RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 STHQ8IWL8 128 aa10.22□□□□□ -0.77
INO80E-203ENST00000540562 CHCHD7Q9BUK0 85 aa10.22□□□□□ -0.77
INO80E-203ENST00000540562 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
INO80E-203ENST00000540562 TRIAP1O43715 76 aa10.22□□□□□ -0.77
INO80E-203ENST00000540562 LOC100131303A0A0U1RQF7 123 aa10.21□□□□□ -0.77
INO80E-203ENST00000540562 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.77
INO80E-203ENST00000540562 CLUHP3Q96NS8 147 aa10.21□□□□□ -0.77
INO80E-203ENST00000540562 RPL32P62910 135 aaKnown RBP10.21□□□□□ -0.78
INO80E-203ENST00000540562 ODF3L2Q3SX64 289 aa10.21□□□□□ -0.78
INO80E-203ENST00000540562 CDIP1Q9H305 208 aa10.21□□□□□ -0.78
INO80E-203ENST00000540562 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.78
INO80E-203ENST00000540562 UBE2D4Q9Y2X8 147 aa10.21□□□□□ -0.78
INO80E-203ENST00000540562 TMEM89A2RUT3 159 aa10.2□□□□□ -0.78
INO80E-203ENST00000540562 DEFB114Q30KQ6 69 aa10.2□□□□□ -0.78
INO80E-203ENST00000540562 TEN1Q86WV5 123 aa10.2□□□□□ -0.78
INO80E-203ENST00000540562 DSCR9P59020 149 aa10.2□□□□□ -0.78
INO80E-203ENST00000540562 PEMTQ9UBM1 199 aa10.2□□□□□ -0.78
INO80E-203ENST00000540562 INSP01308 110 aa10.19□□□□□ -0.78
INO80E-203ENST00000540562 ODF3Q96PU9 254 aa10.19□□□□□ -0.78
INO80E-203ENST00000540562 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
INO80E-203ENST00000540562 C11orf68Q9H3H3 251 aaKnown RBP10.19□□□□□ -0.78
INO80E-203ENST00000540562 TOMM7Q9P0U1 55 aa10.19□□□□□ -0.78
INO80E-203ENST00000540562 ATRQ13535 2644 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 GAGE7O76087 117 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 GAGE12IP0CL82 117 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 C11orf72Q8NBR9 251 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 Q9H8V8 135 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 CKS1BP61024 79 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 SPATA25Q9BR10 227 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 A0A1B0GV72 72 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 DEFB113Q30KQ7 82 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 LYRM7Q5U5X0 104 aa10.18□□□□□ -0.78
INO80E-203ENST00000540562 PPDPFLQ8WWR9 84 aa10.17□□□□□ -0.78
INO80E-203ENST00000540562 VSIG2Q96IQ7 327 aa10.17□□□□□ -0.78
INO80E-203ENST00000540562 TRGV2A0A075B6R0 118 aa10.16□□□□□ -0.78
INO80E-203ENST00000540562 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
INO80E-203ENST00000540562 MEIG1Q5JSS6 88 aa10.16□□□□□ -0.78
INO80E-203ENST00000540562 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
INO80E-203ENST00000540562 ESM1Q9NQ30 184 aa10.16□□□□□ -0.78
INO80E-203ENST00000540562 J3QLI3 93 aa10.16□□□□□ -0.78
INO80E-203ENST00000540562 MRPS36P82909 103 aaKnown RBP10.16□□□□□ -0.78
INO80E-203ENST00000540562 LITAFQ99732 161 aa10.16□□□□□ -0.78
INO80E-203ENST00000540562 A0A096LPF7 62 aa10.15□□□□□ -0.78
INO80E-203ENST00000540562 DNAJC9-AS1A6NH13 148 aa10.15□□□□□ -0.78
INO80E-203ENST00000540562 UNC79Q9P2D8 2635 aa10.15□□□□□ -0.78
INO80E-203ENST00000540562 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
INO80E-203ENST00000540562 ZNF843Q8N446 348 aa10.15□□□□□ -0.79
INO80E-203ENST00000540562 TRBV20-1A0A075B6N2 111 aa10.14□□□□□ -0.79
INO80E-203ENST00000540562 CCL24O00175 119 aa10.14□□□□□ -0.79
INO80E-203ENST00000540562 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
INO80E-203ENST00000540562 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
INO80E-203ENST00000540562 C4orf3Q8WVX3 66 aa10.14□□□□□ -0.79
INO80E-203ENST00000540562 ICOSQ9Y6W8 199 aa10.14□□□□□ -0.79
INO80E-203ENST00000540562 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 PRIMA1Q86XR5 153 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 CRLF1O75462 422 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 DEFB130BP0DP73 79 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 DEFB130AP0DP74 79 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 GAGE6Q13070 117 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 NTM-AS1Q6ZSK4 140 aa10.13□□□□□ -0.79
INO80E-203ENST00000540562 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
INO80E-203ENST00000540562 SMR3AQ99954 134 aa10.12□□□□□ -0.79
INO80E-203ENST00000540562 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
INO80E-203ENST00000540562 ATXN8Q156A1 80 aa10.11□□□□□ -0.79
INO80E-203ENST00000540562 LINC00242Q5T6M2 205 aa10.11□□□□□ -0.79
INO80E-203ENST00000540562 Q8N2B8 174 aa10.11□□□□□ -0.79
INO80E-203ENST00000540562 TINCRA0A1B0GVN0 87 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 TTC32Q5I0X7 151 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 FSHBP01225 129 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 MIAQ16674 131 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 YAE1D1Q9NRH1 226 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 PYGO1Q9Y3Y4 419 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 CRYBA4P53673 196 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
INO80E-203ENST00000540562 UBE2L6O14933 153 aa10.09□□□□□ -0.79
INO80E-203ENST00000540562 DEFB4AO15263 64 aa10.09□□□□□ -0.79
INO80E-203ENST00000540562 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
INO80E-203ENST00000540562 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
INO80E-203ENST00000540562 TRAV4A0A0B4J268 109 aa10.09□□□□□ -0.79
INO80E-203ENST00000540562 OTOGQ6ZRI0 2925 aa10.08□□□□□ -0.8
INO80E-203ENST00000540562 TEP1Q99973 2627 aaKnown RBP10.08□□□□□ -0.8
INO80E-203ENST00000540562 TRGV4A0A0C4DH28 118 aa10.08□□□□□ -0.8
INO80E-203ENST00000540562 SOSTDC1Q6X4U4 206 aa10.08□□□□□ -0.8
INO80E-203ENST00000540562 TRRAPQ9Y4A5 3859 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 H7C423 109 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 ZFAND6Q6FIF0 208 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 RNF183Q96D59 192 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 K7EQD1 137 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 RS1O15537 224 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 PFN2P35080 140 aa10.07□□□□□ -0.8
INO80E-203ENST00000540562 COX6CP09669 75 aa10.06□□□□□ -0.8
INO80E-203ENST00000540562 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
INO80E-203ENST00000540562 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
INO80E-203ENST00000540562 RNF152Q8N8N0 203 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms