RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SRSF3P84103 164 aaKnown RBP4.66□□□□□ -1.66
LRP6-204ENST00000540415 RNASE13Q5GAN3 156 aaKnown RBP4.66□□□□□ -1.66
LRP6-204ENST00000540415 C10orf25Q5T742 122 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 C5orf38Q86SI9 138 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 TMEM101Q96IK0 257 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 C2orf48Q96LS8 159 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 CDC42SE2Q9NRR3 84 aa4.66□□□□□ -1.66
LRP6-204ENST00000540415 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 TSHBP01222 138 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 S100A9P06702 114 aaKnown RBP4.65□□□□□ -1.67
LRP6-204ENST00000540415 TRGC1P0CF51 173 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 ESDP10768 282 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 RPL35P42766 123 aaKnown RBP4.65□□□□□ -1.67
LRP6-204ENST00000540415 LINC01547P58512 204 aaPredicted RBP4.65□□□□□ -1.67
LRP6-204ENST00000540415 UBE2BP63146 152 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 SPAG11BQ08648 103 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 GAGE2EQ4V326 116 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 EIF5AL1Q6IS14 154 aaKnown RBP4.65□□□□□ -1.67
LRP6-204ENST00000540415 TMUB2Q71RG4 321 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 BTF3L4Q96K17 158 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 TMEM242Q9NWH2 141 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 ANAPC11Q9NYG5 84 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 GAGE2DQ9UEU5 116 aa4.65□□□□□ -1.67
LRP6-204ENST00000540415 C19orf71A6NCJ1 209 aa4.64□□□□□ -1.67
LRP6-204ENST00000540415 M0QXV9 152 aa4.64□□□□□ -1.67
LRP6-204ENST00000540415 UPK1BO75841 260 aa4.64□□□□□ -1.67
LRP6-204ENST00000540415 TWIST1Q15672 202 aa4.64□□□□□ -1.67
LRP6-204ENST00000540415 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
LRP6-204ENST00000540415 RNASE7Q9H1E1 156 aaKnown RBP4.64□□□□□ -1.67
LRP6-204ENST00000540415 IGLV7-46A0A075B6I9 117 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 BORCS7-ASMTA0A0B4J1R7 106 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 TRAV13-1A0A0B4J241 112 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 RAB19A4D1S5 217 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 F2Z2F3 143 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 ZNF861PO60384 105 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 IFNA1P01562 189 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 PMCHP20382 165 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 RPS20P60866 119 aaKnown RBP4.63□□□□□ -1.67
LRP6-204ENST00000540415 RNF151Q2KHN1 245 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 KRTAP13-2Q52LG2 175 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 CENPWQ5EE01 88 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 TSKUQ8WUA8 353 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 CYTL1Q9NRR1 136 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 ALG5Q9Y673 324 aa4.63□□□□□ -1.67
LRP6-204ENST00000540415 FXYD6-FXYD2A0A087WZ82 144 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 C1orf196B1AJZ1 125 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 G3V3Q6 166 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 I3L3M4 83 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 PFDN1O60925 122 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 CTRLP40313 264 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 UNQ6190/PRO20217Q6UXQ8 127 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 MRPL52Q86TS9 123 aaKnown RBP4.62□□□□□ -1.67
LRP6-204ENST00000540415 SFT2D1Q8WV19 159 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 MRAP2Q96G30 205 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 MRPL35Q9NZE8 188 aaKnown RBP4.62□□□□□ -1.67
LRP6-204ENST00000540415 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
LRP6-204ENST00000540415 C9orf129Q5T035 196 aaKnown RBP4.61□□□□□ -1.67
LRP6-204ENST00000540415 C9orf62Q8N4C0 152 aa4.61□□□□□ -1.67
LRP6-204ENST00000540415 ORAOV1Q8WV07 137 aa4.61□□□□□ -1.67
LRP6-204ENST00000540415 SMDT1Q9H4I9 107 aa4.61□□□□□ -1.67
LRP6-204ENST00000540415 TRBV20OR9-2A0A075B6H5 130 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 TLX1NBP0CAT3 122 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 CRYGAP11844 174 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 CCL20P78556 96 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 Q6ZUT4 128 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 LINC00173Q6ZV60 143 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 KCNRGQ8N5I3 272 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 FAM213BQ8TBF2 198 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 MBD3L1Q8WWY6 194 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 C11orf52Q96A22 123 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 IMMP2LQ96T52 175 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 CNFNQ9BYD5 112 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 CTDSP1Q9GZU7 261 aa4.6□□□□□ -1.67
LRP6-204ENST00000540415 TRBV6-5A0A0K0K1A5 114 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 C7orf77A4D0Y5 90 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 NDUFA1O15239 70 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 GHRHP01286 108 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 NUDT10Q8NFP7 164 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 OR10D4PQ8NGN7 298 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 S100ZQ8WXG8 99 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 NUDT11Q96G61 164 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 PPDPFQ9H3Y8 114 aa4.59□□□□□ -1.67
LRP6-204ENST00000540415 XKRY2A2RUG3 117 aa4.58□□□□□ -1.68
LRP6-204ENST00000540415 POLR2KP53803 58 aaKnown RBP4.58□□□□□ -1.68
LRP6-204ENST00000540415 LINC00242Q5T6M2 205 aa4.58□□□□□ -1.68
LRP6-204ENST00000540415 LINC00304Q8N9R0 145 aa4.58□□□□□ -1.68
LRP6-204ENST00000540415 ST20Q9HBF5 79 aa4.58□□□□□ -1.68
LRP6-204ENST00000540415 UBE2D4Q9Y2X8 147 aa4.58□□□□□ -1.68
LRP6-204ENST00000540415 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
LRP6-204ENST00000540415 GNG4P50150 75 aa4.57□□□□□ -1.68
LRP6-204ENST00000540415 C2orf82Q6UX34 121 aa4.57□□□□□ -1.68
LRP6-204ENST00000540415 FAM104AQ969W3 186 aa4.57□□□□□ -1.68
LRP6-204ENST00000540415 IGHV3OR16-9A0A0B4J2B5 98 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 TRBV27A0A0K0K1C4 114 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 GIPP09681 153 aaPredicted RBP4.56□□□□□ -1.68
LRP6-204ENST00000540415 KIAA0087Q14695 138 aa4.56□□□□□ -1.68
LRP6-204ENST00000540415 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms