RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 UBE2D1P51668 147 aa12.46□□□□□ -0.41
SCARB1-205ENST00000538291 M0R2N4 97 aa12.46□□□□□ -0.41
SCARB1-205ENST00000538291 PIEZO1Q92508 2521 aa12.45□□□□□ -0.42
SCARB1-205ENST00000538291 PROK1P58294 105 aa12.45□□□□□ -0.42
SCARB1-205ENST00000538291 ZNF706Q9Y5V0 76 aaPredicted RBP12.45□□□□□ -0.42
SCARB1-205ENST00000538291 DOPEY1Q5JWR5 2465 aa12.45□□□□□ -0.42
SCARB1-205ENST00000538291 LY6G6CO95867 125 aa12.45□□□□□ -0.42
SCARB1-205ENST00000538291 LELP1Q5T871 98 aa12.45□□□□□ -0.42
SCARB1-205ENST00000538291 CD164L2Q6UWJ8 174 aa12.45□□□□□ -0.42
SCARB1-205ENST00000538291 TRAV23DV6A0A075B6W5 121 aa12.44□□□□□ -0.42
SCARB1-205ENST00000538291 Q8N6K4 173 aa12.44□□□□□ -0.42
SCARB1-205ENST00000538291 DSCAML1Q8TD84 2053 aa12.44□□□□□ -0.42
SCARB1-205ENST00000538291 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
SCARB1-205ENST00000538291 ZNF295-AS1Q8N0V1 137 aa12.44□□□□□ -0.42
SCARB1-205ENST00000538291 PLA2G2AP14555 144 aa12.43□□□□□ -0.42
SCARB1-205ENST00000538291 MBD6Q96DN6 1003 aa12.43□□□□□ -0.42
SCARB1-205ENST00000538291 J3KT08 172 aa12.43□□□□□ -0.42
SCARB1-205ENST00000538291 PYGO1Q9Y3Y4 419 aa12.43□□□□□ -0.42
SCARB1-205ENST00000538291 C6orf99Q4VX62 202 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 CRIP3Q6Q6R5 217 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 C9orf85Q96MD7 179 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 TRBV27A0A0K0K1C4 114 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 CRIP1P50238 77 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 ABCA2Q9BZC7 2435 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 TRBV6-5A0A0K0K1A5 114 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 SLPIP03973 132 aa12.42□□□□□ -0.42
SCARB1-205ENST00000538291 OBSL1O75147 1896 aa12.41□□□□□ -0.42
SCARB1-205ENST00000538291 C18orf65Q6ZTR6 163 aa12.41□□□□□ -0.42
SCARB1-205ENST00000538291 DENND4AQ7Z401 1863 aa12.4□□□□□ -0.42
SCARB1-205ENST00000538291 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.42
SCARB1-205ENST00000538291 IGKV2D-28P01615 120 aa12.4□□□□□ -0.42
SCARB1-205ENST00000538291 IGLV1-40P01703 118 aa12.4□□□□□ -0.42
SCARB1-205ENST00000538291 DCANP1Q8TF63 244 aa12.4□□□□□ -0.42
SCARB1-205ENST00000538291 C1orf158Q8N1D5 194 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 LOC107984640A0A0U1RRK4 108 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 NCOR2Q9Y618 2525 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 M0R378 163 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 CCKP06307 115 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 DHRS4-AS1Q9P1J3 65 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 ATP5EP2Q5VTU8 51 aa12.39□□□□□ -0.43
SCARB1-205ENST00000538291 SCXQ7RTU7 201 aa12.38□□□□□ -0.43
SCARB1-205ENST00000538291 PPDPFQ9H3Y8 114 aa12.38□□□□□ -0.43
SCARB1-205ENST00000538291 UBE2D4Q9Y2X8 147 aa12.38□□□□□ -0.43
SCARB1-205ENST00000538291 OXLD1Q5BKU9 147 aa12.37□□□□□ -0.43
SCARB1-205ENST00000538291 SPINK6Q6UWN8 80 aa12.37□□□□□ -0.43
SCARB1-205ENST00000538291 U3KQK5 164 aa12.37□□□□□ -0.43
SCARB1-205ENST00000538291 KLLNB2CW77 178 aa12.37□□□□□ -0.43
SCARB1-205ENST00000538291 RNASE3P12724 160 aaKnown RBP12.37□□□□□ -0.43
SCARB1-205ENST00000538291 WFDC10BQ8IUB3 73 aa12.37□□□□□ -0.43
SCARB1-205ENST00000538291 NDUFA7O95182 113 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 LOC100131303A0A0U1RQF7 123 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 TSHBP01222 138 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 Q6ZS46 218 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 LINC00526Q96FQ7 95 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
SCARB1-205ENST00000538291 COL4A4P53420 1690 aaPredicted RBP12.35□□□□□ -0.43
SCARB1-205ENST00000538291 A0A0J9YWU9 116 aa12.35□□□□□ -0.43
SCARB1-205ENST00000538291 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
SCARB1-205ENST00000538291 G3V4G9 280 aa12.35□□□□□ -0.43
SCARB1-205ENST00000538291 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
SCARB1-205ENST00000538291 IGHV4-30-4P0DP06 118 aa12.35□□□□□ -0.43
SCARB1-205ENST00000538291 SDIM1Q6ZPB5 146 aa12.35□□□□□ -0.43
SCARB1-205ENST00000538291 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
SCARB1-205ENST00000538291 MED12LQ86YW9 2145 aa12.34□□□□□ -0.43
SCARB1-205ENST00000538291 ARHGAP21Q5T5U3 1957 aa12.34□□□□□ -0.43
SCARB1-205ENST00000538291 TIMM17BO60830 172 aa12.34□□□□□ -0.43
SCARB1-205ENST00000538291 K7ERS5 55 aa12.34□□□□□ -0.43
SCARB1-205ENST00000538291 TRIAP1O43715 76 aa12.34□□□□□ -0.43
SCARB1-205ENST00000538291 TRBV30A0A0K0K1B3 111 aa12.33□□□□□ -0.43
SCARB1-205ENST00000538291 IGLV2-11P01706 119 aa12.33□□□□□ -0.43
SCARB1-205ENST00000538291 C20orf197Q8N268 126 aa12.33□□□□□ -0.43
SCARB1-205ENST00000538291 ENHOQ6UWT2 76 aa12.33□□□□□ -0.44
SCARB1-205ENST00000538291 UBE2D3P61077 147 aa12.33□□□□□ -0.44
SCARB1-205ENST00000538291 C3orf22Q8N5N4 141 aa12.33□□□□□ -0.44
SCARB1-205ENST00000538291 Q6ZQY7 126 aa12.32□□□□□ -0.44
SCARB1-205ENST00000538291 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
SCARB1-205ENST00000538291 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
SCARB1-205ENST00000538291 PRR9Q5T870 116 aa12.32□□□□□ -0.44
SCARB1-205ENST00000538291 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
SCARB1-205ENST00000538291 MAPKAPK5-AS1Q8N8E1 139 aa12.32□□□□□ -0.44
SCARB1-205ENST00000538291 A8MZ25 164 aa12.31□□□□□ -0.44
SCARB1-205ENST00000538291 C2CD3Q4AC94 2353 aa12.3□□□□□ -0.44
SCARB1-205ENST00000538291 PLAC8L1A1L4L8 177 aa12.3□□□□□ -0.44
SCARB1-205ENST00000538291 NUPR2A6NF83 97 aa12.3□□□□□ -0.44
SCARB1-205ENST00000538291 SVIPQ8NHG7 77 aa12.3□□□□□ -0.44
SCARB1-205ENST00000538291 ZNF106Q9H2Y7 1883 aaKnown RBP12.3□□□□□ -0.44
SCARB1-205ENST00000538291 NRACQ8N912 160 aa12.3□□□□□ -0.44
SCARB1-205ENST00000538291 AVPP01185 164 aa12.29□□□□□ -0.44
SCARB1-205ENST00000538291 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
SCARB1-205ENST00000538291 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
SCARB1-205ENST00000538291 SMR3AQ99954 134 aa12.29□□□□□ -0.44
SCARB1-205ENST00000538291 RPL37AP8A6NKH3 93 aa12.29□□□□□ -0.44
SCARB1-205ENST00000538291 COX17Q14061 63 aa12.29□□□□□ -0.44
SCARB1-205ENST00000538291 CDSNQ15517 529 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms