RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 LGALS9BQ3B8N2 356 aa7.06□□□□□ -1.28
CLIP1-212ENST00000540304 LGALS9CQ6DKI2 356 aa7.06□□□□□ -1.28
CLIP1-212ENST00000540304 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
CLIP1-212ENST00000540304 STHQ8IWL8 128 aa7.06□□□□□ -1.28
CLIP1-212ENST00000540304 C3orf22Q8N5N4 141 aa7.06□□□□□ -1.28
CLIP1-212ENST00000540304 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
CLIP1-212ENST00000540304 IGLV1-51P01701 117 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 CMC4P56277 68 aaPredicted RBP7.05□□□□□ -1.28
CLIP1-212ENST00000540304 ZNF876PQ49A33 203 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 LINC00467Q9BRT7 94 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 F5H697 171 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 KRTAP10-3P60369 221 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 ORMDL2Q53FV1 153 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 FAM74A4Q5TZK3 123 aa7.05□□□□□ -1.28
CLIP1-212ENST00000540304 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 ANKRD29Q8N6D5 301 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 CHAC1Q9BUX1 264 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 TTTY13Q9BZ97 58 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 C6orf226Q5I0X4 101 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 CEND1Q8N111 149 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 DPH3Q96FX2 82 aa7.04□□□□□ -1.28
CLIP1-212ENST00000540304 M0R2P5 195 aa7.03□□□□□ -1.28
CLIP1-212ENST00000540304 ZNF56Q15929 161 aa7.03□□□□□ -1.28
CLIP1-212ENST00000540304 RETNQ9HD89 108 aa7.03□□□□□ -1.28
CLIP1-212ENST00000540304 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
CLIP1-212ENST00000540304 PIK3CD-AS1Q5SR53 167 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 XCL2Q9UBD3 114 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 TRBV6-5A0A0K0K1A5 114 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 PRSS1P07477 247 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 PSMB2P49721 201 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 GAGE2AQ6NT46 116 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
CLIP1-212ENST00000540304 M0QY20 66 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 UQCRQO14949 82 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 POLR2KP53803 58 aaKnown RBP7.01□□□□□ -1.29
CLIP1-212ENST00000540304 SFTA2Q6UW10 78 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 C11orf72Q8NBR9 251 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 TOMM6Q96B49 74 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 ATRQ13535 2644 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 NACAE9PAV3 2078 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 VCYO14598 125 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 CEMP1Q6PRD7 247 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-212ENST00000540304 LINC00482Q8N8I6 264 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 HHLA3Q9XRX5 114 aa7.01□□□□□ -1.29
CLIP1-212ENST00000540304 A0A0U1RQV1 116 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 A8MWV9 139 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 TRBV27A0A0K0K1C4 114 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 SDHAF1A6NFY7 115 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 J3QQQ9 107 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
CLIP1-212ENST00000540304 C2orf66Q6UXQ4 117 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 C1orf158Q8N1D5 194 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 CYSTM1Q9H1C7 97 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 HIGD1BQ9P298 99 aa7□□□□□ -1.29
CLIP1-212ENST00000540304 H7C1H1 209 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 PFN2P35080 140 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 TAL2Q16559 108 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 SCGB3A1Q96QR1 104 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 WFDC10AQ9H1F0 79 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 TRRAPQ9Y4A5 3859 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 ZFP2Q6ZN57 461 aa6.99□□□□□ -1.29
CLIP1-212ENST00000540304 TEP1Q99973 2627 aaKnown RBP6.98□□□□□ -1.29
CLIP1-212ENST00000540304 IGHV3OR16-12A0A075B7B8 117 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 IGKV2D-26A0A0A0MRZ7 120 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 IGHV3-73A0A0B4J1V6 119 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 LINC01549A6NIU2 74 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 DPM2O94777 84 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 IGKCP01834 107 aa6.98□□□□□ -1.29
CLIP1-212ENST00000540304 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
CLIP1-212ENST00000540304 F8P00451 2351 aa6.97□□□□□ -1.29
CLIP1-212ENST00000540304 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
CLIP1-212ENST00000540304 GIG44P09565 113 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-212ENST00000540304 LYRM7Q5U5X0 104 aa6.97□□□□□ -1.29
CLIP1-212ENST00000540304 SBSPONQ8IVN8 264 aa6.97□□□□□ -1.29
CLIP1-212ENST00000540304 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
CLIP1-212ENST00000540304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-212ENST00000540304 NBEAL2Q6ZNJ1 2754 aa6.96□□□□□ -1.29
CLIP1-212ENST00000540304 hADV29S1A0JD25 119 aa6.96□□□□□ -1.29
CLIP1-212ENST00000540304 PMVKQ15126 192 aa6.96□□□□□ -1.29
CLIP1-212ENST00000540304 TMEM263Q8WUH6 116 aaKnown RBP6.96□□□□□ -1.29
CLIP1-212ENST00000540304 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.29
CLIP1-212ENST00000540304 TP53TG1Q9Y2A0 90 aa6.96□□□□□ -1.29
CLIP1-212ENST00000540304 I3L3M4 83 aa6.96□□□□□ -1.3
CLIP1-212ENST00000540304 PLNP26678 52 aa6.96□□□□□ -1.3
CLIP1-212ENST00000540304 RHOHQ15669 191 aa6.96□□□□□ -1.3
CLIP1-212ENST00000540304 NEXN-AS1Q8NBZ9 246 aa6.96□□□□□ -1.3
CLIP1-212ENST00000540304 F8VRH5 84 aa6.95□□□□□ -1.3
CLIP1-212ENST00000540304 TSHBP01222 138 aa6.95□□□□□ -1.3
CLIP1-212ENST00000540304 IGIPA6NJ69 53 aa6.95□□□□□ -1.3
CLIP1-212ENST00000540304 P0DMU3 169 aa6.95□□□□□ -1.3
CLIP1-212ENST00000540304 FAM231AP0DMU4 169 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms