RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 RHEBQ15382 184 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 ADIRFQ15847 76 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 LYPD5Q6UWN5 251 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 NTM-AS1Q6ZSK4 140 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 C15orf54Q8N8G6 183 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 OR4C5Q8NGB2 326 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 TMEM191AQ9H0A3 160 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 PHLDA3Q9Y5J5 127 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 A0A087WWC5 75 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 TRBV6-5A0A0K0K1A5 114 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 C7orf77A4D0Y5 90 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 RAB4AP20338 218 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 S100A4P26447 101 aaKnown RBP3.38□□□□□ -1.87
SSPN-206ENST00000539019 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
SSPN-206ENST00000539019 RAB4BP61018 213 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 CACNG7P62955 275 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 SLAQ13239 276 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 C15orf53Q8NAA6 179 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 FAM104AQ969W3 186 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 PGLYRP4Q96LB8 373 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 TMEM242Q9NWH2 141 aa3.38□□□□□ -1.87
SSPN-206ENST00000539019 VPS13BQ7Z7G8 4022 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 IGLV2-18A0A075B6J9 118 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 TRAV26-2A0A0B4J265 109 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 IGHV3-38A0A0C4DH36 116 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 A0A1B0GUT8 65 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 HTN3P15516 51 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 POLR2KP53803 58 aaKnown RBP3.37□□□□□ -1.87
SSPN-206ENST00000539019 RHOHQ15669 191 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 FAM104BQ5XKR9 115 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 Q6ZRN7 208 aaPredicted RBP3.37□□□□□ -1.87
SSPN-206ENST00000539019 CBLN2Q8IUK8 224 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 IMMP2LQ96T52 175 aa3.37□□□□□ -1.87
SSPN-206ENST00000539019 KLK5Q9Y337 293 aaPredicted RBP3.37□□□□□ -1.87
SSPN-206ENST00000539019 MRPS16Q9Y3D3 137 aaKnown RBP3.37□□□□□ -1.87
SSPN-206ENST00000539019 TRBV24-1A0A075B6N3 115 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 XKRY2A2RUG3 117 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 COLCA2A8K830 154 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 MT-ND4LP03901 98 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 RAB5BP61020 215 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 MRPL51Q4U2R6 128 aaKnown RBP3.36□□□□□ -1.87
SSPN-206ENST00000539019 SPANXN1Q5VSR9 72 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 TMEM136Q6ZRR5 245 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 AMN1Q8IY45 258 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
SSPN-206ENST00000539019 AP1S3Q96PC3 154 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 DPH3P1Q9H4G8 78 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 NAT8BQ9UHF3 227 aa3.36□□□□□ -1.87
SSPN-206ENST00000539019 TRBV7-3A0A075B6L6 115 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 C1orf196B1AJZ1 125 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 PPP1R2P9O14990 202 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 RTL8CO15255 209 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 SSTP61278 116 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 ELOBQ15370 118 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
SSPN-206ENST00000539019 FAM74A4Q5TZK3 123 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 KRTAP26-1Q6PEX3 210 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 ATP5L2Q7Z4Y8 100 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 WFDC10BQ8IUB3 73 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 FRZBQ92765 325 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 TPPP3Q9BW30 176 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 GTSF1LQ9H1H1 148 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
SSPN-206ENST00000539019 TRBV27A0A0K0K1C4 114 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 SMKR1H3BMG3 65 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 TRGC1P0CF51 173 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 ESDP10768 282 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 RPL32P62910 135 aaKnown RBP3.34□□□□□ -1.88
SSPN-206ENST00000539019 IQCJQ1A5X6 159 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 LELP1Q5T871 98 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 RASL11AQ6T310 242 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 REG3GQ6UW15 175 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 NEGR1Q7Z3B1 354 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 DNAJC30Q96LL9 226 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 TMEM70Q9BUB7 260 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 CHCHD7Q9BUK0 85 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 NIT2Q9NQR4 276 aa3.34□□□□□ -1.88
SSPN-206ENST00000539019 TRAV9-1A0A075B6T8 112 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 TRBV6-8A0A0A6YYG3 113 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 NBDYA0A0U1RRE5 68 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 A0A1B0GW15 77 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 LINC01546A6NGU7 62 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 S100A6P06703 90 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 RAB5AP20339 215 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 NDUFV3P56181 108 aaKnown RBP3.33□□□□□ -1.88
SSPN-206ENST00000539019 HBBP68871 147 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 LINC01556Q5JQF7 62 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 MRPL54Q6P161 138 aaKnown RBP3.33□□□□□ -1.88
SSPN-206ENST00000539019 NIT1Q86X76 327 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 ATP6V0E2Q8NHE4 81 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 BTF3L4Q96K17 158 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 PRADC1Q9BSG0 188 aa3.33□□□□□ -1.88
SSPN-206ENST00000539019 TGIF2-C20orf24A0A0A6YYL0 155 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 SDHAF1A6NFY7 115 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 LY6G6CO95867 125 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 NCR2O95944 276 aa3.32□□□□□ -1.88
SSPN-206ENST00000539019 NPYP01303 97 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms