RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 C6orf223Q8N319 242 aa14.12□□□□□ -0.15
MSRB3-211ENST00000541897 TOMM6Q96B49 74 aa14.12□□□□□ -0.15
MSRB3-211ENST00000541897 MRPS36P82909 103 aaKnown RBP14.11□□□□□ -0.15
MSRB3-211ENST00000541897 DGAT2L7PQ6IED9 249 aa14.11□□□□□ -0.15
MSRB3-211ENST00000541897 CDC42SE2Q9NRR3 84 aa14.11□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BKO60814 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BJP06899 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BOP23527 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BBP33778 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BDP58876 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BCP62807 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 MIAQ16674 131 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST2H2BEQ16778 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.1□□□□□ -0.15
MSRB3-211ENST00000541897 C1orf134Q5TEV5 83 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 ENHOQ6UWT2 76 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 BAGE3Q86Y29 109 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 LINC00269Q8N2A0 174 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BHQ93079 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BNQ99877 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 HIST1H2BMQ99879 126 aa14.1□□□□□ -0.15
MSRB3-211ENST00000541897 CRPP02741 224 aa14.09□□□□□ -0.15
MSRB3-211ENST00000541897 REG3AQ06141 175 aa14.09□□□□□ -0.15
MSRB3-211ENST00000541897 ZNF664Q8N3J9 261 aa14.09□□□□□ -0.15
MSRB3-211ENST00000541897 KIAA1109Q2LD37 5005 aa14.08□□□□□ -0.16
MSRB3-211ENST00000541897 C1orf196B1AJZ1 125 aa14.08□□□□□ -0.16
MSRB3-211ENST00000541897 UBE2WQ96B02 151 aa14.08□□□□□ -0.16
MSRB3-211ENST00000541897 IGIPA6NJ69 53 aa14.07□□□□□ -0.16
MSRB3-211ENST00000541897 RMI2Q96E14 147 aa14.07□□□□□ -0.16
MSRB3-211ENST00000541897 TIMM17AQ99595 171 aa14.07□□□□□ -0.16
MSRB3-211ENST00000541897 COX11Q9Y6N1 276 aa14.07□□□□□ -0.16
MSRB3-211ENST00000541897 A0A096LNJ9 63 aa14.06□□□□□ -0.16
MSRB3-211ENST00000541897 TRAV8-4A0A0B4J246 113 aa14.06□□□□□ -0.16
MSRB3-211ENST00000541897 ERASQ7Z444 233 aa14.06□□□□□ -0.16
MSRB3-211ENST00000541897 FAM104AQ969W3 186 aa14.06□□□□□ -0.16
MSRB3-211ENST00000541897 HBDP02042 147 aa14.05□□□□□ -0.16
MSRB3-211ENST00000541897 Q6ZRN7 208 aaPredicted RBP14.05□□□□□ -0.16
MSRB3-211ENST00000541897 TM2D2Q9BX73 214 aa14.05□□□□□ -0.16
MSRB3-211ENST00000541897 IGLV4-3A0A075B6K6 122 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 CCL25O15444 150 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 HSBP1O75506 76 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 LINC00310P59036 64 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 PAPPA-AS1Q5QFB9 102 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 Q6ZUT4 128 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 TMEM141Q96I45 108 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 Q9HAA7 133 aa14.04□□□□□ -0.16
MSRB3-211ENST00000541897 PCLOQ9Y6V0 5065 aa14.03□□□□□ -0.16
MSRB3-211ENST00000541897 SERF1AO75920 110 aa14.03□□□□□ -0.16
MSRB3-211ENST00000541897 DNAH17Q9UFH2 4485 aa14.02□□□□□ -0.16
MSRB3-211ENST00000541897 PDZD11Q5EBL8 140 aa14.02□□□□□ -0.17
MSRB3-211ENST00000541897 CLPSL2Q6UWE3 100 aa14.02□□□□□ -0.17
MSRB3-211ENST00000541897 SCGB3A1Q96QR1 104 aa14.02□□□□□ -0.17
MSRB3-211ENST00000541897 C1orf43Q9BWL3 253 aa14.02□□□□□ -0.17
MSRB3-211ENST00000541897 DNAH2Q9P225 4427 aa14.01□□□□□ -0.17
MSRB3-211ENST00000541897 RTL8CO15255 209 aa14.01□□□□□ -0.17
MSRB3-211ENST00000541897 COA6Q5JTJ3 125 aaKnown RBP14.01□□□□□ -0.17
MSRB3-211ENST00000541897 Q6ZN92 141 aa14.01□□□□□ -0.17
MSRB3-211ENST00000541897 FAT2Q9NYQ8 4349 aa14.01□□□□□ -0.17
MSRB3-211ENST00000541897 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
MSRB3-211ENST00000541897 LINC00336Q6ZUF6 198 aa14□□□□□ -0.17
MSRB3-211ENST00000541897 AMELXQ99217 191 aa14□□□□□ -0.17
MSRB3-211ENST00000541897 OPRPNQ99935 248 aaPredicted RBP14□□□□□ -0.17
MSRB3-211ENST00000541897 IGKV2D-24A0A075B6R9 120 aa13.99□□□□□ -0.17
MSRB3-211ENST00000541897 PMCHL1Q16048 86 aa13.99□□□□□ -0.17
MSRB3-211ENST00000541897 TEX43Q6ZNM6 134 aa13.99□□□□□ -0.17
MSRB3-211ENST00000541897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.98□□□□□ -0.17
MSRB3-211ENST00000541897 SS18Q15532 418 aa13.98□□□□□ -0.17
MSRB3-211ENST00000541897 RNASE13Q5GAN3 156 aaKnown RBP13.98□□□□□ -0.17
MSRB3-211ENST00000541897 KRTAP26-1Q6PEX3 210 aa13.98□□□□□ -0.17
MSRB3-211ENST00000541897 VCX2Q9H322 139 aa13.98□□□□□ -0.17
MSRB3-211ENST00000541897 ATP5LO75964 103 aa13.97□□□□□ -0.17
MSRB3-211ENST00000541897 IGKV3OR2-268A0A0C4DH90 116 aa13.96□□□□□ -0.17
MSRB3-211ENST00000541897 IFITM10A6NMD0 228 aa13.96□□□□□ -0.17
MSRB3-211ENST00000541897 PSCAO43653 123 aa13.96□□□□□ -0.17
MSRB3-211ENST00000541897 NUPR1O60356 82 aa13.96□□□□□ -0.17
MSRB3-211ENST00000541897 LINC00173Q6ZV60 143 aa13.96□□□□□ -0.17
MSRB3-211ENST00000541897 C2orf88Q9BSF0 95 aa13.96□□□□□ -0.17
MSRB3-211ENST00000541897 PKHD1P08F94 4074 aa13.95□□□□□ -0.18
MSRB3-211ENST00000541897 FAM19A2Q8N3H0 131 aa13.95□□□□□ -0.18
MSRB3-211ENST00000541897 CHCHD10Q8WYQ3 142 aaPredicted RBP13.95□□□□□ -0.18
MSRB3-211ENST00000541897 IGLV10-54A0A075B6I4 117 aa13.94□□□□□ -0.18
MSRB3-211ENST00000541897 TRAV13-1A0A0B4J241 112 aa13.93□□□□□ -0.18
MSRB3-211ENST00000541897 UBE2D1P51668 147 aa13.93□□□□□ -0.18
MSRB3-211ENST00000541897 NDUFA6P56556 154 aa13.93□□□□□ -0.18
MSRB3-211ENST00000541897 CD164L2Q6UWJ8 174 aa13.93□□□□□ -0.18
MSRB3-211ENST00000541897 FAM19A3Q7Z5A8 133 aa13.93□□□□□ -0.18
MSRB3-211ENST00000541897 BAALCQ8WXS3 180 aa13.93□□□□□ -0.18
MSRB3-211ENST00000541897 A0A1B0GVY2 172 aa13.92□□□□□ -0.18
MSRB3-211ENST00000541897 PMVKQ15126 192 aa13.92□□□□□ -0.18
MSRB3-211ENST00000541897 MAPKAPK5-AS1Q8N8E1 139 aa13.92□□□□□ -0.18
MSRB3-211ENST00000541897 PACRGQ96M98 296 aaPredicted RBP13.92□□□□□ -0.18
MSRB3-211ENST00000541897 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
MSRB3-211ENST00000541897 CST9LQ9H4G1 147 aa13.91□□□□□ -0.18
MSRB3-211ENST00000541897 LRCOL1A6NCL2 159 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 GAGE12HA6NDE8 117 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 PRSS29PA6NIE9 313 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 XCL1P47992 114 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 SEC11AP67812 179 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 FOXI1Q12951 378 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 IFI27L1Q96BM0 104 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms