RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 EPPK1P58107 5090 aaKnown RBP8.81□□□□□ -1
CCDC42-202ENST00000539522 SYS1-DBNDD2H3BUS1 97 aa8.81□□□□□ -1
CCDC42-202ENST00000539522 M0R2N4 97 aa8.81□□□□□ -1
CCDC42-202ENST00000539522 SCGB1D1O95968 90 aa8.81□□□□□ -1
CCDC42-202ENST00000539522 CHCHD7Q9BUK0 85 aa8.81□□□□□ -1
CCDC42-202ENST00000539522 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
CCDC42-202ENST00000539522 IGIPA6NJ69 53 aa8.8□□□□□ -1
CCDC42-202ENST00000539522 PRSS1P07477 247 aa8.8□□□□□ -1
CCDC42-202ENST00000539522 DNAH10OSP0CZ25 163 aa8.8□□□□□ -1
CCDC42-202ENST00000539522 SMAGPQ0VAQ4 97 aa8.8□□□□□ -1
CCDC42-202ENST00000539522 PYGO1Q9Y3Y4 419 aa8.8□□□□□ -1
CCDC42-202ENST00000539522 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 H7C423 109 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 SIVA1O15304 175 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 NPSP0C0P6 89 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 SMIM6P0DI80 62 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 RPL39P62891 51 aaKnown RBP8.79□□□□□ -1
CCDC42-202ENST00000539522 PYY3Q5JQD4 70 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 Q6ZN92 141 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 TIMM17AQ99595 171 aa8.79□□□□□ -1
CCDC42-202ENST00000539522 TRBV25-1A0A075B6N4 114 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 TRAV8-6A0A0B4J262 113 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 C20orf202A1L168 122 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 TMEM243Q9BU79 118 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 TIMM21Q9BVV7 248 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 SPANXA1Q9NS26 97 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 HECTD4Q9Y4D8 3996 aa8.78□□□□□ -1
CCDC42-202ENST00000539522 LINC00518Q8N0U6 118 aa8.77□□□□□ -1.01
CCDC42-202ENST00000539522 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
CCDC42-202ENST00000539522 RTL8CO15255 209 aa8.76□□□□□ -1.01
CCDC42-202ENST00000539522 LINC01556Q5JQF7 62 aa8.76□□□□□ -1.01
CCDC42-202ENST00000539522 LINC01545Q5VT33 79 aa8.76□□□□□ -1.01
CCDC42-202ENST00000539522 Q8N976 141 aa8.76□□□□□ -1.01
CCDC42-202ENST00000539522 CSDC2Q9Y534 153 aaKnown RBP8.76□□□□□ -1.01
CCDC42-202ENST00000539522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.75□□□□□ -1.01
CCDC42-202ENST00000539522 IGKV2-29A2NJV5 120 aaPredicted RBP8.75□□□□□ -1.01
CCDC42-202ENST00000539522 H0Y8G0 127 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 UBE2L6O14933 153 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 IGHV3-33P01772 117 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 PMVKQ15126 192 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 DGAT2L7PQ6IED9 249 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 MRPL52Q86TS9 123 aaKnown RBP8.75□□□□□ -1.01
CCDC42-202ENST00000539522 VCX2Q9H322 139 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 UBE2D4Q9Y2X8 147 aa8.75□□□□□ -1.01
CCDC42-202ENST00000539522 A0A087WX48 190 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 MRPS36P82909 103 aaKnown RBP8.74□□□□□ -1.01
CCDC42-202ENST00000539522 MPV17L2Q567V2 206 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
CCDC42-202ENST00000539522 BAALCQ8WXS3 180 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 C12orf57Q99622 126 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 CHCHD5Q9BSY4 110 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 CST9LQ9H4G1 147 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 DNAH5Q8TE73 4624 aa8.74□□□□□ -1.01
CCDC42-202ENST00000539522 PRSS29PA6NIE9 313 aa8.73□□□□□ -1.01
CCDC42-202ENST00000539522 FGF6P10767 208 aa8.73□□□□□ -1.01
CCDC42-202ENST00000539522 PKIAP61925 76 aa8.73□□□□□ -1.01
CCDC42-202ENST00000539522 S100A12P80511 92 aa8.73□□□□□ -1.01
CCDC42-202ENST00000539522 AMMECR1LQ6DCA0 310 aa8.73□□□□□ -1.01
CCDC42-202ENST00000539522 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
CCDC42-202ENST00000539522 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
CCDC42-202ENST00000539522 ZNF25P17030 456 aaPredicted RBP8.72□□□□□ -1.01
CCDC42-202ENST00000539522 GAGE6Q13070 117 aa8.72□□□□□ -1.01
CCDC42-202ENST00000539522 ODF1Q14990 250 aa8.72□□□□□ -1.01
CCDC42-202ENST00000539522 TEX43Q6ZNM6 134 aa8.72□□□□□ -1.01
CCDC42-202ENST00000539522 OR5A1Q8NGJ0 315 aa8.72□□□□□ -1.01
CCDC42-202ENST00000539522 OPRPNQ99935 248 aaPredicted RBP8.72□□□□□ -1.01
CCDC42-202ENST00000539522 CHTOPQ9Y3Y2 248 aaKnown RBP8.72□□□□□ -1.01
CCDC42-202ENST00000539522 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 A0A1B0GUV1 79 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 IBA57-AS1B1ANH7 110 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 TMEM262E9PQX1 116 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 ZNF664Q8N3J9 261 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 AMELXQ99217 191 aa8.71□□□□□ -1.02
CCDC42-202ENST00000539522 DYNC1H1Q14204 4646 aaKnown RBP8.71□□□□□ -1.02
CCDC42-202ENST00000539522 F8VRH5 84 aa8.7□□□□□ -1.02
CCDC42-202ENST00000539522 DPM2O94777 84 aa8.7□□□□□ -1.02
CCDC42-202ENST00000539522 RBX1P62877 108 aa8.7□□□□□ -1.02
CCDC42-202ENST00000539522 PMCHL2Q9BQD1 86 aa8.7□□□□□ -1.02
CCDC42-202ENST00000539522 CDC42SE2Q9NRR3 84 aa8.7□□□□□ -1.02
CCDC42-202ENST00000539522 PKHD1P08F94 4074 aa8.7□□□□□ -1.02
CCDC42-202ENST00000539522 TRAV9-2A0A087WT02 112 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 K7EP13 123 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 IGKCP01834 107 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 PLNP26678 52 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 ENHOQ6UWT2 76 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 C2orf88Q9BSF0 95 aa8.69□□□□□ -1.02
CCDC42-202ENST00000539522 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
CCDC42-202ENST00000539522 HSBP1L1C9JCN9 74 aa8.68□□□□□ -1.02
CCDC42-202ENST00000539522 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
CCDC42-202ENST00000539522 ZC2HC1BQ5TFG8 222 aa8.68□□□□□ -1.02
CCDC42-202ENST00000539522 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
CCDC42-202ENST00000539522 ATOH7Q8N100 152 aa8.68□□□□□ -1.02
CCDC42-202ENST00000539522 C10orf126Q8N4M7 172 aa8.68□□□□□ -1.02
CCDC42-202ENST00000539522 VAMP8Q9BV40 100 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms