RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 LPAP08519 4548 aa8.72□□□□□ -1.01
SMARCA4-206ENST00000538456 RASL11AQ6T310 242 aa8.71□□□□□ -1.02
SMARCA4-206ENST00000538456 COTL1Q14019 142 aa8.7□□□□□ -1.02
SMARCA4-206ENST00000538456 FER1L6-AS1Q8NA97 138 aa8.7□□□□□ -1.02
SMARCA4-206ENST00000538456 CHCHD10Q8WYQ3 142 aaPredicted RBP8.7□□□□□ -1.02
SMARCA4-206ENST00000538456 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
SMARCA4-206ENST00000538456 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
SMARCA4-206ENST00000538456 GVQW2A0A096LPI5 108 aaPredicted RBP8.69□□□□□ -1.02
SMARCA4-206ENST00000538456 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
SMARCA4-206ENST00000538456 YPEL4Q96NS1 127 aa8.69□□□□□ -1.02
SMARCA4-206ENST00000538456 RNASE7Q9H1E1 156 aaKnown RBP8.69□□□□□ -1.02
SMARCA4-206ENST00000538456 V9GYV3 84 aa8.69□□□□□ -1.02
SMARCA4-206ENST00000538456 GATCO43716 136 aaKnown RBP8.68□□□□□ -1.02
SMARCA4-206ENST00000538456 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
SMARCA4-206ENST00000538456 S100PP25815 95 aa8.68□□□□□ -1.02
SMARCA4-206ENST00000538456 CT83Q5H943 113 aa8.68□□□□□ -1.02
SMARCA4-206ENST00000538456 NIT2Q9NQR4 276 aa8.68□□□□□ -1.02
SMARCA4-206ENST00000538456 COLCA2A8K830 154 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 CACNG7P62955 275 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 AMMECR1LQ6DCA0 310 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 Q6ZRP5 223 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 NUDT10Q8NFP7 164 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 OR2D3Q8NGH3 330 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 LINC00526Q96FQ7 95 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 NUDT11Q96G61 164 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 LINC00474Q9P2X8 69 aa8.67□□□□□ -1.02
SMARCA4-206ENST00000538456 TRBV24-1A0A075B6N3 115 aa8.66□□□□□ -1.02
SMARCA4-206ENST00000538456 TRAV9-1A0A075B6T8 112 aa8.66□□□□□ -1.02
SMARCA4-206ENST00000538456 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-206ENST00000538456 BTF3L4Q96K17 158 aa8.66□□□□□ -1.02
SMARCA4-206ENST00000538456 RPP21Q9H633 154 aaKnown RBP8.66□□□□□ -1.02
SMARCA4-206ENST00000538456 TRGC1P0CF51 173 aa8.65□□□□□ -1.02
SMARCA4-206ENST00000538456 RPS20P60866 119 aaKnown RBP8.65□□□□□ -1.02
SMARCA4-206ENST00000538456 FOXI1Q12951 378 aa8.65□□□□□ -1.02
SMARCA4-206ENST00000538456 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 SMIM27A0A1W2PRY6 76 aa8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 A8MWL6 223 aa8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 XCL1P47992 114 aa8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 TSKUQ8WUA8 353 aa8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
SMARCA4-206ENST00000538456 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
SMARCA4-206ENST00000538456 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
SMARCA4-206ENST00000538456 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
SMARCA4-206ENST00000538456 NTF3P20783 257 aa8.63□□□□□ -1.03
SMARCA4-206ENST00000538456 LYZL1Q6UWQ5 148 aa8.63□□□□□ -1.03
SMARCA4-206ENST00000538456 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
SMARCA4-206ENST00000538456 F2Z2F3 143 aa8.62□□□□□ -1.03
SMARCA4-206ENST00000538456 RAB5AP20339 215 aa8.62□□□□□ -1.03
SMARCA4-206ENST00000538456 MUC2Q02817 5179 aa8.62□□□□□ -1.03
SMARCA4-206ENST00000538456 XKRY2A2RUG3 117 aa8.61□□□□□ -1.03
SMARCA4-206ENST00000538456 CCL25O15444 150 aa8.61□□□□□ -1.03
SMARCA4-206ENST00000538456 FGF6P10767 208 aa8.61□□□□□ -1.03
SMARCA4-206ENST00000538456 GATD1Q8NB37 220 aa8.61□□□□□ -1.03
SMARCA4-206ENST00000538456 NAT8BQ9UHF3 227 aa8.61□□□□□ -1.03
SMARCA4-206ENST00000538456 IGHV1-58A0A0C4DH39 117 aa8.6□□□□□ -1.03
SMARCA4-206ENST00000538456 APCSP02743 223 aa8.6□□□□□ -1.03
SMARCA4-206ENST00000538456 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
SMARCA4-206ENST00000538456 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
SMARCA4-206ENST00000538456 TWIST1Q15672 202 aa8.6□□□□□ -1.03
SMARCA4-206ENST00000538456 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
SMARCA4-206ENST00000538456 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
SMARCA4-206ENST00000538456 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
SMARCA4-206ENST00000538456 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
SMARCA4-206ENST00000538456 NUP35Q8NFH5 326 aa8.59□□□□□ -1.03
SMARCA4-206ENST00000538456 OR5A1Q8NGJ0 315 aa8.59□□□□□ -1.03
SMARCA4-206ENST00000538456 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 H7C423 109 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 ZNF561-AS1K7EIQ3 104 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 NCR2O95944 276 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 MT-ND6P03923 174 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 CTRLP40313 264 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 COX19Q49B96 90 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 ATP5L2Q7Z4Y8 100 aa8.58□□□□□ -1.04
SMARCA4-206ENST00000538456 CAMPP49913 170 aa8.57□□□□□ -1.04
SMARCA4-206ENST00000538456 TMEM101Q96IK0 257 aa8.57□□□□□ -1.04
SMARCA4-206ENST00000538456 PSORS1C2Q9UIG4 136 aa8.57□□□□□ -1.04
SMARCA4-206ENST00000538456 LOC107984640A0A0U1RRK4 108 aa8.56□□□□□ -1.04
SMARCA4-206ENST00000538456 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
SMARCA4-206ENST00000538456 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
SMARCA4-206ENST00000538456 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
SMARCA4-206ENST00000538456 ZNF664Q8N3J9 261 aa8.56□□□□□ -1.04
SMARCA4-206ENST00000538456 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
SMARCA4-206ENST00000538456 A0A1B0GXF2 115 aa8.55□□□□□ -1.04
SMARCA4-206ENST00000538456 C1orf196B1AJZ1 125 aa8.55□□□□□ -1.04
SMARCA4-206ENST00000538456 C1orf137Q5JT78 98 aa8.55□□□□□ -1.04
SMARCA4-206ENST00000538456 MRPL54Q6P161 138 aaKnown RBP8.55□□□□□ -1.04
SMARCA4-206ENST00000538456 GNB1LQ9BYB4 327 aa8.55□□□□□ -1.04
SMARCA4-206ENST00000538456 TMA7Q9Y2S6 64 aaKnown RBP8.55□□□□□ -1.04
SMARCA4-206ENST00000538456 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 A0A1B0GUT8 65 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 A0A1B0GW15 77 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 RAB5BP61020 215 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 HBBP68871 147 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 SS18Q15532 418 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 C9orf116Q5BN46 136 aaPredicted RBP8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 BORCS7Q96B45 105 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 CNFNQ9BYD5 112 aa8.54□□□□□ -1.04
SMARCA4-206ENST00000538456 I3L3M4 83 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms