RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TIMM17BO60830 172 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 PRB2P02812 416 aaPredicted RBP2.73□□□□□ -1.97
MCF2-210ENST00000536274 ZNF833PQ6ZTB9 187 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 PLA2G2DQ9UNK4 145 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 TLN1Q9Y490 2541 aaKnown RBP2.73□□□□□ -1.97
MCF2-210ENST00000536274 IGKV3D-15A0A087WSY6 115 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 H7BZZ5 65 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 LEPROTO15243 131 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 S100A4P26447 101 aaKnown RBP2.73□□□□□ -1.97
MCF2-210ENST00000536274 SNRPD3P62318 126 aaKnown RBP2.73□□□□□ -1.97
MCF2-210ENST00000536274 VMA21Q3ZAQ7 101 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 ENHOQ6UWT2 76 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 TMEM61Q8N0U2 210 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 GAFA1Q96PS6 74 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 ABCA12Q86UK0 2595 aa2.73□□□□□ -1.97
MCF2-210ENST00000536274 SPTA1P02549 2419 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 TRAV12-2A0A075B6T6 113 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 F6UB75 175 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 F8WEM9 126 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 RNASE1P07998 156 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 CXCL5P42830 114 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 ZNF876PQ49A33 203 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 LYPD2Q6UXB3 125 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 VPS13CQ709C8 3753 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 ANKRD17O75179 2603 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 FLNBO75369 2602 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 PIEZO2Q9H5I5 2752 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 PDZD2O15018 2839 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 RBMY1BA6NDE4 496 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 RBMY1EA6NEQ0 496 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 ACYP1P07311 99 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 RBMY1DP0C7P1 496 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 RBMY1A1P0DJD3 496 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 RBMY1CP0DJD4 496 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 RBMY1FQ15415 496 aaKnown RBP2.72□□□□□ -1.97
MCF2-210ENST00000536274 NDUFA12Q9UI09 145 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 A0A087WYN8 130 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 IGHV3-73A0A0B4J1V6 119 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 TRBV7-6A0A0J9YX20 115 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 DNAL4O96015 105 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 VMO1Q7Z5L0 202 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 PRIMA1Q86XR5 153 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 LINC01600Q96MT4 127 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 Q9UF83 564 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 PHLDA3Q9Y5J5 127 aa2.72□□□□□ -1.97
MCF2-210ENST00000536274 MYO9AB2RTY4 2548 aa2.71□□□□□ -1.97
MCF2-210ENST00000536274 TRAV10A0A0B4J240 114 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 TMEM89A2RUT3 159 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 SDHAF1A6NFY7 115 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 COX7A1P24310 79 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 DEFB113Q30KQ7 82 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 BEAN1Q3B7T3 259 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 PIK3CD-AS1Q5SR53 167 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 TTTY12Q9BZ98 90 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 UBE2D4Q9Y2X8 147 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 SERP1Q9Y6X1 66 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 IGKV3-15P01624 115 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 INAFM2P0DMQ5 153 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 SUMO4Q6EEV6 95 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 LYPD1Q8N2G4 141 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 SLC25A15Q9Y619 301 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 FBN2P35556 2912 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 USP9XQ93008 2570 aaPredicted RBP2.71□□□□□ -1.98
MCF2-210ENST00000536274 NAV2Q8IVL1 2488 aa2.71□□□□□ -1.98
MCF2-210ENST00000536274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.71□□□□□ -1.98
MCF2-210ENST00000536274 IGHV1-18A0A0C4DH31 117 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 KNCNA6PVL3 124 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 BUB3O43684 328 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 CCKP06307 115 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 RNASE4P34096 147 aaKnown RBP2.7□□□□□ -1.98
MCF2-210ENST00000536274 PMAIP1Q13794 54 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 MIAQ16674 131 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 HECTD1Q9ULT8 2610 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 NBPF19A0A087WUL8 3843 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 C2CD3Q4AC94 2353 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 TRBV27A0A0K0K1C4 114 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 M0R1B8 84 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 COX7A2LO14548 114 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 Q6ZTI0 123 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 C11orf45Q8TAV5 145 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 SPRR3Q9UBC9 169 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 MOB4Q9Y3A3 225 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 HIVEP3Q5T1R4 2406 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 SMIM26A0A096LP01 95 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 C19orf84I3L1E1 186 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 UNQ9165/PRO28630Q6UXU0 137 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 C20orf173Q96LM9 149 aa2.7□□□□□ -1.98
MCF2-210ENST00000536274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.69□□□□□ -1.98
MCF2-210ENST00000536274 PROK1P58294 105 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 SCXQ7RTU7 201 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.69□□□□□ -1.98
MCF2-210ENST00000536274 DYNLRB1Q9NP97 96 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 OTOGQ6ZRI0 2925 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 IGLV4-3A0A075B6K6 122 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 EPM2AB3EWF7 344 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 IGKV3-20P01619 116 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 IGHG2P01859 326 aa2.69□□□□□ -1.98
MCF2-210ENST00000536274 PRM2P04554 102 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms