RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 C4orf3Q8WVX3 66 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 DNAJC30Q96LL9 226 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 HIST1H4GQ99525 98 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 SIGMAR1Q99720 223 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 JPT2Q9H910 190 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 TP53TG1Q9Y2A0 90 aa4.88□□□□□ -1.63
EPHA4-214ENST00000541600 CSMD3Q7Z407 3707 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 IGKV3-7A0A075B6H7 116 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 TRAV26-1A0A087WT03 109 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 A0A0J9YY99 117 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 M0R2P5 195 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 LEPROTO15243 131 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 AZU1P20160 251 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 CMC4P56277 68 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-214ENST00000541600 AMELXQ99217 191 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 YAE1D1Q9NRH1 226 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 NHP2Q9NX24 153 aaKnown RBP4.87□□□□□ -1.63
EPHA4-214ENST00000541600 LYSTQ99698 3801 aa4.87□□□□□ -1.63
EPHA4-214ENST00000541600 TENM3Q9P273 2699 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 TMEM223A0PJW6 202 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 ZNF815PA8K554 130 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 PROK1P58294 105 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 CKS1BP61024 79 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 DEFB114Q30KQ6 69 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 RAB37Q96AX2 223 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 LINC01600Q96MT4 127 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
EPHA4-214ENST00000541600 RBMY1BA6NDE4 496 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RBMY1EA6NEQ0 496 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 M0QXV9 152 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RS1O15537 224 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 GAGE7O76087 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 IGHV3-53P01767 116 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 IGHV3-30P01768 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RBMY1DP0C7P1 496 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 GAGE12FP0CL80 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 GAGE12GP0CL81 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 GAGE12IP0CL82 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RBMY1A1P0DJD3 496 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RBMY1CP0DJD4 496 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 IGHV3-30-5P0DP03 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 TCTAP57738 103 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 UBE2D3P61077 147 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 UBE2D2P62837 147 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RPL39P62891 51 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 ZNF415Q09FC8 603 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 GAGE4Q13068 117 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 RBMY1FQ15415 496 aaKnown RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-214ENST00000541600 ZNRF2Q8NHG8 242 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 SPANXA1Q9NS26 97 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 PRO0461Q9UI25 63 aa4.85□□□□□ -1.63
EPHA4-214ENST00000541600 IGLV4-3A0A075B6K6 122 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 TRAV12-2A0A075B6T6 113 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 J3QQQ9 107 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 DEFB131AP59861 70 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 ZNF56Q15929 161 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 LYRM7Q5U5X0 104 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 FAM19A3Q7Z5A8 133 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 SBSPONQ8IVN8 264 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 C11orf72Q8NBR9 251 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 ATP6V0E2Q8NHE4 81 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 FAM104AQ969W3 186 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 DUX5Q96PT3 197 aa4.84□□□□□ -1.63
EPHA4-214ENST00000541600 TRBV20-1A0A075B6N2 111 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 K7ERJ3 54 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 ZNF22P17026 224 aaPredicted RBP4.83□□□□□ -1.64
EPHA4-214ENST00000541600 SRSF9Q13242 221 aaKnown RBP eCLIP4.83□□□□□ -1.64
EPHA4-214ENST00000541600 C10orf25Q5T742 122 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 CD164L2Q6UWJ8 174 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 NDUFA11Q86Y39 141 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 STHQ8IWL8 128 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 TMEM61Q8N0U2 210 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 KLHL30-AS1Q8NEE0 82 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
EPHA4-214ENST00000541600 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
EPHA4-214ENST00000541600 NACAE9PAV3 2078 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 IGLV5-45A0A087WSX0 123 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 A0A0B4J2C4 111 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 A0A0J9YXY3 114 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 TRBV10-1A0A0K0K1A3 114 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 TINCRA0A1B0GVN0 87 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 KNCNA6PVL3 124 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 J3QR89 54 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 TIMM17BO60830 172 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 INSP01308 110 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 IGHV4-30-4P0DP06 118 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
EPHA4-214ENST00000541600 TSPEAR-AS2P59090 65 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 ODF3L2Q3SX64 289 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 TMEM170BQ5T4T1 132 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
EPHA4-214ENST00000541600 CFAP126Q5VTH2 177 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms