 69 aa9.74□□□□□ -0.85
SCNN1A-217ENST00000542260 I3L3M4 83 aa9.73□□□□□ -0.85
SCNN1A-217ENST00000542260 PMCHP20382 165 aa9.73□□□□□ -0.85
SCNN1A-217ENST00000542260 STPG4Q8N801 248 aa9.73□□□□□ -0.85
SCNN1A-217ENST00000542260 PRSS3P2Q8NHM4 247 aa9.73□□□□□ -0.85
SCNN1A-217ENST00000542260 TRAPPC1Q9Y5R8 145 aa9.73□□□□□ -0.85
SCNN1A-217ENST00000542260 FOXI1Q12951 378 aa9.72□□□□□ -0.85
SCNN1A-217ENST00000542260 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
SCNN1A-217ENST00000542260 MRAP2Q96G30 205 aa9.72□□□□□ -0.85
SCNN1A-217ENST00000542260 TMEM191AQ9H0A3 160 aa9.72□□□□□ -0.85
SCNN1A-217ENST00000542260 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.86
SCNN1A-217ENST00000542260 XCL1P47992 114 aa9.71□□□□□ -0.86
SCNN1A-217ENST00000542260 PRR3P79522 188 aaKnown RBP9.71□□□□□ -0.86
SCNN1A-217ENST00000542260 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.86
SCNN1A-217ENST00000542260 IGHV1-58A0A0C4DH39 117 aa9.7□□□□□ -0.86
SCNN1A-217ENST00000542260 FABP9Q0Z7S8 132 aa9.7□□□□□ -0.86
SCNN1A-217ENST00000542260 ST20Q9HBF5 79 aa9.7□□□□□ -0.86
SCNN1A-217ENST00000542260 A0A096LNI7 61 aa9.69□□□□□ -0.86
SCNN1A-217ENST00000542260 LINC00959A0A1B0GUT2 108 aa9.69□□□□□ -0.86
SCNN1A-217ENST00000542260 CCL25O15444 150 aa9.69□□□□□ -0.86
SCNN1A-217ENST00000542260 SS18Q15532 418 aa9.69□□□□□ -0.86
SCNN1A-217ENST00000542260 CARD19Q96LW7 228 aa9.69□□□□□ -0.86
SCNN1A-217ENST00000542260 TNXBP22105 4242 aa9.69□□□□□ -0.86
SCNN1A-217ENST00000542260 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
SCNN1A-217ENST00000542260 ZNF561-AS1K7EIQ3 104 aa9.68□□□□□ -0.86
SCNN1A-217ENST00000542260 TRGC2P03986 189 aa9.68□□□□□ -0.86
SCNN1A-217ENST00000542260 ESDP10768 282 aa9.68□□□□□ -0.86
SCNN1A-217ENST00000542260 FAM104BQ5XKR9 115 aa9.68□□□□□ -0.86
SCNN1A-217ENST00000542260 AMN1Q8IY45 258 aa9.67□□□□□ -0.86
SCNN1A-217ENST00000542260 LINC01600Q96MT4 127 aa9.67□□□□□ -0.86
SCNN1A-217ENST00000542260 TSHBP01222 138 aa9.66□□□□□ -0.86
SCNN1A-217ENST00000542260 RAB4AP20338 218 aa9.66□□□□□ -0.86
SCNN1A-217ENST00000542260 SMAGPQ0VAQ4 97 aa9.66□□□□□ -0.86
SCNN1A-217ENST00000542260 CD164L2Q6UWJ8 174 aa9.66□□□□□ -0.86
SCNN1A-217ENST00000542260 MRPL52Q86TS9 123 aaKnown RBP9.66□□□□□ -0.86
SCNN1A-217ENST00000542260 TRBV27A0A0K0K1C4 114 aa9.65□□□□□ -0.86
SCNN1A-217ENST00000542260 CKS2P33552 79 aa9.65□□□□□ -0.86
SCNN1A-217ENST00000542260 RAB5BP61020 215 aa9.65□□□□□ -0.86
SCNN1A-217ENST00000542260 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
SCNN1A-217ENST00000542260 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms