RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 TMEM105Q8N8V8 129 aa6.15□□□□□ -1.43
SRGAP1-202ENST00000537556 CELSR3Q9NYQ7 3312 aa6.14□□□□□ -1.43
SRGAP1-202ENST00000537556 ZNF561-AS1K7EIQ3 104 aa6.14□□□□□ -1.43
SRGAP1-202ENST00000537556 RPL36AP83881 106 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-202ENST00000537556 DYNLRB2Q8TF09 96 aa6.14□□□□□ -1.43
SRGAP1-202ENST00000537556 RPL36ALQ969Q0 106 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-202ENST00000537556 PAX4O43316 350 aa6.14□□□□□ -1.43
SRGAP1-202ENST00000537556 IGKV2-29A2NJV5 120 aaPredicted RBP6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 KLK9Q2XQG4 91 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 MRPL55Q7Z7F7 128 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 LINC00337Q8N6G1 96 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 C11orf68Q9H3H3 251 aaKnown RBP6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 KLK9Q9UKQ9 250 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 IGHV3-16A0A0C4DH30 117 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 TMEM256-PLSCR3K7ERE1 68 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 DGAT2L7PQ6IED9 249 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 CCDC140Q96MF4 163 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 SND1-IT1Q9HBX3 110 aa6.13□□□□□ -1.43
SRGAP1-202ENST00000537556 IGHV7-81A0A0B4J1V7 117 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 KALRNO60229 2985 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 DAD1P61803 113 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 FAM229BQ4G0N7 80 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 UNQ9165/PRO28630Q6UXU0 137 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 MUC6Q6W4X9 2439 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 DSPP15924 2871 aaKnown RBP6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 DEFB1P60022 68 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 ECSCRQ19T08 205 aa6.12□□□□□ -1.43
SRGAP1-202ENST00000537556 TRAV10A0A0B4J240 114 aa6.11□□□□□ -1.43
SRGAP1-202ENST00000537556 TRBV7-4A0A0J9YYF1 115 aa6.11□□□□□ -1.43
SRGAP1-202ENST00000537556 ERC2-IT1O76042 136 aa6.11□□□□□ -1.43
SRGAP1-202ENST00000537556 SLPIP03973 132 aa6.11□□□□□ -1.43
SRGAP1-202ENST00000537556 CHCHD7Q9BUK0 85 aa6.11□□□□□ -1.43
SRGAP1-202ENST00000537556 PRRC2CQ9Y520 2896 aaKnown RBP6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 IGKV2-28A0A075B6P5 120 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 IGKV2D-28P01615 120 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 C19orf54Q5BKX5 351 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 MINOS1Q5TGZ0 78 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 LINC01547P58512 204 aaPredicted RBP6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 POLEQ07864 2286 aa6.1□□□□□ -1.43
SRGAP1-202ENST00000537556 CXCL6P80162 114 aa6.09□□□□□ -1.43
SRGAP1-202ENST00000537556 COX6A2Q02221 97 aa6.09□□□□□ -1.43
SRGAP1-202ENST00000537556 Q8N6K4 173 aa6.09□□□□□ -1.43
SRGAP1-202ENST00000537556 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
SRGAP1-202ENST00000537556 ABCA4P78363 2273 aa6.09□□□□□ -1.43
SRGAP1-202ENST00000537556 HAMPP81172 84 aa6.09□□□□□ -1.43
SRGAP1-202ENST00000537556 FUSP35637 526 aaKnown RBP eCLIP6.09□□□□□ -1.44
SRGAP1-202ENST00000537556 LINC00242Q5T6M2 205 aa6.09□□□□□ -1.44
SRGAP1-202ENST00000537556 PIEZO1Q92508 2521 aa6.09□□□□□ -1.44
SRGAP1-202ENST00000537556 DCHS1Q96JQ0 3298 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 FAM19A3Q7Z5A8 133 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 Q8N3U1 123 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 LINC00467Q9BRT7 94 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 ZDBF2Q9HCK1 2354 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 IGHV1OR15-1A0A075B7D0 117 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 TM2D3Q9BRN9 247 aa6.08□□□□□ -1.44
SRGAP1-202ENST00000537556 SEM1Q6ZVN7 128 aa6.07□□□□□ -1.44
SRGAP1-202ENST00000537556 Q8N9W7 124 aa6.07□□□□□ -1.44
SRGAP1-202ENST00000537556 IGHV3-38A0A0C4DH36 116 aa6.07□□□□□ -1.44
SRGAP1-202ENST00000537556 ATP6V0E1O15342 81 aa6.07□□□□□ -1.44
SRGAP1-202ENST00000537556 NREPQ16612 68 aa6.07□□□□□ -1.44
SRGAP1-202ENST00000537556 Q1T7F1 81 aa6.07□□□□□ -1.44
SRGAP1-202ENST00000537556 IGHV3OR16-12A0A075B7B8 117 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 ODF3BA8MYP8 253 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 NDUFA4O00483 81 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 CEP250Q9BV73 2442 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 PTPRQQ9UMZ3 2332 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 IGKV3-7A0A075B6H7 116 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 A0A087WZ39 114 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 PRYO14603 147 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 Q6ZTI0 123 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 C22orf34Q6ZV56 151 aa6.06□□□□□ -1.44
SRGAP1-202ENST00000537556 LINC00158P58513 81 aa6.05□□□□□ -1.44
SRGAP1-202ENST00000537556 Q6ZVQ6 151 aa6.05□□□□□ -1.44
SRGAP1-202ENST00000537556 Q8N814 137 aa6.05□□□□□ -1.44
SRGAP1-202ENST00000537556 CACNA1HO95180 2353 aa6.05□□□□□ -1.44
SRGAP1-202ENST00000537556 IGHV3-73A0A0B4J1V6 119 aa6.05□□□□□ -1.44
SRGAP1-202ENST00000537556 CCL18P55774 89 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 C6orf223Q8N319 242 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 TPRP12270 2363 aaKnown RBP6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 LOC110117498A0A087WWA1 95 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 G3V318 75 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 BSPH1Q075Z2 132 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 Q6ZQT0 140 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 Q6ZTC4 211 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 MINOS1-NBL1R4GNA1 71 aa6.04□□□□□ -1.44
SRGAP1-202ENST00000537556 E7EQL1 145 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 PDE6GP18545 87 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 LYRM9A8MSI8 78 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 LY6G6DO95868 133 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 TRBV6-4A0A1B0GX49 114 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 BPY2O14599 106 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 STHQ8IWL8 128 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 RHPN1-AS1Q9BWJ2 59 aa6.03□□□□□ -1.44
SRGAP1-202ENST00000537556 RNASE1P07998 156 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 417.6 ms