RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 C7orf77A4D0Y5 90 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 PRSS1P07477 247 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 OR5A1Q8NGJ0 315 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 TIMM21Q9BVV7 248 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 SMIM2Q9BVW6 85 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 UBE2D4Q9Y2X8 147 aa8.91□□□□□ -0.98
CD9-208ENST00000538834 IGLV10-54A0A075B6I4 117 aa8.9□□□□□ -0.98
CD9-208ENST00000538834 DGAT2L7PQ6IED9 249 aa8.9□□□□□ -0.98
CD9-208ENST00000538834 ORMDL3Q8N138 153 aa8.9□□□□□ -0.98
CD9-208ENST00000538834 KIR2DL4Q99706 377 aa8.9□□□□□ -0.98
CD9-208ENST00000538834 LAMTOR2Q9Y2Q5 125 aa8.9□□□□□ -0.98
CD9-208ENST00000538834 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.89□□□□□ -0.99
CD9-208ENST00000538834 TCAPO15273 167 aa8.89□□□□□ -0.99
CD9-208ENST00000538834 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
CD9-208ENST00000538834 TMEM136Q6ZRR5 245 aa8.89□□□□□ -0.99
CD9-208ENST00000538834 CLRN3Q8NCR9 226 aa8.89□□□□□ -0.99
CD9-208ENST00000538834 LINC00959A0A1B0GUT2 108 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 HLA-DQA1P01909 254 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 SLPIP03973 132 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
CD9-208ENST00000538834 ZNF664Q8N3J9 261 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 C15orf56Q8N910 161 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 PRELID3AQ96N28 172 aa8.88□□□□□ -0.99
CD9-208ENST00000538834 CNBPP62633 177 aaKnown RBP8.87□□□□□ -0.99
CD9-208ENST00000538834 FOXI1Q12951 378 aa8.87□□□□□ -0.99
CD9-208ENST00000538834 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
CD9-208ENST00000538834 FCER1GP30273 86 aa8.86□□□□□ -0.99
CD9-208ENST00000538834 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
CD9-208ENST00000538834 CCL25O15444 150 aa8.85□□□□□ -0.99
CD9-208ENST00000538834 RHEBQ15382 184 aa8.85□□□□□ -0.99
CD9-208ENST00000538834 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
CD9-208ENST00000538834 TMEM101Q96IK0 257 aa8.85□□□□□ -0.99
CD9-208ENST00000538834 SRRM2Q9UQ35 2752 aaKnown RBP8.85□□□□□ -0.99
CD9-208ENST00000538834 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
CD9-208ENST00000538834 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
CD9-208ENST00000538834 SDIM1Q6ZPB5 146 aa8.84□□□□□ -0.99
CD9-208ENST00000538834 Q8N8P6 123 aa8.84□□□□□ -0.99
CD9-208ENST00000538834 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
CD9-208ENST00000538834 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
CD9-208ENST00000538834 SMAGPQ0VAQ4 97 aa8.83□□□□□ -1
CD9-208ENST00000538834 CD164L2Q6UWJ8 174 aa8.83□□□□□ -1
CD9-208ENST00000538834 TMEM18Q96B42 140 aa8.83□□□□□ -1
CD9-208ENST00000538834 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
CD9-208ENST00000538834 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
CD9-208ENST00000538834 K7EMI3 77 aa8.82□□□□□ -1
CD9-208ENST00000538834 CIRBPQ14011 172 aaKnown RBP8.82□□□□□ -1
CD9-208ENST00000538834 Q6ZUT4 128 aa8.82□□□□□ -1
CD9-208ENST00000538834 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
CD9-208ENST00000538834 LINC01546A6NGU7 62 aa8.81□□□□□ -1
CD9-208ENST00000538834 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
CD9-208ENST00000538834 CHAC1Q9BUX1 264 aa8.81□□□□□ -1
CD9-208ENST00000538834 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
CD9-208ENST00000538834 SS18Q15532 418 aa8.8□□□□□ -1
CD9-208ENST00000538834 COX19Q49B96 90 aa8.8□□□□□ -1
CD9-208ENST00000538834 CFAP161Q6P656 301 aa8.8□□□□□ -1
CD9-208ENST00000538834 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
CD9-208ENST00000538834 hDV102S1A0JD36 115 aa8.79□□□□□ -1
CD9-208ENST00000538834 HAMPP81172 84 aa8.79□□□□□ -1
CD9-208ENST00000538834 SCXQ7RTU7 201 aa8.79□□□□□ -1
CD9-208ENST00000538834 YPEL4Q96NS1 127 aa8.79□□□□□ -1
CD9-208ENST00000538834 OPRPNQ99935 248 aaPredicted RBP8.79□□□□□ -1
CD9-208ENST00000538834 ALKBH7Q9BT30 221 aaPredicted RBP8.79□□□□□ -1
CD9-208ENST00000538834 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
CD9-208ENST00000538834 IGIPA6NJ69 53 aa8.78□□□□□ -1
CD9-208ENST00000538834 PANO1I0J062 215 aa8.78□□□□□ -1
CD9-208ENST00000538834 NPSP0C0P6 89 aa8.78□□□□□ -1
CD9-208ENST00000538834 S100PP25815 95 aa8.78□□□□□ -1
CD9-208ENST00000538834 XCL1P47992 114 aa8.78□□□□□ -1
CD9-208ENST00000538834 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
CD9-208ENST00000538834 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
CD9-208ENST00000538834 CIRBP-AS1Q8TBR5 109 aa8.78□□□□□ -1
CD9-208ENST00000538834 NXT2Q9NPJ8 142 aaKnown RBP8.78□□□□□ -1
CD9-208ENST00000538834 IGLV4-3A0A075B6K6 122 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 IGHV3OR16-9A0A0B4J2B5 98 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 IGHV1-58A0A0C4DH39 117 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 LOC389332A0A1B0GUA5 103 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 EPM2AB3EWF7 344 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
CD9-208ENST00000538834 MT-ND6P03923 174 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 RAB5AP20339 215 aa8.77□□□□□ -1.01
CD9-208ENST00000538834 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
CD9-208ENST00000538834 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
CD9-208ENST00000538834 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
CD9-208ENST00000538834 APOC3P02656 99 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 ORMDL2Q53FV1 153 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 Q5VSD8 79 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 LINC00173Q6ZV60 143 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 SVBPQ8N300 66 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 AMELXQ99217 191 aa8.76□□□□□ -1.01
CD9-208ENST00000538834 SNAPINO95295 136 aa8.75□□□□□ -1.01
CD9-208ENST00000538834 HIGD2BQ4VC39 106 aa8.75□□□□□ -1.01
CD9-208ENST00000538834 C2orf66Q6UXQ4 117 aa8.75□□□□□ -1.01
CD9-208ENST00000538834 AP5S1Q9NUS5 200 aa8.75□□□□□ -1.01
CD9-208ENST00000538834 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
CD9-208ENST00000538834 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.74□□□□□ -1.01
CD9-208ENST00000538834 TRAV13-1A0A0B4J241 112 aa8.74□□□□□ -1.01
CD9-208ENST00000538834 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms