RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 IGHV3OR16-13A0A075B7E8 117 aa7.37□□□□□ -1.23
RFX4-204ENST00000536688 IGHV3-74A0A0B4J1X5 117 aa7.37□□□□□ -1.23
RFX4-204ENST00000536688 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
RFX4-204ENST00000536688 CRPP02741 224 aa7.37□□□□□ -1.23
RFX4-204ENST00000536688 MINOS1Q5TGZ0 78 aa7.37□□□□□ -1.23
RFX4-204ENST00000536688 C1orf158Q8N1D5 194 aa7.37□□□□□ -1.23
RFX4-204ENST00000536688 TRAV23DV6A0A075B6W5 121 aa7.36□□□□□ -1.23
RFX4-204ENST00000536688 IGFL2Q6UWQ7 119 aa7.36□□□□□ -1.23
RFX4-204ENST00000536688 ZNF625Q96I27 306 aaPredicted RBP7.36□□□□□ -1.23
RFX4-204ENST00000536688 TRBV7-6A0A0J9YX20 115 aa7.36□□□□□ -1.23
RFX4-204ENST00000536688 HILS1P60008 231 aa7.36□□□□□ -1.23
RFX4-204ENST00000536688 CDKN2A-AS1Q9UH64 79 aa7.36□□□□□ -1.23
RFX4-204ENST00000536688 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
RFX4-204ENST00000536688 USP9XQ93008 2570 aaPredicted RBP7.35□□□□□ -1.23
RFX4-204ENST00000536688 IGHV3-49A0A0A0MS15 119 aa7.35□□□□□ -1.23
RFX4-204ENST00000536688 BLCAPP62952 87 aa7.35□□□□□ -1.23
RFX4-204ENST00000536688 PRB3Q04118 309 aaPredicted RBP7.35□□□□□ -1.23
RFX4-204ENST00000536688 MINOS1-NBL1R4GNA1 71 aa7.35□□□□□ -1.23
RFX4-204ENST00000536688 CDSNQ15517 529 aa7.34□□□□□ -1.23
RFX4-204ENST00000536688 Q8N9W7 124 aa7.34□□□□□ -1.23
RFX4-204ENST00000536688 AKAP13Q12802 2813 aa7.34□□□□□ -1.23
RFX4-204ENST00000536688 A0A087WYN8 130 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 C22orf34Q6ZV56 151 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 CHCHD7Q9BUK0 85 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 NDUFA4O00483 81 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 RBM3P98179 157 aaKnown RBP7.33□□□□□ -1.24
RFX4-204ENST00000536688 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 WNK2Q9Y3S1 2297 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 CELSR3Q9NYQ7 3312 aa7.33□□□□□ -1.24
RFX4-204ENST00000536688 IBA57-AS1B1ANH7 110 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 ENHOQ6UWT2 76 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 LINC00167Q96N53 147 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 FAM215AQ9Y5M1 114 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.32□□□□□ -1.24
RFX4-204ENST00000536688 NCR3O14931 201 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 HOXD3P31249 432 aaPredicted RBP7.32□□□□□ -1.24
RFX4-204ENST00000536688 PRR15Q8IV56 129 aa7.32□□□□□ -1.24
RFX4-204ENST00000536688 CEP295Q9C0D2 2601 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 F8WEM9 126 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 BSPH1Q075Z2 132 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 SS18Q15532 418 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 PIK3CD-AS1Q5SR53 167 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 LINC00482Q8N8I6 264 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
RFX4-204ENST00000536688 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 ECSCRQ19T08 205 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 C19orf54Q5BKX5 351 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 LINC00337Q8N6G1 96 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 ASPMQ8IZT6 3477 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 ZZEF1O43149 2961 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 IGKV2-29A2NJV5 120 aaPredicted RBP7.3□□□□□ -1.24
RFX4-204ENST00000536688 F6UB75 175 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 ATP6V0E1O15342 81 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 PMAIP1Q13794 54 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 Q6ZRU5 148 aa7.3□□□□□ -1.24
RFX4-204ENST00000536688 IGHV1OR15-1A0A075B7D0 117 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 LECT2O14960 151 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 RNASE13Q5GAN3 156 aaKnown RBP7.29□□□□□ -1.24
RFX4-204ENST00000536688 LINC00474Q9P2X8 69 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 ABCA4P78363 2273 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 IGF2RP11717 2491 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 IGKV2-28A0A075B6P5 120 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 PLAC8L1A1L4L8 177 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 IGKV2D-28P01615 120 aa7.29□□□□□ -1.24
RFX4-204ENST00000536688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.29□□□□□ -1.24
RFX4-204ENST00000536688 ZFYVE26Q68DK2 2539 aa7.28□□□□□ -1.24
RFX4-204ENST00000536688 LINC00242Q5T6M2 205 aa7.28□□□□□ -1.24
RFX4-204ENST00000536688 TMEM256-PLSCR3K7ERE1 68 aa7.27□□□□□ -1.24
RFX4-204ENST00000536688 DEFB1P60022 68 aa7.27□□□□□ -1.24
RFX4-204ENST00000536688 FDCSPQ8NFU4 85 aa7.27□□□□□ -1.24
RFX4-204ENST00000536688 SND1-IT1Q9HBX3 110 aa7.27□□□□□ -1.24
RFX4-204ENST00000536688 COX6A2Q02221 97 aa7.27□□□□□ -1.25
RFX4-204ENST00000536688 LINC00467Q9BRT7 94 aa7.27□□□□□ -1.25
RFX4-204ENST00000536688 IGHV3OR16-12A0A075B7B8 117 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 LY6G6DO95868 133 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 WFDC9Q8NEX5 89 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 RMI2Q96E14 147 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 TRBV7-4A0A0J9YYF1 115 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 CXCL6P80162 114 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 DEFB109BQ30KR1 87 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 SIRPDQ9H106 197 aa7.26□□□□□ -1.25
RFX4-204ENST00000536688 DSPP15924 2871 aaKnown RBP7.26□□□□□ -1.25
RFX4-204ENST00000536688 MIFP14174 115 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
RFX4-204ENST00000536688 DGAT2L7PQ6IED9 249 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
RFX4-204ENST00000536688 APC2O95996 2303 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 ANKRD17O75179 2603 aaKnown RBP7.25□□□□□ -1.25
RFX4-204ENST00000536688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
RFX4-204ENST00000536688 E7EQL1 145 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 CD164Q04900 197 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 SNURFQ9Y675 71 aa7.25□□□□□ -1.25
RFX4-204ENST00000536688 DMXL2Q8TDJ6 3036 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms