RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 IGHV3-53P01767 116 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 MT-ATP8P03928 68 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 Q6ZTI0 123 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 TEN1Q86WV5 123 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 X6R8D5 127 aa12.1□□□□□ -0.47
COPS3-212ENST00000539941 TRBV20-1A0A075B6N2 111 aa12.09□□□□□ -0.47
COPS3-212ENST00000539941 TRBV27A0A0K0K1C4 114 aa12.09□□□□□ -0.47
COPS3-212ENST00000539941 PLNP26678 52 aa12.09□□□□□ -0.47
COPS3-212ENST00000539941 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
COPS3-212ENST00000539941 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
COPS3-212ENST00000539941 PRSS1P07477 247 aa12.08□□□□□ -0.48
COPS3-212ENST00000539941 KIR2DL4Q99706 377 aa12.08□□□□□ -0.48
COPS3-212ENST00000539941 TRBV7-3A0A075B6L6 115 aa12.07□□□□□ -0.48
COPS3-212ENST00000539941 XGP55808 180 aa12.07□□□□□ -0.48
COPS3-212ENST00000539941 Q6Q795 121 aa12.07□□□□□ -0.48
COPS3-212ENST00000539941 DNAJC30Q96LL9 226 aa12.07□□□□□ -0.48
COPS3-212ENST00000539941 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 GAGE7O76087 117 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 GAGE4Q13068 117 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 ZC2HC1BQ5TFG8 222 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 DEFB135Q30KP9 77 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 SBSPONQ8IVN8 264 aa12.06□□□□□ -0.48
COPS3-212ENST00000539941 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
COPS3-212ENST00000539941 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
COPS3-212ENST00000539941 Q6ZSN1 163 aa12.04□□□□□ -0.48
COPS3-212ENST00000539941 TNFRSF18Q9Y5U5 241 aa12.04□□□□□ -0.48
COPS3-212ENST00000539941 TRBV10-1A0A0K0K1A3 114 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 I3L3M4 83 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 RHOHQ15669 191 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 MIFP14174 115 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
COPS3-212ENST00000539941 A0A087WX48 190 aa12.02□□□□□ -0.49
COPS3-212ENST00000539941 B5MCH6 92 aa12.02□□□□□ -0.49
COPS3-212ENST00000539941 P0DMU3 169 aa12.02□□□□□ -0.49
COPS3-212ENST00000539941 FAM231AP0DMU4 169 aa12.02□□□□□ -0.49
COPS3-212ENST00000539941 FAM231CP0DMU5 169 aa12.02□□□□□ -0.49
COPS3-212ENST00000539941 TRAV12-1A0A0B4J245 112 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 MYMXA0A1B0GTQ4 84 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 PRSS29PA6NIE9 313 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 K7EQD1 137 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 SMCPP49901 116 aaPredicted RBP12.01□□□□□ -0.49
COPS3-212ENST00000539941 EMP1P54849 157 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 GAGE2BQ13066 116 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 GAGE2EQ4V326 116 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 C2orf66Q6UXQ4 117 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 NFE4Q86UQ8 179 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 GAGE2DQ9UEU5 116 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
COPS3-212ENST00000539941 UBE2D3P61077 147 aa12□□□□□ -0.49
COPS3-212ENST00000539941 UBE2D2P62837 147 aa12□□□□□ -0.49
COPS3-212ENST00000539941 TP53TG1Q9Y2A0 90 aa12□□□□□ -0.49
COPS3-212ENST00000539941 DNAH3Q8TD57 4116 aa12□□□□□ -0.49
COPS3-212ENST00000539941 TSHBP01222 138 aa12□□□□□ -0.49
COPS3-212ENST00000539941 HERV-K104P63124 156 aa12□□□□□ -0.49
COPS3-212ENST00000539941 SPANXDQ9BXN6 97 aa12□□□□□ -0.49
COPS3-212ENST00000539941 IGHV4-28A0A0C4DH34 117 aa11.99□□□□□ -0.49
COPS3-212ENST00000539941 TRBV6-4A0A1B0GX49 114 aa11.99□□□□□ -0.49
COPS3-212ENST00000539941 SNCGO76070 127 aa11.99□□□□□ -0.49
COPS3-212ENST00000539941 NDUFV3P56181 108 aaKnown RBP11.99□□□□□ -0.49
COPS3-212ENST00000539941 TTC32Q5I0X7 151 aa11.99□□□□□ -0.49
COPS3-212ENST00000539941 Q8NAQ8 132 aa11.99□□□□□ -0.49
COPS3-212ENST00000539941 IFITM1P13164 125 aa11.98□□□□□ -0.49
COPS3-212ENST00000539941 UBE2D1P51668 147 aa11.98□□□□□ -0.49
COPS3-212ENST00000539941 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
COPS3-212ENST00000539941 TMEM126AQ9H061 195 aa11.98□□□□□ -0.49
COPS3-212ENST00000539941 PSMB2P49721 201 aa11.97□□□□□ -0.49
COPS3-212ENST00000539941 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
COPS3-212ENST00000539941 MRPL23Q16540 153 aaKnown RBP11.97□□□□□ -0.49
COPS3-212ENST00000539941 MAPKAPK5-AS1Q8N8E1 139 aa11.97□□□□□ -0.49
COPS3-212ENST00000539941 SLC25A29Q8N8R3 303 aa11.97□□□□□ -0.49
COPS3-212ENST00000539941 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
COPS3-212ENST00000539941 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
COPS3-212ENST00000539941 TRGV4A0A0C4DH28 118 aa11.97□□□□□ -0.49
COPS3-212ENST00000539941 FAM222AQ5U5X8 452 aa11.97□□□□□ -0.49
COPS3-212ENST00000539941 F8VRH5 84 aa11.96□□□□□ -0.5
COPS3-212ENST00000539941 DEFB130BP0DP73 79 aa11.96□□□□□ -0.5
COPS3-212ENST00000539941 DEFB130AP0DP74 79 aa11.96□□□□□ -0.5
COPS3-212ENST00000539941 FHL2Q14192 279 aa11.96□□□□□ -0.5
COPS3-212ENST00000539941 TTTY13Q9BZ97 58 aa11.96□□□□□ -0.5
COPS3-212ENST00000539941 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.5
COPS3-212ENST00000539941 Q9UF83 564 aa11.96□□□□□ -0.5
COPS3-212ENST00000539941 NHLRC4P0CG21 123 aaPredicted RBP11.95□□□□□ -0.5
COPS3-212ENST00000539941 SCGB1C2P0DMR2 95 aa11.95□□□□□ -0.5
COPS3-212ENST00000539941 C20orf203Q8NBC4 194 aa11.95□□□□□ -0.5
COPS3-212ENST00000539941 TMEM141Q96I45 108 aa11.95□□□□□ -0.5
COPS3-212ENST00000539941 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
COPS3-212ENST00000539941 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
COPS3-212ENST00000539941 ZNRF2Q8NHG8 242 aa11.94□□□□□ -0.5
COPS3-212ENST00000539941 LINC01600Q96MT4 127 aa11.94□□□□□ -0.5
COPS3-212ENST00000539941 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
COPS3-212ENST00000539941 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
COPS3-212ENST00000539941 KPRPQ5T749 579 aaPredicted RBP11.94□□□□□ -0.5
COPS3-212ENST00000539941 PRADC1Q9BSG0 188 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms