RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 IGLV4-69A0A075B6H9 119 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 TRAV1-1A0A0B4J248 108 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 NUDT10Q8NFP7 164 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 DIRC1Q969H9 104 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 NUDT11Q96G61 164 aa7.53□□□□□ -1.2
SNHG1-216ENST00000541416 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
SNHG1-216ENST00000541416 HMSDA8MTL9 139 aa7.52□□□□□ -1.21
SNHG1-216ENST00000541416 C1orf196B1AJZ1 125 aa7.52□□□□□ -1.21
SNHG1-216ENST00000541416 COX7A2LO14548 114 aa7.52□□□□□ -1.21
SNHG1-216ENST00000541416 APOMO95445 188 aa7.52□□□□□ -1.21
SNHG1-216ENST00000541416 C1orf137Q5JT78 98 aa7.52□□□□□ -1.21
SNHG1-216ENST00000541416 CAMK2N2Q96S95 79 aa7.52□□□□□ -1.21
SNHG1-216ENST00000541416 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
SNHG1-216ENST00000541416 MRPL52Q86TS9 123 aaKnown RBP7.51□□□□□ -1.21
SNHG1-216ENST00000541416 BORCS7Q96B45 105 aa7.51□□□□□ -1.21
SNHG1-216ENST00000541416 ST20Q9HBF5 79 aa7.51□□□□□ -1.21
SNHG1-216ENST00000541416 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
SNHG1-216ENST00000541416 TRBV20OR9-2A0A075B6H5 130 aa7.5□□□□□ -1.21
SNHG1-216ENST00000541416 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
SNHG1-216ENST00000541416 ESDP10768 282 aa7.5□□□□□ -1.21
SNHG1-216ENST00000541416 RPL18AQ02543 176 aaKnown RBP7.5□□□□□ -1.21
SNHG1-216ENST00000541416 C9orf116Q5BN46 136 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-216ENST00000541416 C2orf48Q96LS8 159 aa7.5□□□□□ -1.21
SNHG1-216ENST00000541416 A0A1W2PNN7 141 aa7.49□□□□□ -1.21
SNHG1-216ENST00000541416 C7orf77A4D0Y5 90 aa7.49□□□□□ -1.21
SNHG1-216ENST00000541416 BCL2P10415 239 aa7.49□□□□□ -1.21
SNHG1-216ENST00000541416 TAGLN2P37802 199 aaKnown RBP7.49□□□□□ -1.21
SNHG1-216ENST00000541416 NUP35Q8NFH5 326 aa7.49□□□□□ -1.21
SNHG1-216ENST00000541416 BATF3Q9NR55 127 aa7.49□□□□□ -1.21
SNHG1-216ENST00000541416 TSHBP01222 138 aa7.48□□□□□ -1.21
SNHG1-216ENST00000541416 RGS21Q2M5E4 152 aa7.48□□□□□ -1.21
SNHG1-216ENST00000541416 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
SNHG1-216ENST00000541416 RNASE7Q9H1E1 156 aaKnown RBP7.48□□□□□ -1.21
SNHG1-216ENST00000541416 TMEM242Q9NWH2 141 aa7.48□□□□□ -1.21
SNHG1-216ENST00000541416 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
SNHG1-216ENST00000541416 A8MWL6 223 aa7.47□□□□□ -1.21
SNHG1-216ENST00000541416 IGLV7-43P04211 117 aa7.47□□□□□ -1.21
SNHG1-216ENST00000541416 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
SNHG1-216ENST00000541416 MUC2Q02817 5179 aa7.47□□□□□ -1.21
SNHG1-216ENST00000541416 A0A087WZ39 114 aa7.46□□□□□ -1.22
SNHG1-216ENST00000541416 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
SNHG1-216ENST00000541416 H0Y9J4 135 aa7.46□□□□□ -1.22
SNHG1-216ENST00000541416 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-216ENST00000541416 FCER1GP30273 86 aa7.46□□□□□ -1.22
SNHG1-216ENST00000541416 UBE2D1P51668 147 aa7.46□□□□□ -1.22
SNHG1-216ENST00000541416 FOXA3P55318 350 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-216ENST00000541416 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
SNHG1-216ENST00000541416 IMMP2LQ96T52 175 aa7.46□□□□□ -1.22
SNHG1-216ENST00000541416 CSDC2Q9Y534 153 aaKnown RBP7.46□□□□□ -1.22
SNHG1-216ENST00000541416 F8WDY8 70 aa7.45□□□□□ -1.22
SNHG1-216ENST00000541416 GATCO43716 136 aaKnown RBP7.45□□□□□ -1.22
SNHG1-216ENST00000541416 PPP1R17O96001 155 aa7.45□□□□□ -1.22
SNHG1-216ENST00000541416 RPL13AP40429 203 aaKnown RBP7.45□□□□□ -1.22
SNHG1-216ENST00000541416 SPAG11BQ08648 103 aa7.45□□□□□ -1.22
SNHG1-216ENST00000541416 PRR4Q16378 134 aa7.45□□□□□ -1.22
SNHG1-216ENST00000541416 OR10D4PQ8NGN7 298 aa7.45□□□□□ -1.22
SNHG1-216ENST00000541416 OCC1Q8TAD7 63 aa7.45□□□□□ -1.22
SNHG1-216ENST00000541416 TRAV13-1A0A0B4J241 112 aa7.44□□□□□ -1.22
SNHG1-216ENST00000541416 K7EN84 100 aa7.44□□□□□ -1.22
SNHG1-216ENST00000541416 VCYO14598 125 aa7.44□□□□□ -1.22
SNHG1-216ENST00000541416 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
SNHG1-216ENST00000541416 TMEM18Q96B42 140 aa7.44□□□□□ -1.22
SNHG1-216ENST00000541416 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
SNHG1-216ENST00000541416 CT83Q5H943 113 aa7.43□□□□□ -1.22
SNHG1-216ENST00000541416 C5orf38Q86SI9 138 aa7.43□□□□□ -1.22
SNHG1-216ENST00000541416 OPRPNQ99935 248 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-216ENST00000541416 TMEM191AQ9H0A3 160 aa7.43□□□□□ -1.22
SNHG1-216ENST00000541416 MRPL35Q9NZE8 188 aaKnown RBP7.43□□□□□ -1.22
SNHG1-216ENST00000541416 A0A1B0GUT8 65 aa7.42□□□□□ -1.22
SNHG1-216ENST00000541416 NDUFA1O15239 70 aa7.42□□□□□ -1.22
SNHG1-216ENST00000541416 TMEM241Q24JQ0 296 aa7.42□□□□□ -1.22
SNHG1-216ENST00000541416 FAM231DQ6ZW35 169 aa7.42□□□□□ -1.22
SNHG1-216ENST00000541416 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
SNHG1-216ENST00000541416 TMEM250H0YL14 139 aa7.4□□□□□ -1.22
SNHG1-216ENST00000541416 PPP1R2P9O14990 202 aa7.4□□□□□ -1.22
SNHG1-216ENST00000541416 UBE2BP63146 152 aa7.4□□□□□ -1.22
SNHG1-216ENST00000541416 RNASE13Q5GAN3 156 aaKnown RBP7.4□□□□□ -1.22
SNHG1-216ENST00000541416 ORAOV1Q8WV07 137 aa7.4□□□□□ -1.22
SNHG1-216ENST00000541416 TIMM21Q9BVV7 248 aa7.4□□□□□ -1.22
SNHG1-216ENST00000541416 HIGD1CA8MV81 97 aa7.39□□□□□ -1.23
SNHG1-216ENST00000541416 TCAPO15273 167 aa7.39□□□□□ -1.23
SNHG1-216ENST00000541416 TLX1NBP0CAT3 122 aa7.39□□□□□ -1.23
SNHG1-216ENST00000541416 RAB4AP20338 218 aa7.39□□□□□ -1.23
SNHG1-216ENST00000541416 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
SNHG1-216ENST00000541416 FAM19A5Q7Z5A7 132 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-216ENST00000541416 KRTAP9-2Q9BYQ4 174 aa7.39□□□□□ -1.23
SNHG1-216ENST00000541416 AMN1Q8IY45 258 aa7.38□□□□□ -1.23
SNHG1-216ENST00000541416 CARHSP1Q9Y2V2 147 aaKnown RBP7.38□□□□□ -1.23
SNHG1-216ENST00000541416 M0QXV9 152 aa7.37□□□□□ -1.23
SNHG1-216ENST00000541416 RIGQ13278 110 aa7.37□□□□□ -1.23
SNHG1-216ENST00000541416 Q6ZUT4 128 aa7.37□□□□□ -1.23
SNHG1-216ENST00000541416 FAM168BA1KXE4 195 aa7.36□□□□□ -1.23
SNHG1-216ENST00000541416 KRTAP1-4P0C5Y4 121 aa7.36□□□□□ -1.23
SNHG1-216ENST00000541416 CEBPGP53567 150 aa7.36□□□□□ -1.23
SNHG1-216ENST00000541416 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
SNHG1-216ENST00000541416 SLC51BQ86UW2 128 aa7.36□□□□□ -1.23
SNHG1-216ENST00000541416 SMDT1Q9H4I9 107 aa7.36□□□□□ -1.23
SNHG1-216ENST00000541416 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms