RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 GAGE7O76087 117 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 COX6CP09669 75 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 RBMY1DP0C7P1 496 aaKnown RBP9.73□□□□□ -0.85
HDAC4-214ENST00000535493 GAGE12FP0CL80 117 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 GAGE12GP0CL81 117 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 GAGE12IP0CL82 117 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 GAGE4Q13068 117 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 IGHV3OR16-12A0A075B7B8 117 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 SLURP1P55000 103 aa9.73□□□□□ -0.85
HDAC4-214ENST00000535493 TRGV11A0A075B6L2 103 aa9.72□□□□□ -0.85
HDAC4-214ENST00000535493 NBEAL2Q6ZNJ1 2754 aa9.72□□□□□ -0.85
HDAC4-214ENST00000535493 Q8N2B8 174 aa9.72□□□□□ -0.85
HDAC4-214ENST00000535493 CITED2Q99967 270 aaPredicted RBP9.72□□□□□ -0.85
HDAC4-214ENST00000535493 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
HDAC4-214ENST00000535493 TMEM101Q96IK0 257 aa9.71□□□□□ -0.85
HDAC4-214ENST00000535493 SETXQ7Z333 2677 aaKnown RBP9.71□□□□□ -0.86
HDAC4-214ENST00000535493 LST1O00453 97 aa9.71□□□□□ -0.86
HDAC4-214ENST00000535493 Q9H8V8 135 aa9.71□□□□□ -0.86
HDAC4-214ENST00000535493 M0QXV9 152 aa9.7□□□□□ -0.86
HDAC4-214ENST00000535493 SPANXDQ9BXN6 97 aa9.7□□□□□ -0.86
HDAC4-214ENST00000535493 SPANXCQ9NY87 97 aa9.7□□□□□ -0.86
HDAC4-214ENST00000535493 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
HDAC4-214ENST00000535493 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
HDAC4-214ENST00000535493 TINCRA0A1B0GVN0 87 aa9.7□□□□□ -0.86
HDAC4-214ENST00000535493 DGAT2L7PQ6IED9 249 aa9.7□□□□□ -0.86
HDAC4-214ENST00000535493 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
HDAC4-214ENST00000535493 LINC01587Q99440 93 aa9.69□□□□□ -0.86
HDAC4-214ENST00000535493 IGHV3-53P01767 116 aa9.69□□□□□ -0.86
HDAC4-214ENST00000535493 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
HDAC4-214ENST00000535493 PIEZO1Q92508 2521 aa9.68□□□□□ -0.86
HDAC4-214ENST00000535493 UCNP55089 124 aa9.68□□□□□ -0.86
HDAC4-214ENST00000535493 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
HDAC4-214ENST00000535493 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
HDAC4-214ENST00000535493 MEIG1Q5JSS6 88 aa9.67□□□□□ -0.86
HDAC4-214ENST00000535493 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
HDAC4-214ENST00000535493 XCL2Q9UBD3 114 aa9.67□□□□□ -0.86
HDAC4-214ENST00000535493 H3BT86 120 aa9.66□□□□□ -0.86
HDAC4-214ENST00000535493 PIK3CD-AS1Q5SR53 167 aa9.66□□□□□ -0.86
HDAC4-214ENST00000535493 LINC00308Q8TCZ7 52 aa9.66□□□□□ -0.86
HDAC4-214ENST00000535493 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.86
HDAC4-214ENST00000535493 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
HDAC4-214ENST00000535493 B4DSR2 109 aa9.64□□□□□ -0.87
HDAC4-214ENST00000535493 SMCR5Q8TEV8 140 aa9.64□□□□□ -0.87
HDAC4-214ENST00000535493 IGKV3OR2-268A0A0C4DH90 116 aa9.64□□□□□ -0.87
HDAC4-214ENST00000535493 Q9HAA7 133 aa9.64□□□□□ -0.87
HDAC4-214ENST00000535493 MTORP42345 2549 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 PRIMA1Q86XR5 153 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 C11orf44Q8N8P7 122 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 FAM218AQ96MZ4 157 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 YAE1D1Q9NRH1 226 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 FAM236AA0A1B0GUQ0 79 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 FAM236BA0A1B0GV22 79 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 NDUFA1O15239 70 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 ZNF462Q96JM2 2506 aa9.63□□□□□ -0.87
HDAC4-214ENST00000535493 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
HDAC4-214ENST00000535493 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
HDAC4-214ENST00000535493 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
HDAC4-214ENST00000535493 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
HDAC4-214ENST00000535493 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
HDAC4-214ENST00000535493 TRGV1A0A0A0MS02 117 aa9.62□□□□□ -0.87
HDAC4-214ENST00000535493 RS1O15537 224 aa9.62□□□□□ -0.87
HDAC4-214ENST00000535493 HERV-K104P63124 156 aa9.62□□□□□ -0.87
HDAC4-214ENST00000535493 Q6Q795 121 aa9.62□□□□□ -0.87
HDAC4-214ENST00000535493 GCN1Q92616 2671 aaKnown RBP9.61□□□□□ -0.87
HDAC4-214ENST00000535493 TMEM89A2RUT3 159 aa9.61□□□□□ -0.87
HDAC4-214ENST00000535493 SMIM1B2RUZ4 78 aa9.61□□□□□ -0.87
HDAC4-214ENST00000535493 LINC01600Q96MT4 127 aa9.61□□□□□ -0.87
HDAC4-214ENST00000535493 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
HDAC4-214ENST00000535493 NTM-AS1Q6ZSK4 140 aa9.6□□□□□ -0.87
HDAC4-214ENST00000535493 ZNF702PQ9H963 129 aa9.6□□□□□ -0.87
HDAC4-214ENST00000535493 MAP6D1Q9H9H5 199 aa9.6□□□□□ -0.87
HDAC4-214ENST00000535493 BAALC-AS2P0C853 105 aa9.59□□□□□ -0.87
HDAC4-214ENST00000535493 Q96MF0 132 aa9.59□□□□□ -0.87
HDAC4-214ENST00000535493 APCP25054 2843 aa9.59□□□□□ -0.87
HDAC4-214ENST00000535493 COX7A2LO14548 114 aa9.59□□□□□ -0.87
HDAC4-214ENST00000535493 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
HDAC4-214ENST00000535493 ACANP16112 2415 aa9.58□□□□□ -0.88
HDAC4-214ENST00000535493 Q6ZTI0 123 aa9.58□□□□□ -0.88
HDAC4-214ENST00000535493 EDA2RQ9HAV5 297 aa9.58□□□□□ -0.88
HDAC4-214ENST00000535493 PLA2G2AP14555 144 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 TIRAPP58753 221 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 C9orf129Q5T035 196 aaKnown RBP9.57□□□□□ -0.88
HDAC4-214ENST00000535493 C22orf24Q9Y442 160 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 TIMM17BO60830 172 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 HERVK_113P63121 156 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 VPREB3Q9UKI3 123 aa9.57□□□□□ -0.88
HDAC4-214ENST00000535493 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
HDAC4-214ENST00000535493 GAGE2AQ6NT46 116 aa9.56□□□□□ -0.88
HDAC4-214ENST00000535493 LOC100131303A0A0U1RQF7 123 aa9.56□□□□□ -0.88
HDAC4-214ENST00000535493 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
HDAC4-214ENST00000535493 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
HDAC4-214ENST00000535493 RNF152Q8N8N0 203 aa9.55□□□□□ -0.88
HDAC4-214ENST00000535493 INSP01308 110 aa9.54□□□□□ -0.88
HDAC4-214ENST00000535493 BEAN1Q3B7T3 259 aa9.54□□□□□ -0.88
HDAC4-214ENST00000535493 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms