RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PLA2G2DQ9UNK4 145 aa9.79□□□□□ -0.84
USB1-203ENST00000539737 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 HNRNPA3P51991 378 aaKnown RBP9.78□□□□□ -0.84
USB1-203ENST00000539737 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
USB1-203ENST00000539737 MIAQ16674 131 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 C14orf177Q52M58 125 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 ORMDL3Q8N138 153 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 CLRN3Q8NCR9 226 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 C1orf43Q9BWL3 253 aa9.78□□□□□ -0.84
USB1-203ENST00000539737 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.85
USB1-203ENST00000539737 TCAPO15273 167 aa9.77□□□□□ -0.85
USB1-203ENST00000539737 TNFRSF6BO95407 300 aa9.77□□□□□ -0.85
USB1-203ENST00000539737 FCER1GP30273 86 aa9.77□□□□□ -0.85
USB1-203ENST00000539737 AMMECR1LQ6DCA0 310 aa9.77□□□□□ -0.85
USB1-203ENST00000539737 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
USB1-203ENST00000539737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
USB1-203ENST00000539737 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
USB1-203ENST00000539737 ZNF25P17030 456 aaPredicted RBP9.76□□□□□ -0.85
USB1-203ENST00000539737 SERTAD4-AS1Q5TG53 156 aa9.76□□□□□ -0.85
USB1-203ENST00000539737 ENHOQ6UWT2 76 aa9.76□□□□□ -0.85
USB1-203ENST00000539737 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
USB1-203ENST00000539737 SVBPQ8N300 66 aa9.76□□□□□ -0.85
USB1-203ENST00000539737 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
USB1-203ENST00000539737 LAMTOR2Q9Y2Q5 125 aa9.76□□□□□ -0.85
USB1-203ENST00000539737 APOC3P02656 99 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 ESDP10768 282 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 REG3AQ06141 175 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 CLPSL2Q6UWE3 100 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 TMEM136Q6ZRR5 245 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 SMIM2Q9BVW6 85 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 RPS10P5Q9NQ39 176 aa9.75□□□□□ -0.85
USB1-203ENST00000539737 IGLV4-60A0A075B6I1 120 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 SNAPINO95295 136 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 NPYP01303 97 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 FGF6P10767 208 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 SMAGPQ0VAQ4 97 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 RNASEKQ6P5S7 137 aaKnown RBP9.74□□□□□ -0.85
USB1-203ENST00000539737 CIRBP-AS1Q8TBR5 109 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
USB1-203ENST00000539737 TRAV8-4A0A0B4J246 113 aa9.73□□□□□ -0.85
USB1-203ENST00000539737 COX19Q49B96 90 aa9.73□□□□□ -0.85
USB1-203ENST00000539737 HLA-DQA1P01909 254 aa9.72□□□□□ -0.85
USB1-203ENST00000539737 MRPL52Q86TS9 123 aaKnown RBP9.72□□□□□ -0.85
USB1-203ENST00000539737 OR5A1Q8NGJ0 315 aa9.72□□□□□ -0.85
USB1-203ENST00000539737 TMEM18Q96B42 140 aa9.72□□□□□ -0.85
USB1-203ENST00000539737 LRP2P98164 4655 aa9.71□□□□□ -0.85
USB1-203ENST00000539737 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
USB1-203ENST00000539737 MAP1LC3AQ9H492 121 aa9.71□□□□□ -0.86
USB1-203ENST00000539737 MT-ND6P03923 174 aa9.7□□□□□ -0.86
USB1-203ENST00000539737 GNB1LQ9BYB4 327 aa9.7□□□□□ -0.86
USB1-203ENST00000539737 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
USB1-203ENST00000539737 RNF213Q63HN8 5207 aa9.68□□□□□ -0.86
USB1-203ENST00000539737 IGLV10-54A0A075B6I4 117 aa9.68□□□□□ -0.86
USB1-203ENST00000539737 RAB5AP20339 215 aa9.68□□□□□ -0.86
USB1-203ENST00000539737 DGAT2L7PQ6IED9 249 aa9.68□□□□□ -0.86
USB1-203ENST00000539737 CSDC2Q9Y534 153 aaKnown RBP9.68□□□□□ -0.86
USB1-203ENST00000539737 TNXBP22105 4242 aa9.68□□□□□ -0.86
USB1-203ENST00000539737 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
USB1-203ENST00000539737 OXTP01178 125 aa9.67□□□□□ -0.86
USB1-203ENST00000539737 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
USB1-203ENST00000539737 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
USB1-203ENST00000539737 ODF1Q14990 250 aa9.66□□□□□ -0.86
USB1-203ENST00000539737 KRTAP26-1Q6PEX3 210 aa9.66□□□□□ -0.86
USB1-203ENST00000539737 Q8N8P6 123 aa9.66□□□□□ -0.86
USB1-203ENST00000539737 NXT2Q9NPJ8 142 aaKnown RBP9.66□□□□□ -0.86
USB1-203ENST00000539737 CDC42SE2Q9NRR3 84 aa9.66□□□□□ -0.86
USB1-203ENST00000539737 LOC389332A0A1B0GUA5 103 aa9.65□□□□□ -0.86
USB1-203ENST00000539737 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
USB1-203ENST00000539737 K7EMI3 77 aa9.65□□□□□ -0.86
USB1-203ENST00000539737 ZNF664Q8N3J9 261 aa9.65□□□□□ -0.86
USB1-203ENST00000539737 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.86
USB1-203ENST00000539737 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
USB1-203ENST00000539737 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
USB1-203ENST00000539737 KIAA1644Q3SXP7 199 aa9.64□□□□□ -0.87
USB1-203ENST00000539737 ORMDL2Q53FV1 153 aa9.64□□□□□ -0.87
USB1-203ENST00000539737 CHCHD10Q8WYQ3 142 aaPredicted RBP9.64□□□□□ -0.87
USB1-203ENST00000539737 MRPL18Q9H0U6 180 aaKnown RBP9.64□□□□□ -0.87
USB1-203ENST00000539737 TGIF2-C20orf24A0A0A6YYL0 155 aa9.63□□□□□ -0.87
USB1-203ENST00000539737 GAGE12HA6NDE8 117 aa9.63□□□□□ -0.87
USB1-203ENST00000539737 PANO1I0J062 215 aa9.63□□□□□ -0.87
USB1-203ENST00000539737 RPL39P62891 51 aaKnown RBP9.63□□□□□ -0.87
USB1-203ENST00000539737 SS18Q15532 418 aa9.63□□□□□ -0.87
USB1-203ENST00000539737 SLC7A5P1Q8MH63 180 aa9.63□□□□□ -0.87
USB1-203ENST00000539737 LINC00959A0A1B0GUT2 108 aa9.62□□□□□ -0.87
USB1-203ENST00000539737 CCL25O15444 150 aa9.62□□□□□ -0.87
USB1-203ENST00000539737 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
USB1-203ENST00000539737 Q6ZUT4 128 aa9.62□□□□□ -0.87
USB1-203ENST00000539737 IFI27P40305 119 aaPredicted RBP9.61□□□□□ -0.87
USB1-203ENST00000539737 MRPS36P82909 103 aaKnown RBP9.61□□□□□ -0.87
USB1-203ENST00000539737 CFAP161Q6P656 301 aa9.61□□□□□ -0.87
USB1-203ENST00000539737 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
USB1-203ENST00000539737 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
USB1-203ENST00000539737 G0S2P27469 103 aa9.6□□□□□ -0.87
USB1-203ENST00000539737 XCL1P47992 114 aa9.6□□□□□ -0.87
USB1-203ENST00000539737 CYSLTR1Q9Y271 337 aa9.6□□□□□ -0.87
USB1-203ENST00000539737 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
USB1-203ENST00000539737 TRAPPC1Q9Y5R8 145 aa9.6□□□□□ -0.87
USB1-203ENST00000539737 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms