RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 H7C423 109 aa7.02□□□□□ -1.29
COPA-205ENST00000541366 PFDN1O60925 122 aa7.02□□□□□ -1.29
COPA-205ENST00000541366 NCR2O95944 276 aa7.02□□□□□ -1.29
COPA-205ENST00000541366 ZNF25P17030 456 aaPredicted RBP7.02□□□□□ -1.29
COPA-205ENST00000541366 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
COPA-205ENST00000541366 RPS20P60866 119 aaKnown RBP7.02□□□□□ -1.29
COPA-205ENST00000541366 SS18Q15532 418 aa7.02□□□□□ -1.29
COPA-205ENST00000541366 ISOC2Q96AB3 205 aa7.02□□□□□ -1.29
COPA-205ENST00000541366 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
COPA-205ENST00000541366 TRAV1-1A0A0B4J248 108 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 SDHAF1A6NFY7 115 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 F2Z2F3 143 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 BCL2L11O43521 198 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 IFNA1P01562 189 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 TWIST1Q15672 202 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 BTF3L4Q96K17 158 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 NDUFA13Q9P0J0 144 aa7.01□□□□□ -1.29
COPA-205ENST00000541366 RAB19A4D1S5 217 aa7□□□□□ -1.29
COPA-205ENST00000541366 MALP21145 153 aa7□□□□□ -1.29
COPA-205ENST00000541366 KCNRGQ8N5I3 272 aa7□□□□□ -1.29
COPA-205ENST00000541366 FAM213BQ8TBF2 198 aa7□□□□□ -1.29
COPA-205ENST00000541366 MBD3L1Q8WWY6 194 aa7□□□□□ -1.29
COPA-205ENST00000541366 CDC42SE2Q9NRR3 84 aa7□□□□□ -1.29
COPA-205ENST00000541366 TSHBP01222 138 aa6.99□□□□□ -1.29
COPA-205ENST00000541366 ESDP10768 282 aa6.99□□□□□ -1.29
COPA-205ENST00000541366 PMCHP20382 165 aa6.99□□□□□ -1.29
COPA-205ENST00000541366 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
COPA-205ENST00000541366 KRTAP7-1Q8IUC3 87 aa6.99□□□□□ -1.29
COPA-205ENST00000541366 TMEM242Q9NWH2 141 aa6.99□□□□□ -1.29
COPA-205ENST00000541366 COX7A2LO14548 114 aa6.98□□□□□ -1.29
COPA-205ENST00000541366 GIPP09681 153 aaPredicted RBP6.98□□□□□ -1.29
COPA-205ENST00000541366 CTRLP40313 264 aa6.98□□□□□ -1.29
COPA-205ENST00000541366 RPL13AP40429 203 aaKnown RBP6.98□□□□□ -1.29
COPA-205ENST00000541366 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
COPA-205ENST00000541366 EIF5AL1Q6IS14 154 aaKnown RBP6.98□□□□□ -1.29
COPA-205ENST00000541366 C5orf38Q86SI9 138 aa6.98□□□□□ -1.29
COPA-205ENST00000541366 C9orf62Q8N4C0 152 aa6.98□□□□□ -1.29
COPA-205ENST00000541366 C2orf48Q96LS8 159 aa6.98□□□□□ -1.29
COPA-205ENST00000541366 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
COPA-205ENST00000541366 XKRY2A2RUG3 117 aa6.97□□□□□ -1.29
COPA-205ENST00000541366 G3V3Q6 166 aa6.97□□□□□ -1.29
COPA-205ENST00000541366 I3L3M4 83 aa6.97□□□□□ -1.29
COPA-205ENST00000541366 CCL20P78556 96 aa6.97□□□□□ -1.29
COPA-205ENST00000541366 C11orf52Q96A22 123 aa6.97□□□□□ -1.29
COPA-205ENST00000541366 RNASE7Q9H1E1 156 aaKnown RBP6.97□□□□□ -1.29
COPA-205ENST00000541366 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
COPA-205ENST00000541366 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
COPA-205ENST00000541366 ARPC5O15511 151 aa6.96□□□□□ -1.3
COPA-205ENST00000541366 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
COPA-205ENST00000541366 NUDT10Q8NFP7 164 aa6.96□□□□□ -1.3
COPA-205ENST00000541366 MRAP2Q96G30 205 aa6.96□□□□□ -1.3
COPA-205ENST00000541366 NUDT11Q96G61 164 aa6.96□□□□□ -1.3
COPA-205ENST00000541366 TRAV13-1A0A0B4J241 112 aa6.95□□□□□ -1.3
COPA-205ENST00000541366 GNG4P50150 75 aa6.95□□□□□ -1.3
COPA-205ENST00000541366 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
COPA-205ENST00000541366 MRPL52Q86TS9 123 aaKnown RBP6.95□□□□□ -1.3
COPA-205ENST00000541366 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
COPA-205ENST00000541366 CNFNQ9BYD5 112 aa6.95□□□□□ -1.3
COPA-205ENST00000541366 C1orf196B1AJZ1 125 aa6.94□□□□□ -1.3
COPA-205ENST00000541366 UBE2BP63146 152 aa6.94□□□□□ -1.3
COPA-205ENST00000541366 RNF151Q2KHN1 245 aa6.94□□□□□ -1.3
COPA-205ENST00000541366 GAGE2EQ4V326 116 aa6.94□□□□□ -1.3
COPA-205ENST00000541366 RPP21Q9H633 154 aaKnown RBP6.94□□□□□ -1.3
COPA-205ENST00000541366 GNG13Q9P2W3 67 aa6.94□□□□□ -1.3
COPA-205ENST00000541366 GAGE2DQ9UEU5 116 aa6.94□□□□□ -1.3
COPA-205ENST00000541366 A0A087X002 238 aa6.93□□□□□ -1.3
COPA-205ENST00000541366 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
COPA-205ENST00000541366 M0QXV9 152 aa6.93□□□□□ -1.3
COPA-205ENST00000541366 TSKUQ8WUA8 353 aa6.93□□□□□ -1.3
COPA-205ENST00000541366 CARHSP1Q9Y2V2 147 aaKnown RBP6.93□□□□□ -1.3
COPA-205ENST00000541366 C7orf77A4D0Y5 90 aa6.92□□□□□ -1.3
COPA-205ENST00000541366 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
COPA-205ENST00000541366 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
COPA-205ENST00000541366 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
COPA-205ENST00000541366 MRPL35Q9NZE8 188 aaKnown RBP6.92□□□□□ -1.3
COPA-205ENST00000541366 UMAD1C9J7I0 102 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 SMLR1H3BR10 107 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 POLR2KP53803 58 aaKnown RBP6.91□□□□□ -1.3
COPA-205ENST00000541366 TEX261Q6UWH6 196 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 Q6ZUT4 128 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 IMMP2LQ96T52 175 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 C6orf48Q9UBA6 75 aa6.91□□□□□ -1.3
COPA-205ENST00000541366 ZNF861PO60384 105 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 SMIM15Q7Z3B0 74 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 SMIM12Q96EX1 92 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 KRTAP4-12Q9BQ66 201 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 CDIP1Q9H305 208 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 UBE2D4Q9Y2X8 147 aa6.9□□□□□ -1.3
COPA-205ENST00000541366 K7EN84 100 aa6.89□□□□□ -1.31
COPA-205ENST00000541366 NDUFA1O15239 70 aa6.89□□□□□ -1.31
COPA-205ENST00000541366 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
COPA-205ENST00000541366 OR10D4PQ8NGN7 298 aa6.89□□□□□ -1.31
COPA-205ENST00000541366 SMDT1Q9H4I9 107 aa6.89□□□□□ -1.31
COPA-205ENST00000541366 MED9Q9NWA0 146 aa6.89□□□□□ -1.31
COPA-205ENST00000541366 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
COPA-205ENST00000541366 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
COPA-205ENST00000541366 TYMSOSQ8TAI1 123 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms