RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 CLRN3Q8NCR9 226 aa14.43□□□□□ -0.1
SSPN-204ENST00000535504 USP17L23D6RBM5 183 aa14.42□□□□□ -0.1
SSPN-204ENST00000535504 WFDC2Q14508 124 aa14.42□□□□□ -0.1
SSPN-204ENST00000535504 SNAPINO95295 136 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 APOC3P02656 99 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 SS18Q15532 418 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 CFAP161Q6P656 301 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 SVBPQ8N300 66 aa14.41□□□□□ -0.1
SSPN-204ENST00000535504 ZNF664Q8N3J9 261 aa14.39□□□□□ -0.11
SSPN-204ENST00000535504 AP5S1Q9NUS5 200 aa14.39□□□□□ -0.11
SSPN-204ENST00000535504 CSDC2Q9Y534 153 aaKnown RBP14.39□□□□□ -0.11
SSPN-204ENST00000535504 LOC389332A0A1B0GUA5 103 aa14.38□□□□□ -0.11
SSPN-204ENST00000535504 GAGE12HA6NDE8 117 aa14.38□□□□□ -0.11
SSPN-204ENST00000535504 CHCHD10Q8WYQ3 142 aaPredicted RBP14.38□□□□□ -0.11
SSPN-204ENST00000535504 TIMM21Q9BVV7 248 aa14.37□□□□□ -0.11
SSPN-204ENST00000535504 CDC42SE2Q9NRR3 84 aa14.37□□□□□ -0.11
SSPN-204ENST00000535504 DYNC1H1Q14204 4646 aaKnown RBP14.37□□□□□ -0.11
SSPN-204ENST00000535504 MT-ND6P03923 174 aa14.36□□□□□ -0.11
SSPN-204ENST00000535504 GNB1LQ9BYB4 327 aa14.36□□□□□ -0.11
SSPN-204ENST00000535504 UBE2D4Q9Y2X8 147 aa14.36□□□□□ -0.11
SSPN-204ENST00000535504 CCL25O15444 150 aa14.35□□□□□ -0.11
SSPN-204ENST00000535504 KRTAP10-1P60331 282 aa14.35□□□□□ -0.11
SSPN-204ENST00000535504 NXT2Q9NPJ8 142 aaKnown RBP14.35□□□□□ -0.11
SSPN-204ENST00000535504 SPANXA1Q9NS26 97 aa14.35□□□□□ -0.11
SSPN-204ENST00000535504 LINC00959A0A1B0GUT2 108 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 hDV102S1A0JD36 115 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 PRSS47A8MTI9 375 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 G0S2P27469 103 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 IFI27P40305 119 aaPredicted RBP14.34□□□□□ -0.11
SSPN-204ENST00000535504 KRTAP26-1Q6PEX3 210 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 Q8N8P6 123 aa14.34□□□□□ -0.11
SSPN-204ENST00000535504 K7EMI3 77 aa14.33□□□□□ -0.12
SSPN-204ENST00000535504 XCL1P47992 114 aa14.33□□□□□ -0.12
SSPN-204ENST00000535504 ORMDL2Q53FV1 153 aa14.33□□□□□ -0.12
SSPN-204ENST00000535504 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.32□□□□□ -0.12
SSPN-204ENST00000535504 C1orf196B1AJZ1 125 aa14.32□□□□□ -0.12
SSPN-204ENST00000535504 RPL39P62891 51 aaKnown RBP14.31□□□□□ -0.12
SSPN-204ENST00000535504 PRSS1P07477 247 aa14.3□□□□□ -0.12
SSPN-204ENST00000535504 KIAA1644Q3SXP7 199 aa14.3□□□□□ -0.12
SSPN-204ENST00000535504 TRAV13-1A0A0B4J241 112 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 FABP9Q0Z7S8 132 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 CD164L2Q6UWJ8 174 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 Q6ZUT4 128 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 CYSLTR1Q9Y271 337 aa14.29□□□□□ -0.12
SSPN-204ENST00000535504 MALP21145 153 aa14.28□□□□□ -0.12
SSPN-204ENST00000535504 RNASE13Q5GAN3 156 aaKnown RBP14.28□□□□□ -0.12
SSPN-204ENST00000535504 PRSS3P2Q8NHM4 247 aa14.28□□□□□ -0.12
SSPN-204ENST00000535504 MRPS36P82909 103 aaKnown RBP14.27□□□□□ -0.13
SSPN-204ENST00000535504 Q6ZN92 141 aa14.27□□□□□ -0.13
SSPN-204ENST00000535504 MRPL18Q9H0U6 180 aaKnown RBP14.27□□□□□ -0.13
SSPN-204ENST00000535504 KIAA1109Q2LD37 5005 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 IGHV1-58A0A0C4DH39 117 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 IFITM10A6NMD0 228 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 FOXI1Q12951 378 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 PYGO1Q9Y3Y4 419 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 TRAPPC1Q9Y5R8 145 aa14.25□□□□□ -0.13
SSPN-204ENST00000535504 LRP1BQ9NZR2 4599 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 COX7A2LO14548 114 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 C2orf66Q6UXQ4 117 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 TMEM141Q96I45 108 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 C2orf88Q9BSF0 95 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 SMCO4Q9NRQ5 59 aa14.24□□□□□ -0.13
SSPN-204ENST00000535504 TGIF2-C20orf24A0A0A6YYL0 155 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 APOMO95445 188 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 CNBPP62633 177 aaKnown RBP14.23□□□□□ -0.13
SSPN-204ENST00000535504 LINC01620Q4KN68 170 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 HIGD2BQ4VC39 106 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 PAPPA-AS1Q5QFB9 102 aa14.23□□□□□ -0.13
SSPN-204ENST00000535504 LINC01549A6NIU2 74 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 ZNF561-AS1K7EIQ3 104 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 TEX43Q6ZNM6 134 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 FA2HQ7L5A8 372 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 C9orf163Q8N9P6 203 aa14.22□□□□□ -0.13
SSPN-204ENST00000535504 IGHV3-64A0A075B6Q5 118 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 XGP55808 180 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 Q8N1X5 172 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 C15orf56Q8N910 161 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 ALKBH7Q9BT30 221 aaPredicted RBP14.21□□□□□ -0.13
SSPN-204ENST00000535504 PKIGQ9Y2B9 76 aa14.21□□□□□ -0.13
SSPN-204ENST00000535504 DNAH5Q8TE73 4624 aa14.2□□□□□ -0.14
SSPN-204ENST00000535504 GVQW2A0A096LPI5 108 aaPredicted RBP14.2□□□□□ -0.14
SSPN-204ENST00000535504 NPSP0C0P6 89 aa14.2□□□□□ -0.14
SSPN-204ENST00000535504 OPRPNQ99935 248 aaPredicted RBP14.19□□□□□ -0.14
SSPN-204ENST00000535504 VCX2Q9H322 139 aa14.19□□□□□ -0.14
SSPN-204ENST00000535504 IGLV4-3A0A075B6K6 122 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 EPM2AB3EWF7 344 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 FAM229AH3BQW9 127 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 Q6ZSA8 131 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 FAM30AQ9NZY2 134 aa14.17□□□□□ -0.14
SSPN-204ENST00000535504 HERC2O95714 4834 aa14.16□□□□□ -0.14
SSPN-204ENST00000535504 C5orf38Q86SI9 138 aa14.16□□□□□ -0.14
SSPN-204ENST00000535504 SLC7A5P1Q8MH63 180 aa14.15□□□□□ -0.14
SSPN-204ENST00000535504 DPH3Q96FX2 82 aa14.15□□□□□ -0.14
SSPN-204ENST00000535504 RAB5BP61020 215 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 HAMPP81172 84 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 TOMM6Q96B49 74 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 SCGB3A1Q96QR1 104 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 TIMM17AQ99595 171 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 CHAC1Q9BUX1 264 aa14.14□□□□□ -0.15
SSPN-204ENST00000535504 SEC11AP67812 179 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms